==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 12-APR-11 2LC2 . COMPND 2 MOLECULE: AVR3A4; . SOURCE 2 ORGANISM_SCIENTIFIC: PHYTOPHTHORA CAPSICI; . AUTHOR H.LI,S.KOSHIBA,T.YAENO,M.SATO,S.WATANABE,T.HARADA,K.SHIRASU, . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10321.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 44 40.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 141 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 93.8 4.0 -77.0 14.6 2 2 A S - 0 0 124 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.942 360.0-167.9-128.5 149.9 6.2 -73.9 14.2 3 3 A S + 0 0 133 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.831 26.9 126.0-130.6 168.7 9.2 -73.2 12.0 4 4 A G + 0 0 72 -2,-0.3 -2,-0.0 3,-0.0 0, 0.0 0.296 6.8 154.6 139.4 87.1 12.0 -70.5 11.8 5 5 A S + 0 0 123 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.857 45.8 101.1 -97.5 -50.4 15.7 -71.3 11.7 6 6 A S + 0 0 124 1,-0.1 2,-0.2 0, 0.0 0, 0.0 0.102 49.0 158.7 -34.7 147.9 17.2 -68.3 10.0 7 7 A G - 0 0 48 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.642 27.3-120.8-150.4-152.3 18.8 -65.8 12.3 8 8 A N - 0 0 170 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.945 14.9-173.6-157.5 174.9 21.3 -62.9 12.6 9 9 A V - 0 0 133 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.926 2.8-172.6-174.6 150.1 24.4 -61.8 14.3 10 10 A D - 0 0 118 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.962 11.1-174.2-155.3 134.3 26.7 -58.8 14.7 11 11 A S + 0 0 117 -2,-0.3 -1,-0.1 2,-0.0 0, 0.0 0.909 65.4 84.3 -91.7 -57.3 30.1 -58.2 16.3 12 12 A N + 0 0 139 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.225 45.4 154.7 -51.0 129.2 30.6 -54.4 16.0 13 13 A Q - 0 0 185 1,-0.4 2,-0.3 0, 0.0 -1,-0.2 0.659 52.8 -55.7-122.0 -62.9 28.9 -52.6 18.9 14 14 A N - 0 0 152 2,-0.0 -1,-0.4 0, 0.0 2,-0.3 -0.972 40.4-146.2-172.0 177.5 30.5 -49.3 19.7 15 15 A K - 0 0 173 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.972 4.5-147.5-155.0 165.4 33.6 -47.4 20.6 16 16 A A - 0 0 86 -2,-0.3 2,-1.6 2,-0.0 -2,-0.0 -0.999 22.7-124.1-142.6 143.5 35.0 -44.4 22.5 17 17 A S > + 0 0 99 -2,-0.3 3,-1.0 1,-0.1 2,-0.1 -0.604 36.1 166.1 -87.5 79.6 37.8 -42.0 22.1 18 18 A M T 3 + 0 0 190 -2,-1.6 -1,-0.1 1,-0.2 3,-0.0 -0.039 53.8 93.5 -84.1 33.2 39.6 -42.5 25.4 19 19 A L T 3 S+ 0 0 153 -2,-0.1 2,-0.3 1,-0.0 -1,-0.2 0.695 77.0 60.4 -95.7 -24.6 42.6 -40.6 24.0 20 20 A Q < - 0 0 132 -3,-1.0 2,-0.4 2,-0.0 -1,-0.0 -0.812 64.9-165.1-107.3 147.0 41.6 -37.2 25.3 21 21 A A - 0 0 72 -2,-0.3 2,-1.2 -3,-0.0 3,-0.2 -0.996 22.5-128.2-134.8 132.6 41.2 -36.3 29.0 22 22 A R + 0 0 189 -2,-0.4 3,-0.1 1,-0.2 -2,-0.0 -0.648 44.6 150.3 -81.0 96.4 39.5 -33.2 30.5 23 23 A L + 0 0 157 -2,-1.2 2,-0.3 1,-0.1 -1,-0.2 0.629 66.0 31.2 -99.0 -19.2 42.1 -31.8 32.9 24 24 A N S S- 0 0 98 -3,-0.2 2,-0.1 2,-0.0 -1,-0.1 -0.882 77.3-118.7-135.2 166.5 41.0 -28.2 32.5 25 25 A D - 0 0 137 -2,-0.3 2,-0.3 -3,-0.1 -2,-0.1 -0.436 18.6-145.0 -99.3 175.9 37.8 -26.2 31.9 26 26 A E - 0 0 151 -2,-0.1 2,-0.1 0, 0.0 -2,-0.0 -0.987 5.5-144.3-147.5 134.0 36.9 -23.8 29.1 27 27 A A + 0 0 92 -2,-0.3 2,-0.2 1,-0.1 0, 0.0 -0.296 22.0 171.4 -88.3 176.2 34.8 -20.6 29.0 28 28 A G - 0 0 81 -2,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.805 11.6-158.1-159.7-159.7 32.5 -19.4 26.2 29 29 A G - 0 0 73 -2,-0.2 2,-0.4 2,-0.0 0, 0.0 -0.973 19.1-119.6 177.8 172.1 29.9 -16.8 25.2 30 30 A T + 0 0 120 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.891 30.1 161.8-138.4 105.9 27.0 -15.9 22.9 31 31 A R + 0 0 194 -2,-0.4 2,-0.5 2,-0.0 -2,-0.0 -0.823 10.0 154.8-127.4 92.7 27.2 -12.8 20.7 32 32 A L - 0 0 156 -2,-0.5 2,-0.9 2,-0.0 -2,-0.0 -0.919 16.8-175.0-123.3 106.2 24.7 -12.9 17.8 33 33 A L + 0 0 155 -2,-0.5 2,-0.2 2,-0.0 -2,-0.0 -0.802 39.4 112.9-103.0 94.0 23.6 -9.5 16.4 34 34 A R + 0 0 246 -2,-0.9 2,-0.3 0, 0.0 -2,-0.0 -0.734 25.1 140.4-165.2 109.8 20.9 -10.1 13.8 35 35 A V + 0 0 141 -2,-0.2 2,-0.3 0, 0.0 -2,-0.0 -0.958 7.1 147.0-156.2 134.2 17.2 -9.1 14.0 36 36 A H + 0 0 139 -2,-0.3 3,-0.1 1,-0.1 0, 0.0 -0.852 8.8 150.4-169.8 130.5 14.7 -7.8 11.5 37 37 A H S S+ 0 0 176 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.598 77.8 0.2-129.0 -44.2 10.9 -8.1 11.0 38 38 A E + 0 0 161 2,-0.0 2,-0.2 0, 0.0 -1,-0.2 -0.884 69.5 135.0-157.7 121.1 9.7 -4.9 9.4 39 39 A S - 0 0 75 -2,-0.3 2,-0.5 -3,-0.1 0, 0.0 -0.794 22.3-169.7-170.2 122.7 11.6 -1.8 8.3 40 40 A D + 0 0 143 -2,-0.2 2,-0.6 2,-0.0 -2,-0.0 -0.958 7.2 178.9-122.8 115.7 11.5 0.4 5.2 41 41 A T + 0 0 114 -2,-0.5 3,-0.1 1,-0.1 -2,-0.0 -0.928 18.4 149.8-120.2 108.7 14.2 3.0 4.6 42 42 A E >> + 0 0 144 -2,-0.6 4,-2.5 1,-0.1 3,-0.8 -0.161 21.0 135.2-127.6 38.1 14.0 5.0 1.4 43 43 A E H 3>> + 0 0 89 1,-0.2 4,-2.4 2,-0.2 5,-0.7 0.875 60.0 77.4 -53.5 -40.3 15.5 8.3 2.5 44 44 A R H 3>5S+ 0 0 221 1,-0.2 4,-0.9 2,-0.2 -1,-0.2 0.876 117.8 10.8 -35.2 -58.9 17.6 8.4 -0.7 45 45 A G H <>5S+ 0 0 21 -3,-0.8 4,-2.6 2,-0.2 5,-0.5 0.905 120.5 67.3 -90.1 -50.5 14.6 9.5 -2.7 46 46 A F H X5S+ 0 0 136 -4,-2.5 4,-0.9 1,-0.2 -3,-0.2 0.862 111.9 37.3 -35.4 -53.1 12.1 10.4 0.0 47 47 A L H >X5S+ 0 0 97 -4,-2.4 4,-2.3 -5,-0.2 3,-0.9 0.977 118.1 48.7 -66.6 -57.6 14.3 13.3 1.0 48 48 A E H 3XXS+ 0 0 57 -4,-0.9 4,-2.6 -5,-0.7 5,-0.5 0.950 103.8 58.8 -46.2 -65.1 15.4 14.3 -2.5 49 49 A K H 3X5S+ 0 0 81 -4,-2.6 4,-1.4 1,-0.3 -1,-0.3 0.810 112.3 43.6 -34.5 -40.8 11.9 14.3 -3.9 50 50 A A H X S+ 0 0 0 -4,-1.3 4,-2.1 1,-0.2 3,-1.0 0.931 102.2 57.8 -54.5 -50.1 11.2 24.3 -7.9 57 57 A K H 3X S+ 0 0 119 -4,-2.3 4,-1.0 1,-0.3 5,-0.2 0.914 104.2 51.4 -46.8 -51.8 8.4 25.7 -5.8 58 58 A A H 3X S+ 0 0 46 -4,-1.7 4,-2.3 1,-0.2 -1,-0.3 0.820 108.4 54.0 -56.9 -31.8 10.5 28.8 -5.0 59 59 A I H << S+ 0 0 4 -4,-1.3 -1,-0.2 -3,-1.0 -2,-0.2 0.910 91.7 71.3 -69.9 -43.6 11.1 29.2 -8.7 60 60 A M H < S+ 0 0 58 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.870 117.2 22.7 -37.9 -51.3 7.3 29.2 -9.5 61 61 A A H < S+ 0 0 84 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.2 0.832 129.0 50.0 -87.0 -37.3 7.1 32.6 -8.0 62 62 A D >X + 0 0 77 -4,-2.3 3,-1.2 -5,-0.2 4,-0.7 -0.747 59.1 166.3-106.9 85.0 10.8 33.5 -8.4 63 63 A P T 34 S+ 0 0 77 0, 0.0 4,-0.5 0, 0.0 -1,-0.2 0.685 74.3 67.0 -69.8 -18.5 11.7 32.8 -12.0 64 64 A N T 34 S+ 0 0 103 1,-0.2 4,-0.5 2,-0.1 -5,-0.1 0.637 96.0 56.4 -77.0 -14.4 14.9 34.8 -11.6 65 65 A K T <> S+ 0 0 86 -3,-1.2 4,-2.6 -6,-0.2 3,-0.3 0.789 82.6 85.0 -85.8 -31.3 16.1 32.1 -9.2 66 66 A A H X S+ 0 0 8 -4,-0.7 4,-2.9 1,-0.3 5,-0.3 0.873 89.5 50.7 -33.8 -62.4 15.7 29.2 -11.7 67 67 A D H > S+ 0 0 75 -4,-0.5 4,-1.8 1,-0.2 -1,-0.3 0.920 110.9 48.3 -44.3 -56.5 19.1 29.9 -13.2 68 68 A E H > S+ 0 0 101 -4,-0.5 4,-1.5 -3,-0.3 -1,-0.2 0.908 114.2 47.8 -52.7 -46.1 20.7 29.9 -9.8 69 69 A V H >X S+ 0 0 3 -4,-2.6 4,-2.2 2,-0.2 3,-1.2 0.984 103.4 58.1 -59.6 -62.0 19.0 26.6 -8.9 70 70 A Y H 3X S+ 0 0 29 -4,-2.9 4,-2.2 1,-0.3 5,-0.3 0.839 107.0 51.4 -35.8 -45.9 19.8 24.8 -12.2 71 71 A K H 3X S+ 0 0 105 -4,-1.8 4,-1.5 -5,-0.3 -1,-0.3 0.908 108.6 50.5 -61.5 -43.4 23.4 25.4 -11.3 72 72 A K H X>S+ 0 0 4 -4,-2.2 4,-1.7 2,-0.2 3,-1.3 0.991 109.2 49.6 -57.6 -68.0 21.2 20.8 -9.1 74 74 A A H 3<5S+ 0 0 39 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.809 110.3 56.0 -41.3 -35.4 23.7 20.0 -11.8 75 75 A D H 3<5S+ 0 0 142 -4,-1.5 -1,-0.3 -5,-0.3 -2,-0.2 0.910 102.4 53.5 -66.3 -43.5 26.4 20.4 -9.1 76 76 A K H <<5S- 0 0 150 -4,-1.8 -2,-0.2 -3,-1.3 -1,-0.2 0.896 120.0-108.1 -58.7 -42.2 24.7 17.8 -6.8 77 77 A G T <5 + 0 0 62 -4,-1.7 -3,-0.2 1,-0.1 -2,-0.1 0.714 62.4 152.1 115.3 38.2 24.8 15.3 -9.6 78 78 A Y < - 0 0 46 -5,-0.7 2,-0.3 4,-0.1 -1,-0.1 -0.343 22.8-161.1 -91.1 175.0 21.2 14.9 -10.7 79 79 A T > - 0 0 66 -2,-0.1 4,-2.6 1,-0.1 5,-0.3 -0.992 38.7 -95.5-156.0 154.8 19.8 13.9 -14.1 80 80 A L H > S+ 0 0 66 -2,-0.3 4,-2.5 1,-0.2 5,-0.5 0.857 121.4 58.2 -35.7 -51.1 16.6 14.1 -16.2 81 81 A T H > S+ 0 0 96 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.952 119.8 24.6 -45.6 -69.7 15.8 10.6 -15.0 82 82 A Q H > S+ 0 0 91 2,-0.2 4,-1.9 1,-0.2 5,-0.2 0.980 121.5 56.5 -62.2 -59.4 15.8 11.4 -11.3 83 83 A M H >X S+ 0 0 0 -4,-2.6 4,-2.2 1,-0.2 3,-1.6 0.897 110.9 43.2 -36.2 -67.6 15.0 15.1 -11.6 84 84 A S H 3X S+ 0 0 23 -4,-2.5 4,-1.7 1,-0.3 3,-0.3 0.928 109.5 56.6 -46.7 -55.6 11.8 14.5 -13.5 85 85 A N H 3X S+ 0 0 82 -4,-1.9 4,-0.5 -5,-0.5 -1,-0.3 0.784 111.7 45.8 -48.8 -28.5 10.8 11.7 -11.2 86 86 A F H << S+ 0 0 3 -4,-1.9 -1,-0.3 -3,-1.6 -2,-0.2 0.852 115.5 43.0 -83.6 -38.5 11.1 14.3 -8.5 87 87 A L H < S+ 0 0 8 -4,-2.2 8,-0.8 -3,-0.3 7,-0.3 0.447 95.5 88.8 -86.1 -0.9 9.2 17.0 -10.3 88 88 A K H >< + 0 0 114 -4,-1.7 3,-0.7 -5,-0.3 6,-0.3 0.995 52.8 175.5 -58.3 -71.3 6.7 14.4 -11.4 89 89 A S T 3< S- 0 0 51 -4,-0.5 3,-0.1 1,-0.2 -1,-0.1 0.840 73.0 -77.6 64.9 33.6 4.3 14.7 -8.4 90 90 A K T 3 S+ 0 0 204 1,-0.2 2,-0.3 -5,-0.2 -1,-0.2 0.876 101.4 128.8 42.1 47.4 1.9 12.2 -10.2 91 91 A T < - 0 0 67 -3,-0.7 3,-0.4 -4,-0.1 -1,-0.2 -0.970 68.2-133.8-133.2 147.8 0.8 15.1 -12.3 92 92 A A S S- 0 0 117 -2,-0.3 -3,-0.1 1,-0.3 -4,-0.0 0.115 103.2 -5.2 -84.2 22.7 0.4 15.6 -16.1 93 93 A G S S+ 0 0 57 -5,-0.3 -1,-0.3 -4,-0.0 3,-0.1 0.280 81.1 133.4 149.4 72.2 2.1 18.9 -15.8 94 94 A K S S+ 0 0 100 -3,-0.4 2,-0.5 -6,-0.3 3,-0.2 0.857 84.6 17.7-100.6 -62.0 3.0 20.3 -12.3 95 95 A Y S > S+ 0 0 15 -8,-0.8 4,-1.5 -7,-0.2 -1,-0.1 -0.568 81.5 129.4-114.1 66.8 6.5 21.6 -12.5 96 96 A D H > + 0 0 102 -2,-0.5 4,-2.7 2,-0.2 5,-0.5 0.970 67.4 53.9 -80.7 -67.3 7.1 21.9 -16.2 97 97 A R H > S+ 0 0 127 1,-0.3 4,-1.1 2,-0.2 -1,-0.1 0.793 118.6 42.2 -37.4 -34.9 8.5 25.5 -16.6 98 98 A V H > S+ 0 0 0 2,-0.2 4,-1.8 3,-0.1 -1,-0.3 0.921 115.3 46.6 -80.7 -48.8 11.0 24.4 -14.0 99 99 A Y H X S+ 0 0 67 -4,-1.5 4,-2.1 2,-0.2 -2,-0.2 0.960 113.0 49.0 -58.1 -55.0 11.7 20.9 -15.4 100 100 A N H X S+ 0 0 64 -4,-2.7 4,-1.9 1,-0.2 5,-0.3 0.937 106.9 56.3 -50.6 -53.9 12.1 22.1 -19.0 101 101 A G H X S+ 0 0 12 -4,-1.1 4,-2.1 -5,-0.5 -1,-0.2 0.905 107.4 48.2 -45.2 -52.2 14.5 24.8 -18.0 102 102 A Y H X S+ 0 0 0 -4,-1.8 4,-1.5 1,-0.2 -1,-0.2 0.908 104.8 60.8 -57.2 -44.5 16.9 22.4 -16.3 103 103 A V H >X S+ 0 0 47 -4,-2.1 4,-1.3 1,-0.2 3,-0.7 0.923 108.8 41.8 -48.5 -52.6 16.8 20.1 -19.3 104 104 A I H 3X S+ 0 0 106 -4,-1.9 4,-1.0 1,-0.2 -1,-0.2 0.875 103.5 67.9 -64.4 -38.3 18.2 22.9 -21.5 105 105 A H H 3< S+ 0 0 59 -4,-2.1 3,-0.2 1,-0.3 -1,-0.2 0.838 109.4 37.4 -50.2 -35.5 20.7 23.8 -18.8 106 106 A L H << S+ 0 0 56 -4,-1.5 -1,-0.3 -3,-0.7 -2,-0.2 0.726 94.9 84.3 -88.7 -25.3 22.4 20.5 -19.4 107 107 A D H < 0 0 133 -4,-1.3 -2,-0.2 1,-0.3 -1,-0.2 0.807 360.0 360.0 -46.0 -32.6 21.8 20.6 -23.2 108 108 A Y < 0 0 223 -4,-1.0 -1,-0.3 -3,-0.2 -2,-0.1 0.527 360.0 360.0 -41.8 360.0 25.0 22.6 -23.2