==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JUN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 15-APR-11 2LC3 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE HECTD1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,C.ARROWSMITH,S.DHE-PAGANO . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6257.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 62.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 43.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 218 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 174.6 3.4 0.5 -2.4 2 2 A K > - 0 0 114 1,-0.0 3,-1.8 0, 0.0 4,-0.1 -0.673 360.0-161.0-153.9 94.8 5.2 -2.7 -3.2 3 3 A D T > S+ 0 0 122 1,-0.3 3,-1.2 -2,-0.2 4,-0.0 0.589 84.1 77.0 -63.9 -12.1 9.1 -2.1 -3.1 4 4 A S T >> S+ 0 0 46 1,-0.2 4,-1.6 2,-0.1 3,-0.9 0.400 71.8 86.2 -74.5 1.9 9.7 -5.3 -5.2 5 5 A D H <> + 0 0 71 -3,-1.8 4,-1.2 1,-0.2 -1,-0.2 0.648 62.4 88.5 -72.1 -16.5 8.5 -3.3 -8.2 6 6 A K H <4 S+ 0 0 155 -3,-1.2 -1,-0.2 1,-0.2 -2,-0.1 0.657 113.8 10.1 -60.1 -17.0 12.2 -2.1 -8.5 7 7 A E H <4 S+ 0 0 41 -3,-0.9 79,-0.3 77,-0.1 80,-0.2 0.485 132.4 54.4-126.8 -28.3 12.7 -5.2 -10.7 8 8 A K H < S+ 0 0 111 -4,-1.6 -2,-0.2 77,-0.1 -3,-0.2 0.058 77.9 132.6-101.1 25.7 9.0 -6.4 -11.2 9 9 A E < - 0 0 67 -4,-1.2 3,-0.2 1,-0.1 2,-0.2 -0.330 55.1-117.2 -72.9 158.1 7.6 -3.0 -12.6 10 10 A N S S+ 0 0 170 1,-0.2 3,-0.1 -2,-0.0 -1,-0.1 -0.608 86.3 59.9 -94.3 156.4 5.4 -2.8 -15.8 11 11 A G + 0 0 58 -2,-0.2 2,-1.7 1,-0.2 -1,-0.2 0.689 54.7 160.9 95.6 24.7 6.4 -1.0 -19.0 12 12 A K - 0 0 66 -3,-0.2 3,-0.5 72,-0.1 -1,-0.2 -0.641 25.2-173.3 -77.8 85.2 9.5 -3.1 -19.7 13 13 A M + 0 0 101 -2,-1.7 3,-0.1 1,-0.2 0, 0.0 -0.302 51.0 43.5 -78.1 162.9 9.6 -2.1 -23.4 14 14 A G + 0 0 10 1,-0.2 2,-1.7 -2,-0.1 -1,-0.2 0.573 59.9 139.2 81.7 10.9 11.9 -3.5 -26.1 15 15 A C + 0 0 95 -3,-0.5 -1,-0.2 23,-0.0 2,-0.1 -0.603 36.3 165.7 -85.1 73.5 11.8 -7.2 -25.2 16 16 A W - 0 0 64 -2,-1.7 2,-0.1 1,-0.1 3,-0.0 -0.323 41.7 -93.6 -84.6 168.0 11.6 -8.2 -28.9 17 17 A S > - 0 0 85 1,-0.1 4,-2.0 -2,-0.1 -1,-0.1 -0.483 34.0-118.4 -73.0 154.9 12.1 -11.6 -30.6 18 18 A I H > S+ 0 0 56 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.922 116.7 47.1 -62.1 -46.2 15.7 -12.4 -31.9 19 19 A E H > S+ 0 0 142 1,-0.2 4,-1.9 2,-0.2 5,-0.4 0.789 107.9 56.6 -69.5 -28.6 14.4 -12.7 -35.5 20 20 A H H > S+ 0 0 58 3,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.941 111.7 44.6 -62.9 -47.0 12.5 -9.4 -35.1 21 21 A V H X S+ 0 0 1 -4,-2.0 4,-1.3 2,-0.2 -2,-0.2 0.991 119.1 38.2 -57.3 -64.5 15.8 -7.7 -34.1 22 22 A E H < S+ 0 0 68 -4,-2.4 -3,-0.2 1,-0.2 -2,-0.2 0.816 121.7 41.0 -64.2 -41.9 18.1 -9.2 -36.8 23 23 A Q H < S+ 0 0 128 -4,-1.9 -1,-0.2 -5,-0.2 -3,-0.2 0.849 122.7 39.0 -77.7 -37.1 15.7 -9.1 -39.8 24 24 A Y H >< S+ 0 0 88 -4,-1.6 3,-2.4 -5,-0.4 6,-0.7 0.437 80.8 128.5 -96.1 -1.9 14.1 -5.7 -39.0 25 25 A L B 3< S+a 30 0A 20 -4,-1.3 41,-0.1 1,-0.3 3,-0.1 -0.425 80.5 20.9 -58.1 111.8 17.5 -4.0 -37.9 26 26 A G T 3 S+ 0 0 50 4,-1.6 -1,-0.3 -2,-0.4 2,-0.1 0.388 102.8 108.9 105.8 2.8 17.6 -0.8 -40.0 27 27 A T S < S- 0 0 52 -3,-2.4 -1,-0.3 3,-1.0 5,-0.1 -0.297 83.6-107.2 -93.5-178.3 13.8 -0.5 -40.8 28 28 A D S S+ 0 0 172 1,-0.1 -1,-0.1 2,-0.1 -3,-0.0 0.662 121.4 55.3 -77.3 -20.7 11.2 1.9 -39.6 29 29 A E S S+ 0 0 138 1,-0.2 -1,-0.1 -5,-0.1 -4,-0.1 0.893 128.2 11.3 -79.5 -46.0 9.8 -1.0 -37.5 30 30 A L B S-a 25 0A 3 -6,-0.7 -4,-1.6 -9,-0.1 -3,-1.0 -0.731 80.1-167.8-135.1 81.2 13.1 -1.8 -35.7 31 31 A P >> - 0 0 37 0, 0.0 4,-1.0 0, 0.0 3,-0.7 -0.450 30.1-121.2 -65.3 146.9 15.7 1.0 -36.2 32 32 A K H 3> S+ 0 0 57 1,-0.2 4,-2.1 2,-0.2 3,-0.5 0.852 110.0 62.1 -56.7 -38.5 19.3 0.2 -35.2 33 33 A N H 3> S+ 0 0 44 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.859 100.4 52.2 -58.1 -41.4 19.3 3.2 -32.7 34 34 A D H <> S+ 0 0 84 -3,-0.7 4,-2.2 2,-0.2 -1,-0.2 0.776 108.0 51.1 -71.0 -29.8 16.4 1.7 -30.6 35 35 A L H X S+ 0 0 0 -4,-1.0 4,-2.1 -3,-0.5 -2,-0.2 0.941 112.6 46.4 -66.5 -49.9 18.3 -1.6 -30.2 36 36 A I H X S+ 0 0 0 -4,-2.1 4,-2.1 1,-0.2 -2,-0.2 0.866 112.4 52.3 -57.2 -39.8 21.4 0.3 -29.1 37 37 A T H X S+ 0 0 38 -4,-2.2 4,-1.6 2,-0.2 -2,-0.2 0.940 107.6 49.3 -64.8 -50.9 19.1 2.4 -26.7 38 38 A Y H X S+ 0 0 1 -4,-2.2 4,-2.8 1,-0.2 5,-0.4 0.905 112.2 49.9 -54.6 -46.7 17.5 -0.7 -25.1 39 39 A L H X S+ 0 0 0 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.911 112.7 44.4 -61.6 -46.2 21.0 -2.2 -24.5 40 40 A Q H < S+ 0 0 73 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.669 116.6 48.7 -77.2 -17.7 22.5 1.0 -22.9 41 41 A K H < S+ 0 0 141 -4,-1.6 -2,-0.2 -3,-0.2 -1,-0.2 0.931 124.4 25.9 -77.3 -55.3 19.3 1.4 -20.8 42 42 A N H < S+ 0 0 35 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.2 0.915 110.9 71.7 -80.5 -46.4 19.0 -2.1 -19.4 43 43 A A S < S- 0 0 12 -4,-2.1 2,-0.1 -5,-0.4 33,-0.0 -0.183 85.1 -99.7 -76.4 162.5 22.7 -3.5 -19.5 44 44 A D >> - 0 0 115 1,-0.1 3,-1.2 4,-0.0 4,-1.1 -0.401 37.6-106.0 -73.4 158.1 25.7 -2.5 -17.3 45 45 A A H 3> S+ 0 0 74 1,-0.3 4,-1.9 2,-0.2 5,-0.2 0.789 119.1 63.7 -58.4 -31.1 28.3 -0.0 -18.6 46 46 A A H 3> S+ 0 0 73 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.863 98.3 54.6 -57.6 -41.6 30.7 -3.0 -19.1 47 47 A F H <> S+ 0 0 36 -3,-1.2 4,-1.6 2,-0.2 6,-0.2 0.909 110.1 44.4 -64.4 -45.4 28.4 -4.6 -21.7 48 48 A L H <>S+ 0 0 9 -4,-1.1 5,-2.1 1,-0.2 6,-1.0 0.827 111.7 53.4 -71.2 -33.2 28.3 -1.4 -23.9 49 49 A R H <5S+ 0 0 169 -4,-1.9 -1,-0.2 4,-0.2 -2,-0.2 0.773 109.2 51.4 -68.8 -26.3 32.1 -1.0 -23.5 50 50 A H H <5S+ 0 0 130 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.833 118.1 35.3 -75.9 -38.2 32.3 -4.6 -24.8 51 51 A W T <5S- 0 0 31 -4,-1.6 -2,-0.2 -5,-0.1 -1,-0.2 0.310 111.9-116.2-100.1 6.4 30.1 -4.0 -27.9 52 52 A K T 5S+ 0 0 121 -4,-0.5 3,-0.5 -5,-0.1 -3,-0.2 0.702 82.4 124.0 63.9 24.4 31.5 -0.4 -28.4 53 53 A L < + 0 0 1 -5,-2.1 -4,-0.2 -6,-0.2 -5,-0.1 0.187 44.2 94.4 -92.4 11.5 27.9 1.0 -27.7 54 54 A T S S+ 0 0 84 -6,-1.0 -1,-0.2 -7,-0.1 -5,-0.1 0.532 76.9 65.6 -80.0 -9.0 29.5 3.2 -24.9 55 55 A G S S- 0 0 53 -3,-0.5 2,-0.4 -7,-0.2 -2,-0.1 0.339 107.0 -43.7 -90.0-143.1 29.9 6.2 -27.2 56 56 A T > - 0 0 91 1,-0.1 4,-2.0 4,-0.0 3,-0.5 -0.844 50.3-127.7 -93.9 130.7 27.4 8.5 -29.0 57 57 A N H > S+ 0 0 26 -2,-0.4 4,-2.2 1,-0.2 5,-0.1 0.676 107.0 60.9 -53.5 -25.1 24.5 6.6 -30.7 58 58 A K H > S+ 0 0 152 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.988 111.1 36.3 -63.9 -57.4 25.2 8.4 -34.0 59 59 A S H > S+ 0 0 59 -3,-0.5 4,-2.2 1,-0.2 5,-0.3 0.781 115.5 59.1 -67.9 -26.6 28.8 7.0 -34.4 60 60 A I H X S+ 0 0 5 -4,-2.0 4,-2.5 2,-0.2 -1,-0.2 0.938 108.3 41.5 -68.2 -48.5 27.5 3.7 -32.9 61 61 A R H < S+ 0 0 132 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.707 118.5 49.7 -73.1 -19.2 24.9 3.1 -35.6 62 62 A K H < S+ 0 0 155 -4,-1.3 -2,-0.2 -5,-0.1 -1,-0.2 0.832 124.7 25.3 -82.4 -37.8 27.5 4.3 -38.2 63 63 A N H < S+ 0 0 101 -4,-2.2 2,-0.7 1,-0.1 -3,-0.2 0.707 114.6 66.2-101.6 -29.9 30.5 2.1 -37.0 64 64 A R S < S- 0 0 70 -4,-2.5 -1,-0.1 -5,-0.3 -13,-0.0 -0.894 74.4-159.3-100.4 109.9 28.6 -0.8 -35.4 65 65 A N >> - 0 0 95 -2,-0.7 4,-1.2 -3,-0.1 3,-0.8 -0.136 39.1 -84.7 -78.3 179.9 26.6 -2.8 -38.0 66 66 A C H 3> S+ 0 0 47 1,-0.2 4,-2.6 2,-0.2 3,-0.3 0.877 124.1 65.9 -54.8 -41.9 23.6 -5.1 -37.4 67 67 A S H 3> S+ 0 0 79 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.841 102.4 47.5 -47.6 -44.7 26.0 -8.1 -36.6 68 68 A Q H <> S+ 0 0 52 -3,-0.8 4,-1.9 1,-0.2 -1,-0.2 0.904 114.6 45.5 -64.3 -45.5 27.2 -6.2 -33.4 69 69 A L H X S+ 0 0 0 -4,-1.2 4,-2.3 -3,-0.3 -2,-0.2 0.818 113.9 48.2 -71.0 -36.1 23.6 -5.4 -32.3 70 70 A I H X S+ 0 0 25 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.961 114.8 43.9 -70.6 -53.3 22.2 -9.0 -33.0 71 71 A A H X S+ 0 0 25 -4,-2.1 4,-2.4 -5,-0.2 -2,-0.2 0.874 115.6 50.7 -60.2 -41.3 25.0 -10.8 -31.1 72 72 A A H X S+ 0 0 0 -4,-1.9 4,-1.7 -5,-0.2 -2,-0.2 0.959 112.2 44.8 -57.1 -54.8 24.8 -8.2 -28.3 73 73 A Y H X S+ 0 0 1 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.875 115.5 48.4 -62.5 -41.0 20.9 -8.6 -27.9 74 74 A K H X S+ 0 0 89 -4,-2.6 4,-2.8 1,-0.2 5,-0.3 0.984 113.0 45.5 -61.7 -58.0 21.1 -12.4 -28.1 75 75 A D H X S+ 0 0 91 -4,-2.4 4,-1.0 1,-0.2 -1,-0.2 0.717 111.7 56.2 -60.3 -25.1 24.0 -12.7 -25.5 76 76 A F H X>S+ 0 0 3 -4,-1.7 5,-1.2 2,-0.2 4,-1.2 0.959 112.8 37.6 -69.0 -55.4 22.1 -10.2 -23.3 77 77 A C H <5S+ 0 0 50 -4,-2.1 3,-0.2 1,-0.2 -2,-0.2 0.880 119.2 50.1 -64.5 -38.0 18.9 -12.3 -23.1 78 78 A E H <5S+ 0 0 161 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.721 102.9 61.3 -73.7 -26.4 20.9 -15.5 -22.9 79 79 A H H <5S- 0 0 133 -4,-1.0 -1,-0.2 -5,-0.3 -2,-0.2 0.829 110.6-125.9 -65.3 -35.2 23.0 -14.0 -20.1 80 80 A G T <5 - 0 0 41 -4,-1.2 -3,-0.2 -3,-0.2 -2,-0.1 0.896 33.9-137.4 88.0 43.5 19.8 -13.8 -18.1 81 81 A T >< - 0 0 6 -5,-1.2 4,-0.5 1,-0.1 3,-0.1 0.211 12.6-136.0 -43.1 149.9 20.1 -10.1 -17.4 82 82 A K T 4 S+ 0 0 168 1,-0.2 -1,-0.1 2,-0.1 4,-0.1 -0.030 71.1 116.3 -98.9 29.7 19.4 -8.4 -14.0 83 83 A S T 4 S- 0 0 20 2,-0.1 -1,-0.2 1,-0.1 3,-0.1 0.048 103.7 -86.4 -85.5 24.3 17.5 -5.5 -15.7 84 84 A G T 4 S+ 0 0 10 1,-0.2 2,-0.7 -3,-0.1 -2,-0.1 0.833 87.1 139.8 71.8 32.5 14.3 -6.6 -13.9 85 85 A L S < S- 0 0 49 -4,-0.5 -1,-0.2 1,-0.1 -2,-0.1 -0.801 96.3 -40.5-108.3 81.7 13.3 -9.2 -16.6 86 86 A N S S+ 0 0 171 -2,-0.7 2,-0.3 -79,-0.3 -1,-0.1 0.876 124.6 105.2 61.1 43.1 12.1 -12.1 -14.4 87 87 A Q 0 0 72 -80,-0.2 -1,-0.2 -5,-0.0 -6,-0.0 -0.969 360.0 360.0-148.4 151.3 15.0 -11.3 -12.1 88 88 A G 0 0 90 -2,-0.3 -84,-0.0 -3,-0.1 -3,-0.0 -0.968 360.0 360.0 169.4 360.0 15.5 -9.6 -8.6