==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE, SIGNALING PROTEIN 07-MAY-11 2LCS . COMPND 2 MOLECULE: NAP1-BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.GORELIK,A.R.DAVIDSON . 83 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5999.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 51.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 28.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -4 A M 0 0 221 0, 0.0 2,-2.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 68.8 2.1 -0.0 -1.2 2 -3 A A + 0 0 85 32,-0.0 2,-0.4 2,-0.0 0, 0.0 -0.444 360.0 131.2 -77.5 69.9 0.7 -3.0 -3.1 3 -2 A I + 0 0 79 -2,-2.4 31,-0.2 1,-0.1 30,-0.1 -0.983 35.1 177.4-128.3 136.6 3.2 -2.9 -5.9 4 -1 A V - 0 0 103 29,-2.1 29,-0.1 -2,-0.4 30,-0.1 0.698 31.0-143.7-104.3 -29.1 5.3 -5.7 -7.4 5 1 A N + 0 0 118 28,-0.7 2,-0.5 27,-0.4 28,-0.2 0.962 36.9 164.2 62.2 54.1 7.1 -3.7 -10.1 6 2 A Q E -A 32 0A 54 26,-1.8 26,-2.4 57,-0.0 -1,-0.2 -0.914 29.2-138.5-109.1 124.3 7.1 -6.6 -12.6 7 3 A R E -A 31 0A 104 -2,-0.5 55,-1.5 24,-0.3 2,-0.3 -0.295 22.6-175.2 -74.7 162.1 7.7 -5.9 -16.3 8 4 A A E -AB 30 61A 0 22,-2.7 22,-2.5 53,-0.3 2,-0.3 -0.991 20.0-123.5-157.1 155.0 5.8 -7.6 -19.1 9 5 A V E -AB 29 60A 40 51,-2.3 51,-2.1 -2,-0.3 2,-0.9 -0.756 26.4-117.0-104.0 150.3 5.6 -7.9 -22.9 10 6 A A E - B 0 59A 2 18,-2.2 17,-3.0 -2,-0.3 18,-0.3 -0.753 27.0-179.3 -89.1 105.4 2.7 -7.1 -25.2 11 7 A L S S+ 0 0 60 47,-2.0 2,-0.3 -2,-0.9 48,-0.2 0.864 72.7 9.1 -70.2 -36.8 1.7 -10.3 -27.0 12 8 A Y S S- 0 0 56 46,-1.4 2,-0.3 13,-0.1 -1,-0.2 -0.973 84.1 -99.4-143.8 156.7 -1.1 -8.5 -28.9 13 9 A D - 0 0 112 -2,-0.3 2,-0.3 12,-0.2 12,-0.3 -0.581 41.0-177.4 -79.0 135.5 -2.3 -4.9 -29.5 14 10 A F B -F 24 0B 19 10,-1.9 10,-2.9 -2,-0.3 44,-0.0 -0.984 15.8-146.4-136.0 146.0 -5.3 -3.7 -27.4 15 11 A E - 0 0 147 -2,-0.3 8,-0.1 8,-0.2 7,-0.1 -0.925 22.7-118.4-116.0 136.1 -7.3 -0.5 -27.2 16 12 A P - 0 0 26 0, 0.0 7,-0.1 0, 0.0 38,-0.0 -0.373 17.0-168.3 -69.8 146.1 -8.9 1.0 -24.1 17 13 A E S S+ 0 0 126 -2,-0.1 2,-0.2 0, 0.0 -2,-0.0 0.589 70.0 52.8-107.9 -18.7 -12.6 1.4 -23.9 18 14 A N S > S- 0 0 64 4,-0.1 3,-0.7 1,-0.0 0, 0.0 -0.575 88.8-109.8-111.4 176.1 -12.7 3.6 -20.8 19 15 A D T 3 S+ 0 0 170 1,-0.2 -1,-0.0 -2,-0.2 3,-0.0 0.116 116.0 51.7 -92.2 20.9 -11.1 6.9 -19.8 20 16 A N T 3 S+ 0 0 37 2,-0.1 33,-0.6 52,-0.0 2,-0.3 0.184 88.8 97.9-138.2 12.3 -8.9 5.0 -17.2 21 17 A E B < -c 53 0A 18 -3,-0.7 2,-0.3 31,-0.2 33,-0.2 -0.721 63.9-130.0-105.5 156.2 -7.5 2.2 -19.4 22 18 A L - 0 0 6 31,-3.0 2,-0.2 -2,-0.3 30,-0.1 -0.763 19.8-118.9-105.5 151.4 -4.1 2.0 -21.1 23 19 A R - 0 0 163 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.2 -0.571 26.6-163.1 -87.8 150.9 -3.3 1.2 -24.7 24 20 A L B -F 14 0B 11 -10,-2.9 -10,-1.9 -2,-0.2 2,-0.4 -0.972 6.3-167.5-135.2 149.6 -1.2 -1.8 -25.7 25 21 A A > - 0 0 32 -2,-0.3 3,-2.9 -12,-0.3 -15,-0.2 -0.999 37.4 -95.5-140.2 136.8 0.6 -2.9 -28.9 26 22 A E T 3 S+ 0 0 141 -2,-0.4 -15,-0.2 1,-0.3 3,-0.1 -0.246 115.7 18.8 -50.5 120.2 2.2 -6.1 -30.0 27 23 A G T 3 S+ 0 0 55 -17,-3.0 -1,-0.3 1,-0.4 2,-0.2 0.418 96.5 131.4 96.2 -0.6 5.9 -5.9 -29.1 28 24 A D < - 0 0 78 -3,-2.9 -18,-2.2 -18,-0.3 2,-0.4 -0.597 52.2-130.9 -87.3 147.5 5.4 -3.1 -26.7 29 25 A I E +A 9 0A 68 -2,-0.2 2,-0.3 -20,-0.2 17,-0.2 -0.787 28.3 174.0-100.6 141.0 6.9 -3.1 -23.2 30 26 A V E -A 8 0A 4 -22,-2.5 -22,-2.7 -2,-0.4 2,-0.6 -0.964 27.6-131.7-142.8 158.3 4.9 -2.4 -20.0 31 27 A F E -AD 7 44A 73 13,-2.2 13,-1.7 -2,-0.3 2,-1.0 -0.921 17.6-144.2-117.2 108.1 5.4 -2.4 -16.2 32 28 A I E -AD 6 43A 0 -26,-2.4 -26,-1.8 -2,-0.6 -27,-0.4 -0.573 15.3-175.0 -72.8 102.7 2.7 -4.2 -14.2 33 29 A S E - 0 0 21 9,-1.9 -29,-2.1 -2,-1.0 -28,-0.7 0.893 67.2 -27.6 -64.8 -40.9 2.5 -2.1 -11.0 34 30 A Y E - D 0 42A 62 8,-1.4 8,-1.9 -31,-0.2 -1,-0.3 -0.927 65.0-102.9-173.9 149.3 -0.0 -4.5 -9.5 35 31 A K E - D 0 41A 162 -2,-0.3 2,-0.3 6,-0.2 6,-0.2 -0.538 36.0-167.8 -80.8 145.1 -2.8 -7.0 -10.5 36 32 A H E > - D 0 40A 77 4,-1.4 4,-0.9 -2,-0.2 3,-0.3 -0.933 22.7-101.3-132.8 155.9 -6.4 -6.0 -10.1 37 33 A G T >4 S+ 0 0 45 -2,-0.3 3,-1.6 1,-0.2 -1,-0.2 0.144 95.7 59.9 -61.7-174.2 -9.7 -7.9 -10.2 38 34 A Q T 34 S- 0 0 129 1,-0.3 39,-0.5 36,-0.1 -1,-0.2 0.644 129.2 -75.9 64.9 13.3 -12.1 -8.0 -13.2 39 35 A G T 34 S+ 0 0 43 -3,-0.3 17,-0.8 1,-0.2 2,-0.4 0.812 102.3 127.3 68.2 30.0 -9.2 -9.5 -15.1 40 36 A W E << -DE 36 55A 0 -3,-1.6 -4,-1.4 -4,-0.9 2,-0.4 -0.964 42.4-161.3-123.6 137.5 -7.4 -6.1 -15.4 41 37 A L E -DE 35 54A 5 13,-2.6 13,-2.9 -2,-0.4 2,-0.8 -0.961 20.8-126.7-120.6 133.2 -3.9 -5.3 -14.4 42 38 A V E +DE 34 53A 2 -8,-1.9 -9,-1.9 -2,-0.4 -8,-1.4 -0.664 44.7 159.0 -79.9 109.1 -2.5 -1.8 -13.7 43 39 A A E -DE 32 52A 0 9,-1.8 9,-2.3 -2,-0.8 2,-0.3 -0.884 28.6-138.9-129.5 161.0 0.6 -1.3 -15.9 44 40 A E E -DE 31 51A 39 -13,-1.7 -13,-2.2 -2,-0.3 7,-0.3 -0.817 22.8-108.0-119.0 159.3 2.5 1.7 -17.3 45 41 A N > - 0 0 40 5,-2.6 3,-0.6 -2,-0.3 -14,-0.1 0.016 41.7 -93.4 -71.9-175.3 4.1 2.4 -20.6 46 42 A E T 3 S+ 0 0 149 -17,-0.2 -16,-0.1 1,-0.2 -1,-0.1 0.875 122.0 65.5 -69.6 -38.6 7.9 2.4 -21.3 47 43 A S T 3 S- 0 0 96 1,-0.1 -1,-0.2 3,-0.0 -2,-0.0 0.744 97.1-141.8 -56.0 -22.6 8.1 6.2 -20.7 48 44 A G S < S+ 0 0 46 -3,-0.6 -1,-0.1 2,-0.2 -2,-0.1 0.594 83.9 88.8 69.8 9.0 7.2 5.4 -17.2 49 45 A S S S+ 0 0 108 1,-0.1 2,-0.5 2,-0.0 -1,-0.1 0.595 74.7 66.5-108.9 -19.9 5.0 8.5 -17.2 50 46 A K + 0 0 92 2,-0.0 -5,-2.6 -28,-0.0 2,-0.3 -0.919 62.2 174.9-109.9 123.6 1.8 7.0 -18.5 51 47 A T E + E 0 44A 62 -2,-0.5 2,-0.3 -7,-0.3 -7,-0.2 -0.919 14.2 119.7-126.8 152.6 -0.1 4.5 -16.3 52 48 A G E - E 0 43A 0 -9,-2.3 -9,-1.8 -2,-0.3 2,-0.4 -0.935 57.3 -47.7-177.2-161.2 -3.4 2.7 -16.7 53 49 A L E +cE 21 42A 0 -33,-0.6 -31,-3.0 -2,-0.3 -11,-0.2 -0.802 48.1 179.8-100.7 138.7 -5.2 -0.6 -17.0 54 50 A V E - E 0 41A 0 -13,-2.9 -13,-2.6 -2,-0.4 2,-0.1 -0.964 31.9 -97.6-137.4 153.6 -4.1 -3.4 -19.3 55 51 A P E - E 0 40A 0 0, 0.0 3,-0.3 0, 0.0 4,-0.2 -0.398 18.2-156.5 -69.8 142.9 -5.2 -6.9 -20.3 56 52 A E S > S+ 0 0 88 -17,-0.8 3,-0.5 1,-0.2 -16,-0.1 0.741 93.6 56.7 -89.9 -27.3 -3.5 -9.9 -18.6 57 53 A E T 3 S+ 0 0 105 -18,-0.3 -1,-0.2 1,-0.2 3,-0.0 0.261 106.9 52.5 -87.1 12.1 -4.4 -12.3 -21.4 58 54 A F T 3 S+ 0 0 19 -3,-0.3 -47,-2.0 22,-0.1 -46,-1.4 0.436 105.6 57.3-121.9 -8.8 -2.7 -10.1 -23.9 59 55 A V E < -B 10 0A 8 -3,-0.5 2,-0.4 -49,-0.2 -49,-0.2 -0.735 66.6-141.5-120.4 169.8 0.7 -9.7 -22.1 60 56 A S E -B 9 0A 53 -51,-2.1 -51,-2.3 -2,-0.2 -3,-0.1 -0.945 23.5-120.8-138.7 115.3 3.4 -12.0 -20.9 61 57 A Y E -B 8 0A 98 -2,-0.4 2,-0.3 -53,-0.2 -53,-0.3 -0.269 31.2-141.9 -54.2 128.8 5.3 -11.6 -17.6 62 58 A I - 0 0 46 -55,-1.5 -55,-0.2 5,-0.1 -1,-0.1 -0.698 16.3-165.6 -97.1 148.6 9.1 -11.3 -18.4 63 59 A Q - 0 0 82 -2,-0.3 -57,-0.0 3,-0.2 -55,-0.0 -0.894 28.0-125.7-131.2 160.9 11.8 -12.7 -16.2 64 60 A P S S- 0 0 107 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.931 99.6 -25.3 -69.8 -48.1 15.6 -12.3 -15.9 65 61 A E S S+ 0 0 183 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.091 116.0 95.6-156.6 25.2 16.5 -16.0 -16.3 66 62 A L 0 0 115 0, 0.0 -3,-0.2 0, 0.0 0, 0.0 -0.677 360.0 360.0-116.9 172.3 13.4 -17.9 -15.2 67 63 A E 0 0 231 -2,-0.2 -5,-0.1 -5,-0.1 0, 0.0 -0.943 360.0 360.0-147.7 360.0 10.3 -19.4 -16.9 68 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 69 -9 B G 0 0 102 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.1 -8.0 3.9 -6.4 70 -8 B K + 0 0 178 -18,-0.0 2,-0.2 -50,-0.0 -18,-0.0 0.983 360.0 54.7 -74.3 -62.8 -7.6 5.9 -9.6 71 -7 B F + 0 0 45 -19,-0.1 -50,-0.1 1,-0.0 -29,-0.1 -0.485 59.7 174.1 -75.4 142.7 -8.3 3.3 -12.2 72 -6 B I - 0 0 116 -2,-0.2 2,-0.2 -19,-0.0 -51,-0.1 -0.597 12.8-161.3-153.2 84.1 -11.5 1.3 -12.0 73 -5 B P - 0 0 11 0, 0.0 2,-0.1 0, 0.0 -33,-0.1 -0.455 7.5-175.8 -69.7 134.5 -12.3 -1.1 -14.9 74 -4 B S + 0 0 99 -2,-0.2 -36,-0.1 2,-0.1 -2,-0.0 -0.518 52.4 62.3-131.5 65.4 -16.0 -2.1 -15.2 75 -3 B R S S- 0 0 74 -37,-0.1 2,-0.2 -2,-0.1 0, 0.0 -0.928 86.0 -81.0-178.7 155.0 -16.1 -4.7 -18.0 76 -2 B P - 0 0 111 0, 0.0 -37,-0.1 0, 0.0 -2,-0.1 -0.482 50.3-116.4 -69.8 129.3 -14.9 -8.2 -19.1 77 -1 B A - 0 0 26 -39,-0.5 -37,-0.1 -2,-0.2 -38,-0.0 -0.218 33.8-102.6 -63.5 154.5 -11.4 -8.2 -20.5 78 0 B P - 0 0 44 0, 0.0 -21,-0.2 0, 0.0 -1,-0.1 -0.044 31.9-119.5 -69.8 176.8 -10.9 -9.2 -24.2 79 1 B K - 0 0 162 -21,-0.0 -21,-0.1 -24,-0.0 0, 0.0 -0.936 21.4-111.2-125.1 147.0 -9.6 -12.6 -25.4 80 2 B P - 0 0 34 0, 0.0 -22,-0.1 0, 0.0 -1,-0.0 -0.196 38.2 -99.6 -69.7 163.3 -6.5 -13.5 -27.5 81 3 B P - 0 0 75 0, 0.0 -69,-0.0 0, 0.0 0, 0.0 0.126 19.1-126.8 -69.8-170.0 -6.6 -14.8 -31.1 82 4 B S S S+ 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.654 96.1 66.1-113.3 -29.8 -6.4 -18.5 -32.2 83 5 B S 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.988 360.0 360.0 -56.9 -67.3 -3.6 -18.2 -34.8 84 6 B A 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.345 360.0 360.0 -63.0 360.0 -0.8 -17.3 -32.4