==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 12-MAY-11 2LCY . COMPND 2 MOLECULE: VIRION SPIKE GLYCOPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ZAIRE EBOLAVIRUS; . AUTHOR S.M.GREGORY,E.HARADA,B.LIANG,L.K.TAMM . 54 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3971.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 24.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 507 A A 0 0 97 0, 0.0 48,-0.1 0, 0.0 47,-0.0 0.000 360.0 360.0 360.0 59.8 -11.4 -10.2 -0.4 2 508 A Q - 0 0 78 47,-0.3 2,-0.8 46,-0.2 3,-0.4 -0.738 360.0-142.9-176.6 122.7 -10.1 -8.9 2.9 3 509 A P + 0 0 121 0, 0.0 47,-0.1 0, 0.0 46,-0.1 -0.803 67.8 89.3 -98.1 101.7 -11.7 -7.6 6.1 4 510 A K - 0 0 147 -2,-0.8 46,-0.1 45,-0.5 45,-0.0 0.347 69.8-138.7-152.3 -46.7 -9.7 -4.8 7.7 5 511 A a + 0 0 66 -3,-0.4 45,-0.0 1,-0.0 0, 0.0 0.863 66.9 115.5 75.6 42.3 -10.7 -1.4 6.2 6 512 A N + 0 0 79 4,-0.0 4,-0.0 2,-0.0 -1,-0.0 -0.194 42.9 103.3-130.4 40.4 -7.3 0.0 5.9 7 513 A P S > S- 0 0 0 0, 0.0 4,-1.7 0, 0.0 3,-0.4 0.776 96.0 -7.3 -87.0-105.4 -7.0 0.4 2.1 8 514 A N T 4 S+ 0 0 41 1,-0.2 4,-0.4 2,-0.2 2,-0.1 0.473 119.0 82.7 -74.5 -1.5 -7.4 3.8 0.4 9 515 A L T 4 S+ 0 0 79 1,-0.1 -1,-0.2 2,-0.1 36,-0.1 -0.169 115.3 5.4 -96.4 41.1 -8.4 5.3 3.8 10 516 A H T 4 S+ 0 0 101 -3,-0.4 4,-0.2 35,-0.1 5,-0.2 0.085 99.5 99.4 176.2 -35.9 -4.8 5.7 4.9 11 517 A Y >X> + 0 0 40 -4,-1.7 2,-2.1 1,-0.2 4,-1.7 0.813 65.9 86.9 -38.2 -41.6 -2.6 4.7 1.9 12 518 A W T 345S+ 0 0 151 -4,-0.4 -1,-0.2 1,-0.2 33,-0.0 -0.422 81.1 57.5 -66.1 81.5 -2.3 8.5 1.2 13 519 A T T 345S+ 0 0 64 -2,-2.1 -1,-0.2 0, 0.0 -2,-0.1 0.120 122.1 5.7-169.8 -55.1 0.7 9.0 3.4 14 520 A T T <45S+ 0 0 43 -3,-0.9 6,-0.2 -4,-0.2 4,-0.2 0.357 127.8 57.4-125.1 -3.8 3.7 6.8 2.5 15 521 A Q T <5S+ 0 0 11 -4,-1.7 -3,-0.2 3,-0.3 6,-0.1 0.809 109.9 41.5 -95.4 -38.5 2.2 5.3 -0.6 16 522 A D S > S- 0 0 66 1,-0.1 2,-1.9 4,-0.0 3,-0.6 -0.776 70.8-152.4 -90.6 113.2 11.4 -2.4 -7.1 27 533 A P T 34 + 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 -0.370 64.3 107.7 -82.0 60.2 10.9 -6.0 -5.8 28 534 A Y T 34 S- 0 0 190 -2,-1.9 -4,-0.1 -5,-0.2 12,-0.1 0.839 97.8 -6.7-100.7 -50.4 14.0 -6.0 -3.7 29 535 A F T X4 S+ 0 0 57 -3,-0.6 3,-1.9 10,-0.1 11,-0.1 0.698 77.1 156.8-116.2 -40.3 12.8 -5.8 -0.1 30 536 A G G >< S+ 0 0 10 -4,-0.5 3,-2.2 1,-0.3 4,-0.4 -0.258 81.3 27.5 49.8-104.5 9.0 -5.2 -0.4 31 537 A P G 3 S+ 0 0 97 0, 0.0 -1,-0.3 0, 0.0 3,-0.2 0.582 113.8 71.4 -61.7 -8.2 7.7 -6.5 3.0 32 538 A A G < S+ 0 0 72 -3,-1.9 -2,-0.2 1,-0.2 -3,-0.0 0.674 97.4 47.3 -81.6 -17.6 11.2 -5.5 4.4 33 539 A A S X> S+ 0 0 1 -3,-2.2 3,-2.8 2,-0.1 2,-1.8 0.427 76.9 128.1 -99.1 -3.6 10.3 -1.8 4.1 34 540 A E T 34 S+ 0 0 134 -4,-0.4 4,-0.1 1,-0.3 5,-0.0 -0.328 84.7 14.2 -57.6 84.2 6.9 -2.4 5.7 35 541 A G T 34 S+ 0 0 64 -2,-1.8 -1,-0.3 2,-0.1 -2,-0.1 0.209 115.3 71.0 133.1 -14.1 7.3 0.4 8.3 36 542 A I T <4 S- 0 0 101 -3,-2.8 -2,-0.2 0, 0.0 2,-0.1 0.714 115.2 -67.0-101.7 -27.1 10.2 2.4 7.1 37 543 A Y S < S+ 0 0 119 -4,-1.5 -19,-0.2 -14,-0.0 -18,-0.1 -0.382 112.1 19.6 179.6 -95.9 8.6 4.1 4.1 38 544 A I S S+ 0 0 12 -20,-0.2 3,-0.4 -21,-0.1 4,-0.2 0.954 78.1 179.8 -68.3 -53.9 7.5 2.5 0.8 39 545 A E - 0 0 49 1,-0.2 -9,-0.3 -16,-0.1 2,-0.1 -0.276 48.8 -61.0 79.7-168.1 7.1 -1.1 2.0 40 546 A G S S+ 0 0 17 -11,-0.1 -1,-0.2 1,-0.1 -16,-0.1 -0.370 93.2 114.4-111.6 52.1 6.0 -4.0 -0.2 41 547 A L + 0 0 17 -3,-0.4 -1,-0.1 -11,-0.2 2,-0.1 0.966 25.4 162.9 -82.2 -71.6 2.5 -2.8 -1.1 42 548 A M + 0 0 108 -4,-0.2 -1,-0.1 1,-0.2 -18,-0.0 0.136 66.9 78.5 71.6 -23.0 2.5 -2.2 -4.8 43 549 A H S S- 0 0 103 -2,-0.1 -1,-0.2 1,-0.1 2,-0.1 0.751 81.0-154.5 -84.8 -26.3 -1.3 -2.2 -4.7 44 550 A N - 0 0 52 -33,-0.0 -29,-0.1 1,-0.0 -1,-0.1 0.095 41.6-104.2 73.9 -25.4 -1.4 1.4 -3.3 45 551 A Q + 0 0 46 -2,-0.1 -35,-0.1 1,-0.1 -33,-0.0 0.685 47.3 176.1 74.4 121.9 -4.8 0.5 -1.8 46 552 A D S S- 0 0 93 -37,-0.0 -1,-0.1 -35,-0.0 -2,-0.0 -0.296 72.2 -54.3-154.0 58.5 -8.1 1.7 -3.3 47 553 A G S S+ 0 0 3 6,-0.0 7,-0.6 1,-0.0 -2,-0.0 0.942 95.6 125.5 69.0 48.2 -11.0 0.2 -1.4 48 554 A L S S+ 0 0 81 6,-0.1 -46,-0.2 5,-0.1 -1,-0.0 0.599 82.0 24.9-108.8 -20.1 -10.0 -3.4 -1.8 49 555 A I S S+ 0 0 17 -48,-0.1 -45,-0.5 2,-0.1 -47,-0.3 0.758 122.1 49.7-109.8 -45.9 -10.1 -4.3 1.9 50 556 A a S S+ 0 0 50 1,-0.3 2,-0.3 -47,-0.1 -2,-0.0 0.689 131.8 12.9 -68.2 -18.5 -12.5 -1.8 3.4 51 557 A G > - 0 0 7 -49,-0.1 3,-1.2 1,-0.1 -1,-0.3 -0.798 55.3-162.3-164.6 115.9 -14.9 -2.8 0.7 52 558 A L T 3 S+ 0 0 119 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.1 0.613 101.2 44.0 -72.1 -14.2 -14.8 -5.7 -1.7 53 559 A R T 3 0 0 223 1,-0.1 -1,-0.3 0, 0.0 -5,-0.1 0.081 360.0 360.0-118.2 21.3 -17.3 -3.8 -4.0 54 560 A Q < 0 0 174 -3,-1.2 -1,-0.1 -7,-0.6 -2,-0.1 0.641 360.0 360.0 -75.2 360.0 -15.7 -0.3 -3.8