==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 12-MAY-11 2LCZ . COMPND 2 MOLECULE: VIRION SPIKE GLYCOPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ZAIRE EBOLAVIRUS; . AUTHOR S.M.GREGORY,E.HARADA,B.LIANG,L.K.TAMM . 54 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3832.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 507 A A 0 0 151 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 30.5 -14.6 -11.7 -6.0 2 508 A Q - 0 0 92 52,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.189 360.0-175.7-171.1 64.2 -15.0 -8.9 -3.5 3 509 A P - 0 0 66 0, 0.0 2,-0.5 0, 0.0 49,-0.2 0.026 23.4-121.3 -59.8 173.4 -12.0 -8.6 -1.0 4 510 A K S S- 0 0 126 1,-0.3 46,-0.2 49,-0.2 4,-0.1 -0.974 75.3 -10.6-127.0 118.8 -12.0 -6.2 2.0 5 511 A a - 0 0 36 44,-2.8 -1,-0.3 49,-0.5 45,-0.2 0.911 59.0-175.9 60.3 101.3 -9.3 -3.6 2.4 6 512 A N S S+ 0 0 82 -3,-0.1 3,-0.1 1,-0.1 -2,-0.1 0.896 84.3 19.9 -91.0 -51.4 -6.5 -4.2 -0.1 7 513 A P S S+ 0 0 3 0, 0.0 38,-0.1 0, 0.0 -1,-0.1 0.054 107.2 84.9-106.5 21.0 -4.0 -1.4 0.9 8 514 A N + 0 0 28 4,-0.1 -2,-0.0 1,-0.1 41,-0.0 -0.389 64.0 92.5-118.8 51.2 -5.4 -0.9 4.4 9 515 A L S S- 0 0 72 -3,-0.1 -1,-0.1 0, 0.0 -3,-0.0 0.812 102.0 -72.6-105.6 -67.4 -3.5 -3.7 6.2 10 516 A H S >>S+ 0 0 99 3,-0.0 4,-2.4 4,-0.0 5,-0.6 0.215 117.8 67.0-161.5 -57.0 -0.3 -2.4 7.6 11 517 A Y T 45S+ 0 0 98 1,-0.2 6,-0.5 2,-0.2 7,-0.1 0.565 123.2 23.9 -55.9 -9.6 2.5 -1.6 5.1 12 518 A W T 45S+ 0 0 33 4,-0.1 -1,-0.2 5,-0.1 5,-0.1 0.642 117.8 56.8-123.2 -44.3 0.2 1.2 3.9 13 519 A T T 45S+ 0 0 78 1,-0.1 -2,-0.2 3,-0.1 -5,-0.1 0.779 116.6 39.7 -63.1 -28.8 -2.1 2.1 6.8 14 520 A T T <5S+ 0 0 121 -4,-2.4 -3,-0.2 0, 0.0 -1,-0.1 0.952 127.7 8.5 -84.6 -65.7 1.0 2.8 8.9 15 521 A Q S S+ 0 0 18 1,-0.1 2,-1.7 7,-0.0 3,-1.4 -0.264 99.2 83.8 78.0 -51.6 12.1 5.0 -2.3 24 530 A A T 3 S+ 0 0 99 -2,-2.0 -1,-0.1 1,-0.2 0, 0.0 -0.179 70.9 81.3 -78.7 47.1 15.5 5.5 -3.9 25 531 A W T 3 S+ 0 0 139 -2,-1.7 -1,-0.2 0, 0.0 -3,-0.0 0.475 86.4 56.1-122.5 -16.5 17.2 4.7 -0.6 26 532 A I S < S- 0 0 26 -3,-1.4 0, 0.0 1,-0.0 0, 0.0 -0.724 76.4-128.1-116.2 166.3 17.1 0.9 -0.8 27 533 A P S S- 0 0 103 0, 0.0 -3,-0.1 0, 0.0 -1,-0.0 0.383 98.7 -17.2 -94.0 2.4 18.3 -1.6 -3.4 28 534 A Y S >S+ 0 0 131 -5,-0.1 5,-0.7 3,-0.0 4,-0.1 0.336 108.6 93.5-177.2 -21.1 15.0 -3.4 -3.8 29 535 A F T 5S+ 0 0 114 3,-0.2 7,-0.0 2,-0.1 8,-0.0 0.823 111.6 10.6 -59.5 -30.9 12.6 -2.7 -0.9 30 536 A G T 5S+ 0 0 2 -7,-0.3 7,-0.2 3,-0.1 6,-0.1 0.776 131.5 42.8-111.4 -69.1 11.1 0.1 -3.0 31 537 A P T 5S+ 0 0 71 0, 0.0 -2,-0.1 0, 0.0 -7,-0.1 0.862 126.9 37.8 -49.0 -40.2 12.2 0.2 -6.6 32 538 A A T 5S+ 0 0 60 -4,-0.1 -3,-0.2 2,-0.0 -2,-0.1 0.804 99.6 99.1 -81.9 -31.6 11.8 -3.5 -6.8 33 539 A A < + 0 0 12 -5,-0.7 -3,-0.1 1,-0.1 -4,-0.1 -0.048 38.9 168.0 -52.8 158.1 8.6 -3.5 -4.6 34 540 A E S S+ 0 0 159 3,-0.0 4,-0.2 0, 0.0 -1,-0.1 0.476 76.0 35.9-141.6 -41.6 5.2 -3.7 -6.3 35 541 A G S S+ 0 0 41 2,-0.1 -2,-0.1 1,-0.1 -18,-0.0 -0.118 126.7 37.0-111.3 34.1 2.6 -4.4 -3.6 36 542 A I S S+ 0 0 66 -6,-0.1 3,-0.1 -19,-0.1 -1,-0.1 0.390 124.4 33.3-148.3 -35.4 4.3 -2.3 -0.9 37 543 A Y S S+ 0 0 58 -7,-0.2 2,-1.0 1,-0.1 5,-0.2 0.712 71.7 148.5 -99.7 -29.1 5.7 0.7 -2.6 38 544 A I - 0 0 48 -4,-0.2 -1,-0.1 1,-0.1 -20,-0.1 0.079 39.1-154.9 30.8 -71.0 3.0 0.9 -5.3 39 545 A E + 0 0 85 -2,-1.0 -1,-0.1 -22,-0.2 -2,-0.1 0.953 67.1 64.5 69.6 91.9 3.3 4.7 -5.5 40 546 A G S S+ 0 0 56 -3,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.262 96.0 49.8 150.1 -9.6 0.1 6.2 -6.7 41 547 A L + 0 0 34 -24,-0.1 2,-2.4 4,-0.0 4,-0.3 0.469 65.8 117.6-128.1 -11.4 -2.5 5.5 -4.0 42 548 A M + 0 0 44 1,-0.2 -26,-0.0 -26,-0.2 -29,-0.0 -0.368 34.9 121.5 -63.1 80.1 -0.8 6.5 -0.8 43 549 A H S S- 0 0 123 -2,-2.4 -1,-0.2 -3,-0.0 -27,-0.1 -0.046 89.8 -96.8-133.1 29.7 -3.4 9.2 0.0 44 550 A N + 0 0 154 -32,-0.1 2,-0.1 1,-0.1 -2,-0.1 0.950 69.7 165.7 52.3 55.8 -4.6 8.0 3.4 45 551 A Q + 0 0 23 -4,-0.3 -1,-0.1 -38,-0.1 -4,-0.0 -0.456 27.7 160.4 -96.4 172.2 -7.6 6.2 1.9 46 552 A D + 0 0 88 -2,-0.1 -1,-0.1 -41,-0.0 -38,-0.0 0.169 69.2 59.5 179.2 31.1 -10.0 3.7 3.4 47 553 A G S S+ 0 0 40 4,-0.0 4,-0.3 5,-0.0 5,-0.2 0.531 95.5 55.6-134.9 -37.8 -13.1 3.7 1.3 48 554 A L S S+ 0 0 114 2,-0.1 -3,-0.0 1,-0.1 0, 0.0 0.474 136.8 5.7 -77.8 -3.9 -12.0 2.8 -2.2 49 555 A I S S+ 0 0 14 -43,-0.0 -44,-2.8 -44,-0.0 2,-0.3 0.453 136.2 43.3-144.0 -43.0 -10.5 -0.3 -0.7 50 556 A a S S+ 0 0 22 -45,-0.2 -2,-0.1 -46,-0.2 -46,-0.1 -0.491 79.2 106.7-113.6 60.6 -11.4 -0.6 2.9 51 557 A G S S- 0 0 48 -4,-0.3 -1,-0.1 -2,-0.3 -3,-0.1 0.873 100.7 -47.8 -99.6 -58.5 -15.1 0.4 2.9 52 558 A L S S- 0 0 121 -5,-0.2 -48,-0.1 -49,-0.2 -2,-0.0 0.433 107.7 -39.7-146.4 -46.1 -17.1 -2.8 3.5 53 559 A R 0 0 130 -50,-0.0 -49,-0.2 -49,-0.0 -3,-0.1 0.182 360.0 360.0 175.6 37.9 -15.9 -5.6 1.2 54 560 A Q 0 0 104 -5,-0.2 -49,-0.5 -7,-0.1 -3,-0.1 -0.603 360.0 360.0-102.2 360.0 -15.1 -4.2 -2.2