==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-MAY-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MOTOR PROTEIN 13-MAY-11 2LD3 . COMPND 2 MOLECULE: MYOSIN VI; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR W.FENG,C.YU,M.ZHANG . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6532.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 74 84.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 65 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 16 A Q 0 0 256 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 142.2 -10.4 -25.8 1.0 2 17 A G - 0 0 59 1,-0.1 3,-0.2 0, 0.0 4,-0.1 -0.935 360.0-102.4-143.8 166.4 -10.1 -22.4 2.6 3 18 A P > + 0 0 87 0, 0.0 2,-1.5 0, 0.0 3,-1.1 0.964 51.8 159.3 -52.6 -61.8 -8.1 -19.1 2.3 4 19 A G T 3 S+ 0 0 51 1,-0.3 4,-0.3 2,-0.1 3,-0.2 -0.564 78.0 17.4 75.9 -90.8 -5.8 -19.8 5.3 5 20 A S T >> S+ 0 0 32 -2,-1.5 4,-1.2 -3,-0.2 3,-1.0 0.731 113.5 75.7 -85.2 -24.8 -2.9 -17.4 4.5 6 21 A L H <> S+ 0 0 20 -3,-1.1 4,-2.4 1,-0.3 5,-0.2 0.823 83.6 69.0 -55.2 -32.8 -4.9 -15.4 2.0 7 22 A V H 3> S+ 0 0 81 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.905 97.4 50.0 -53.3 -46.0 -6.6 -13.8 5.0 8 23 A K H <> S+ 0 0 96 -3,-1.0 4,-1.9 -4,-0.3 -1,-0.2 0.928 108.8 52.1 -59.7 -46.3 -3.4 -12.0 6.0 9 24 A V H X S+ 0 0 5 -4,-1.2 4,-1.9 1,-0.2 -1,-0.2 0.907 109.4 49.8 -56.9 -43.8 -3.0 -10.7 2.4 10 25 A G H X S+ 0 0 17 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.877 104.6 58.9 -63.7 -37.5 -6.5 -9.3 2.4 11 26 A T H X S+ 0 0 59 -4,-2.1 4,-1.6 1,-0.2 3,-0.3 0.932 106.3 47.2 -57.1 -47.9 -5.9 -7.6 5.8 12 27 A L H X S+ 0 0 5 -4,-1.9 4,-2.4 1,-0.2 -1,-0.2 0.906 104.8 60.4 -61.2 -41.0 -3.0 -5.6 4.3 13 28 A K H X S+ 0 0 45 -4,-1.9 4,-1.9 1,-0.3 -1,-0.2 0.888 104.4 50.8 -53.1 -38.6 -5.2 -4.7 1.3 14 29 A K H X S+ 0 0 151 -4,-1.7 4,-1.8 -3,-0.3 -1,-0.3 0.901 107.0 52.7 -65.9 -40.5 -7.5 -3.1 3.8 15 30 A R H X S+ 0 0 127 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.851 105.3 57.0 -63.1 -33.3 -4.6 -1.2 5.2 16 31 A L H X S+ 0 0 4 -4,-2.4 4,-1.9 2,-0.2 3,-0.3 0.945 104.8 49.2 -62.6 -49.3 -3.8 -0.0 1.7 17 32 A D H X S+ 0 0 108 -4,-1.9 4,-1.9 1,-0.2 -1,-0.2 0.876 106.8 58.0 -57.9 -37.6 -7.3 1.5 1.3 18 33 A K H X S+ 0 0 122 -4,-1.8 4,-2.0 1,-0.2 -1,-0.2 0.909 104.6 50.1 -59.0 -43.5 -6.8 3.2 4.7 19 34 A F H X S+ 0 0 26 -4,-1.7 4,-2.7 -3,-0.3 5,-0.2 0.895 105.3 57.8 -62.5 -40.5 -3.6 4.9 3.3 20 35 A N H X S+ 0 0 82 -4,-1.9 4,-2.8 2,-0.2 -1,-0.2 0.912 106.6 48.7 -56.1 -45.4 -5.6 6.1 0.3 21 36 A E H X S+ 0 0 146 -4,-1.9 4,-1.7 2,-0.2 -2,-0.2 0.965 112.6 46.0 -59.7 -55.3 -8.1 7.9 2.5 22 37 A V H < S+ 0 0 51 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.866 117.6 45.4 -56.1 -38.0 -5.4 9.6 4.6 23 38 A V H >X S+ 0 0 7 -4,-2.7 4,-1.6 1,-0.2 3,-1.5 0.831 105.6 60.3 -75.2 -33.2 -3.6 10.5 1.3 24 39 A S H 3< S+ 0 0 83 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.835 103.6 51.5 -63.0 -32.5 -6.9 11.6 -0.3 25 40 A A T 3< S+ 0 0 75 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.461 105.6 59.5 -83.1 -1.8 -7.3 14.2 2.4 26 41 A L T <4 - 0 0 26 -3,-1.5 -2,-0.2 -5,-0.2 -1,-0.1 0.918 69.7-171.2 -89.5 -56.2 -3.7 15.5 1.7 27 42 A K < + 0 0 154 -4,-1.6 2,-0.4 1,-0.2 3,-0.3 0.499 53.5 108.0 74.0 3.7 -3.9 16.5 -1.9 28 43 A D S S+ 0 0 22 -5,-0.3 -1,-0.2 1,-0.2 -2,-0.1 -0.926 79.6 4.7-116.7 138.3 -0.1 16.9 -1.8 29 44 A G S > S+ 0 0 4 -2,-0.4 4,-1.3 -3,-0.1 -1,-0.2 0.949 72.0 159.2 58.2 52.0 2.5 14.7 -3.5 30 45 A K H > + 0 0 63 -3,-0.3 4,-3.4 2,-0.2 5,-0.4 0.900 65.5 57.9 -72.1 -43.2 -0.1 12.5 -5.2 31 46 A P H > S+ 0 0 87 0, 0.0 4,-1.5 0, 0.0 -1,-0.2 0.917 109.4 44.1 -53.4 -48.9 2.2 11.1 -7.9 32 47 A E H > S+ 0 0 76 2,-0.2 4,-1.8 3,-0.2 5,-0.2 0.873 119.3 43.6 -65.5 -38.7 4.7 9.7 -5.4 33 48 A V H X S+ 0 0 3 -4,-1.3 4,-3.6 2,-0.2 5,-0.4 0.973 115.3 44.3 -72.4 -57.0 1.8 8.3 -3.2 34 49 A N H X S+ 0 0 77 -4,-3.4 4,-1.0 1,-0.2 -1,-0.2 0.790 114.7 54.4 -59.0 -26.2 -0.4 6.8 -6.0 35 50 A R H X S+ 0 0 178 -4,-1.5 4,-1.9 -5,-0.4 -1,-0.2 0.923 117.1 32.6 -73.7 -46.4 2.8 5.4 -7.5 36 51 A Q H X S+ 0 0 66 -4,-1.8 4,-1.8 2,-0.2 -2,-0.2 0.935 119.9 51.5 -75.0 -47.4 4.0 3.6 -4.4 37 52 A I H X S+ 0 0 6 -4,-3.6 4,-2.2 -5,-0.2 -3,-0.2 0.809 110.2 53.6 -57.9 -30.9 0.5 2.8 -3.3 38 53 A K H X S+ 0 0 139 -4,-1.0 4,-2.4 -5,-0.4 5,-0.2 0.965 106.9 46.4 -70.2 -55.2 -0.1 1.4 -6.8 39 54 A N H X S+ 0 0 75 -4,-1.9 4,-1.7 1,-0.2 -2,-0.2 0.785 115.3 50.6 -59.7 -25.7 2.8 -1.0 -7.0 40 55 A L H X S+ 0 0 8 -4,-1.8 4,-2.9 2,-0.2 5,-0.3 0.929 106.8 50.6 -77.4 -46.5 1.8 -2.2 -3.5 41 56 A E H X S+ 0 0 69 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.888 115.4 45.8 -56.7 -37.7 -1.9 -2.7 -4.3 42 57 A I H X S+ 0 0 95 -4,-2.4 4,-2.6 2,-0.2 -1,-0.2 0.881 109.5 55.1 -71.4 -39.9 -0.6 -4.7 -7.3 43 58 A S H X S+ 0 0 40 -4,-1.7 4,-1.9 -5,-0.2 -2,-0.2 0.964 112.4 41.2 -57.8 -55.1 1.9 -6.5 -5.1 44 59 A I H X S+ 0 0 0 -4,-2.9 4,-2.0 1,-0.2 -2,-0.2 0.933 116.3 49.7 -58.9 -47.8 -0.7 -7.8 -2.7 45 60 A D H X S+ 0 0 77 -4,-2.1 4,-2.1 -5,-0.3 -1,-0.2 0.847 105.4 59.9 -60.3 -33.9 -3.1 -8.5 -5.5 46 61 A A H X S+ 0 0 40 -4,-2.6 4,-1.4 2,-0.2 -1,-0.2 0.945 104.2 48.3 -59.6 -49.5 -0.3 -10.4 -7.2 47 62 A L H >X S+ 0 0 3 -4,-1.9 4,-2.5 2,-0.2 3,-1.0 0.950 107.2 56.1 -55.5 -52.9 0.1 -12.8 -4.2 48 63 A M H 3X S+ 0 0 40 -4,-2.0 4,-1.9 1,-0.3 3,-0.4 0.912 109.2 45.5 -45.3 -54.1 -3.7 -13.5 -4.2 49 64 A A H 3X S+ 0 0 57 -4,-2.1 4,-1.6 1,-0.3 -1,-0.3 0.775 114.6 50.8 -62.5 -24.8 -3.7 -14.6 -7.8 50 65 A K H << S+ 0 0 70 -4,-1.4 6,-0.5 -3,-1.0 -2,-0.3 0.769 105.9 54.9 -81.9 -29.1 -0.6 -16.6 -6.9 51 66 A I H < S+ 0 0 35 -4,-2.5 -2,-0.2 -3,-0.4 3,-0.2 0.864 121.3 28.7 -72.0 -37.6 -2.3 -18.2 -3.9 52 67 A K H < S+ 0 0 161 -4,-1.9 -2,-0.2 -5,-0.2 -3,-0.2 0.732 126.5 45.1 -93.9 -28.0 -5.2 -19.4 -6.0 53 68 A S S < S+ 0 0 96 -4,-1.6 2,-0.2 -5,-0.3 -2,-0.2 0.058 125.4 18.5-104.1 24.5 -3.3 -19.8 -9.3 54 69 A T S S- 0 0 80 -3,-0.2 2,-1.9 -4,-0.1 -1,-0.2 -0.861 82.6-101.7 175.9 150.1 -0.3 -21.5 -7.7 55 70 A M - 0 0 198 -2,-0.2 2,-0.2 -3,-0.1 -4,-0.1 -0.519 49.5-177.6 -83.9 72.9 0.7 -23.4 -4.5 56 71 A M - 0 0 51 -2,-1.9 2,-0.2 -6,-0.5 -2,-0.1 -0.504 26.6-117.4 -74.6 138.8 2.6 -20.5 -2.9 57 72 A T >> - 0 0 74 -2,-0.2 4,-1.3 1,-0.1 3,-0.6 -0.546 12.2-130.2 -78.1 139.4 4.3 -21.2 0.4 58 73 A R H 3> S+ 0 0 187 1,-0.3 4,-2.2 -2,-0.2 3,-0.1 0.850 109.2 61.3 -55.5 -35.0 3.0 -19.4 3.5 59 74 A E H 3> S+ 0 0 152 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.916 101.1 51.5 -58.3 -44.5 6.7 -18.5 4.2 60 75 A Q H <> S+ 0 0 109 -3,-0.6 4,-2.0 1,-0.2 -1,-0.2 0.837 110.1 50.5 -61.7 -32.9 6.9 -16.6 0.9 61 76 A I H X S+ 0 0 9 -4,-1.3 4,-2.2 2,-0.2 -1,-0.2 0.858 105.6 56.1 -73.1 -36.6 3.8 -14.7 1.9 62 77 A Q H X S+ 0 0 122 -4,-2.2 4,-1.5 2,-0.2 -2,-0.2 0.953 112.3 40.4 -60.2 -52.3 5.2 -13.8 5.3 63 78 A K H X S+ 0 0 156 -4,-2.1 4,-2.5 2,-0.2 3,-0.4 0.937 113.7 53.2 -63.5 -46.3 8.3 -12.2 3.8 64 79 A E H X S+ 0 0 41 -4,-2.0 4,-1.7 1,-0.3 -1,-0.2 0.875 106.0 55.4 -56.7 -34.2 6.3 -10.6 1.0 65 80 A Y H X S+ 0 0 48 -4,-2.2 4,-1.6 1,-0.2 -1,-0.3 0.882 107.1 49.5 -64.5 -36.3 4.1 -9.2 3.9 66 81 A D H X S+ 0 0 78 -4,-1.5 4,-2.5 -3,-0.4 -2,-0.2 0.877 104.3 58.1 -69.4 -37.1 7.3 -7.8 5.3 67 82 A A H X S+ 0 0 56 -4,-2.5 4,-1.9 1,-0.2 -1,-0.2 0.877 109.8 44.8 -59.6 -36.1 8.1 -6.2 1.9 68 83 A L H X S+ 0 0 4 -4,-1.7 4,-2.9 -5,-0.2 5,-0.3 0.817 110.0 55.1 -76.1 -31.7 4.8 -4.4 2.1 69 84 A V H X S+ 0 0 54 -4,-1.6 4,-2.3 2,-0.2 -2,-0.2 0.851 109.9 46.7 -69.4 -34.4 5.5 -3.5 5.7 70 85 A K H X S+ 0 0 145 -4,-2.5 4,-1.8 2,-0.2 -2,-0.2 0.943 119.1 38.5 -72.0 -49.2 8.8 -1.9 4.7 71 86 A S H X S+ 0 0 36 -4,-1.9 4,-1.6 -5,-0.2 -2,-0.2 0.904 120.4 47.1 -67.7 -42.3 7.3 0.0 1.8 72 87 A S H X S+ 0 0 10 -4,-2.9 4,-2.0 2,-0.2 -3,-0.2 0.933 109.3 53.4 -65.1 -47.2 4.1 0.8 3.7 73 88 A E H X S+ 0 0 108 -4,-2.3 4,-2.1 -5,-0.3 -1,-0.2 0.907 109.7 48.6 -54.3 -44.7 6.0 1.9 6.8 74 89 A D H X S+ 0 0 109 -4,-1.8 4,-2.8 1,-0.2 -1,-0.3 0.851 105.7 59.2 -64.6 -35.0 8.0 4.3 4.7 75 90 A L H X S+ 0 0 1 -4,-1.6 4,-2.7 2,-0.2 -1,-0.2 0.923 106.7 46.0 -60.2 -45.9 4.8 5.6 3.1 76 91 A L H X S+ 0 0 45 -4,-2.0 4,-2.9 2,-0.2 -2,-0.2 0.959 114.0 47.6 -61.6 -51.9 3.4 6.7 6.5 77 92 A S H X S+ 0 0 66 -4,-2.1 4,-2.0 1,-0.2 -2,-0.2 0.891 113.8 48.8 -56.1 -41.3 6.6 8.3 7.5 78 93 A A H X S+ 0 0 17 -4,-2.8 4,-1.4 2,-0.2 -1,-0.2 0.894 110.7 50.3 -66.2 -40.5 6.8 10.1 4.1 79 94 A L H X S+ 0 0 8 -4,-2.7 4,-3.1 2,-0.2 5,-0.3 0.916 107.3 54.3 -63.9 -44.1 3.2 11.2 4.5 80 95 A Q H X S+ 0 0 91 -4,-2.9 4,-2.6 1,-0.3 5,-0.3 0.941 109.7 45.8 -55.8 -50.6 3.8 12.6 7.9 81 96 A K H X S+ 0 0 78 -4,-2.0 4,-1.3 1,-0.2 -1,-0.3 0.816 113.4 54.5 -62.4 -28.7 6.7 14.7 6.7 82 97 A K H X>S+ 0 0 18 -4,-1.4 4,-1.8 2,-0.2 5,-0.6 0.964 111.6 39.2 -69.3 -55.8 4.4 15.7 3.8 83 98 A K H <5S+ 0 0 81 -4,-3.1 -2,-0.2 1,-0.2 -3,-0.2 0.935 118.4 48.2 -61.9 -47.6 1.4 16.9 5.9 84 99 A Q H <5S+ 0 0 144 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.828 109.2 55.6 -62.5 -31.4 3.6 18.6 8.5 85 100 A Q H <5S- 0 0 94 -4,-1.3 -1,-0.2 -5,-0.3 -2,-0.2 0.889 83.7-163.6 -68.1 -39.9 5.6 20.2 5.6 86 101 A E T <5 + 0 0 168 -4,-1.8 2,-0.3 -3,-0.1 -3,-0.1 0.794 60.7 86.3 58.9 28.7 2.5 21.8 4.2 87 102 A E < 0 0 152 -5,-0.6 -1,-0.1 1,-0.1 -2,-0.1 -0.916 360.0 360.0-160.9 130.6 4.4 22.3 0.9 88 103 A E 0 0 180 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.616 360.0 360.0 -74.2 360.0 5.1 20.2 -2.1