==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 30-MAY-11 2LDO . COMPND 2 MOLECULE: CYTOCHROME C3; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR L.MORGADO,V.B.PAIXAO,M.BRUIX,C.A.SALGUEIRO . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6451.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 9.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 16.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 120 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -89.3 5.9 12.8 4.6 2 2 A D + 0 0 47 1,-0.1 15,-3.7 14,-0.0 2,-0.4 0.626 360.0 88.7-122.6 -40.5 3.4 10.0 5.0 3 3 A D E +A 16 0A 111 13,-0.2 2,-0.4 14,-0.1 -1,-0.1 -0.523 55.8 175.1 -68.1 118.3 0.6 10.9 2.6 4 4 A I E -A 15 0A 69 11,-2.6 11,-2.8 -2,-0.4 2,-0.6 -0.996 21.6-149.1-131.9 128.8 1.4 9.4 -0.8 5 5 A V E -A 14 0A 94 -2,-0.4 2,-0.9 9,-0.2 9,-0.2 -0.867 7.5-153.7-100.5 121.4 -0.8 9.5 -3.8 6 6 A L E -A 13 0A 46 7,-2.9 7,-1.7 -2,-0.6 -2,-0.0 -0.817 19.7-134.3 -97.6 99.9 -0.4 6.5 -6.2 7 7 A K + 0 0 180 -2,-0.9 2,-0.3 5,-0.2 5,-0.0 -0.219 32.2 175.9 -52.5 137.3 -1.5 7.7 -9.6 8 8 A A > - 0 0 43 1,-0.0 3,-1.3 0, 0.0 4,-0.2 -0.990 40.7-140.6-150.1 140.3 -3.8 5.2 -11.3 9 9 A K T 3 S+ 0 0 200 -2,-0.3 3,-0.1 1,-0.3 -2,-0.1 0.387 110.7 49.9 -79.1 4.0 -5.7 5.2 -14.6 10 10 A N T 3 S- 0 0 100 1,-0.2 -1,-0.3 60,-0.0 61,-0.1 -0.043 137.4 -50.2-129.7 27.5 -8.4 3.6 -12.6 11 11 A G < - 0 0 11 -3,-1.3 -1,-0.2 59,-0.1 60,-0.2 0.445 66.1 -94.7 104.3 118.5 -8.6 6.0 -9.7 12 12 A D - 0 0 64 58,-0.4 58,-2.0 -4,-0.2 2,-0.5 -0.129 37.1-131.4 -56.4 156.3 -5.6 7.3 -7.6 13 13 A V E -AB 6 69A 18 -7,-1.7 -7,-2.9 56,-0.2 2,-0.8 -0.969 6.6-142.9-119.3 125.9 -4.9 5.5 -4.4 14 14 A K E -A 5 0A 131 54,-0.7 -9,-0.2 -2,-0.5 -11,-0.0 -0.786 21.7-173.4 -90.4 110.0 -4.4 7.4 -1.1 15 15 A F E -A 4 0A 56 -11,-2.8 -11,-2.6 -2,-0.8 2,-1.1 -0.921 17.7-146.6-111.3 122.2 -1.7 5.6 0.9 16 16 A P E > -A 3 0A 43 0, 0.0 2,-1.9 0, 0.0 4,-1.0 -0.746 8.3-167.1 -86.5 96.0 -1.0 6.7 4.4 17 17 A H T 4 S+ 0 0 57 -15,-3.7 -14,-0.1 -2,-1.1 -2,-0.0 -0.267 79.8 54.6 -80.2 50.5 2.7 6.1 4.9 18 18 A K T >> S+ 0 0 124 -2,-1.9 3,-3.7 -16,-0.1 4,-1.0 0.398 98.1 47.8-140.4 -68.1 2.3 6.6 8.6 19 19 A A H 3> S+ 0 0 62 1,-0.3 4,-1.5 2,-0.2 5,-0.2 0.756 106.6 65.4 -54.5 -24.4 -0.3 4.4 10.2 20 20 A H H 3< S+ 0 0 71 -4,-1.0 -1,-0.3 1,-0.2 4,-0.1 0.448 98.6 56.4 -77.5 -0.2 1.5 1.7 8.3 21 21 A Q H <4 S+ 0 0 81 -3,-3.7 -2,-0.2 2,-0.2 -1,-0.2 0.882 108.4 39.2 -94.4 -53.8 4.4 2.4 10.5 22 22 A K H < S+ 0 0 198 -4,-1.0 -2,-0.2 1,-0.2 -3,-0.1 0.774 121.3 48.4 -67.3 -26.7 3.0 1.9 13.9 23 23 A A S < S+ 0 0 78 -4,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.757 130.4 21.1 -82.7 -27.8 1.1 -1.0 12.5 24 24 A V + 0 0 45 -5,-0.2 -1,-0.2 -4,-0.1 5,-0.2 -0.479 68.3 174.7-140.6 63.2 4.2 -2.4 10.9 25 25 A P + 0 0 99 0, 0.0 2,-0.6 0, 0.0 -3,-0.1 0.719 62.3 93.0 -41.0 -26.7 7.1 -0.8 12.8 26 26 A D - 0 0 79 1,-0.2 3,-0.5 -3,-0.1 4,-0.3 -0.661 52.6-179.7 -78.6 115.5 9.2 -3.1 10.6 27 27 A C S > S+ 0 0 81 -2,-0.6 4,-1.9 1,-0.2 3,-0.4 0.634 79.4 70.4 -86.6 -17.2 10.2 -1.1 7.5 28 28 A K T 4 S+ 0 0 165 1,-0.2 -1,-0.2 2,-0.2 -2,-0.1 0.519 82.4 77.9 -75.7 -5.2 12.0 -4.2 6.3 29 29 A K T 4 S+ 0 0 146 -3,-0.5 -1,-0.2 -5,-0.2 -2,-0.2 0.960 117.8 6.1 -67.1 -53.4 8.6 -5.6 5.8 30 30 A C T 4 S+ 0 0 89 -3,-0.4 2,-0.9 -4,-0.3 -2,-0.2 0.872 123.3 70.7 -94.6 -53.2 8.0 -3.7 2.6 31 31 A H < + 0 0 28 -4,-1.9 3,-0.2 1,-0.2 -1,-0.1 -0.573 54.6 165.6 -71.3 105.3 11.3 -2.1 2.1 32 32 A E S S+ 0 0 179 -2,-0.9 -1,-0.2 2,-0.2 6,-0.1 0.904 79.4 38.1 -85.9 -49.6 13.6 -5.0 1.1 33 33 A K S S- 0 0 182 1,-0.4 -1,-0.2 3,-0.0 -2,-0.1 -0.055 131.4 -86.9 -91.9 31.2 16.5 -3.0 -0.2 34 34 A G S S- 0 0 28 -3,-0.2 -1,-0.4 -7,-0.1 -2,-0.2 -0.072 73.3 -28.2 87.0 169.9 16.0 -0.5 2.5 35 35 A P S S+ 0 0 115 0, 0.0 2,-0.3 0, 0.0 -7,-0.0 -0.238 98.9 65.4 -55.0 141.3 13.8 2.6 2.7 36 36 A G S S- 0 0 46 2,-0.0 -2,-0.1 0, 0.0 2,-0.0 -0.908 89.0 -13.7 139.7-165.9 13.1 4.2 -0.6 37 37 A K - 0 0 214 -2,-0.3 2,-0.6 1,-0.1 0, 0.0 -0.344 61.0-127.9 -69.5 151.5 11.4 3.6 -3.9 38 38 A I - 0 0 76 -7,-0.1 2,-0.4 -6,-0.1 3,-0.2 -0.918 16.6-144.3-107.7 119.1 10.3 0.0 -4.6 39 39 A E S S+ 0 0 154 -2,-0.6 3,-0.1 1,-0.2 0, 0.0 -0.668 82.9 19.2 -84.2 132.4 11.4 -1.4 -8.0 40 40 A G S S+ 0 0 76 -2,-0.4 -1,-0.2 1,-0.3 5,-0.2 -0.200 85.8 141.2 104.7 -39.2 9.0 -3.7 -9.7 41 41 A F + 0 0 79 -3,-0.2 -1,-0.3 4,-0.1 2,-0.3 0.132 21.8 121.0 -33.6 150.1 6.0 -2.5 -7.7 42 42 A G S > S- 0 0 29 1,-0.2 4,-3.9 -3,-0.1 5,-0.2 -0.949 70.9 -46.0 176.5-160.4 2.8 -2.3 -9.8 43 43 A K H >>S+ 0 0 136 -2,-0.3 4,-2.7 2,-0.2 5,-0.7 0.992 130.5 45.1 -57.9 -78.2 -0.8 -3.4 -10.1 44 44 A E H >5S+ 0 0 141 1,-0.3 4,-1.9 2,-0.2 6,-0.2 0.792 119.2 49.0 -34.9 -37.9 -0.3 -7.2 -9.6 45 45 A M H 4>S+ 0 0 77 2,-0.2 5,-1.9 -5,-0.2 6,-0.7 0.969 111.1 45.3 -69.3 -56.5 1.9 -6.1 -6.8 46 46 A A H <>S+ 0 0 18 -4,-3.9 5,-2.6 4,-0.3 6,-1.1 0.938 124.3 35.8 -51.8 -53.1 -0.5 -3.7 -5.1 47 47 A H H <5S+ 0 0 64 -4,-2.7 6,-0.4 4,-0.2 -1,-0.2 0.841 124.3 51.3 -69.5 -34.6 -3.3 -6.2 -5.5 48 48 A G T >>S+ 0 0 58 -6,-1.1 4,-2.5 1,-0.3 5,-0.7 0.899 108.6 71.8 -42.2 -52.3 -4.4 -5.9 -0.5 53 53 A G H 3>5S+ 0 0 73 -3,-0.8 4,-1.9 2,-0.2 6,-0.3 0.946 118.6 54.3 -58.7 -50.6 -1.3 -7.9 3.4 55 55 A H H >X>S+ 0 0 28 -4,-2.0 4,-1.6 1,-0.3 5,-1.2 0.955 113.3 38.6 -45.8 -71.2 -4.8 -6.5 3.9 56 56 A E H 3<5S+ 0 0 94 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.718 108.3 71.6 -54.0 -21.1 -6.6 -9.7 3.0 57 57 A E H 3< S- 0 0 149 1,-0.1 3,-0.8 -12,-0.0 4,-0.3 -0.629 86.9 -98.6 -97.2 157.0 -12.7 -4.0 -1.9 65 65 A C T 3 S+ 0 0 120 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.1 -0.300 105.6 34.2 -70.0 157.7 -12.5 -1.7 -4.9 66 66 A G T 3 S+ 0 0 34 1,-0.1 -1,-0.2 -55,-0.1 5,-0.1 -0.086 99.5 82.8 88.1 -34.4 -13.4 1.9 -4.5 67 67 A E S < S+ 0 0 126 -3,-0.8 -2,-0.2 1,-0.1 3,-0.1 0.680 110.1 20.9 -72.9 -18.6 -11.9 1.9 -1.0 68 68 A C S S+ 0 0 34 -4,-0.3 2,-1.0 1,-0.2 -54,-0.7 0.724 119.8 61.8-113.1 -49.1 -8.5 2.4 -2.6 69 69 A H B +B 13 0A 44 -56,-0.2 2,-0.6 -59,-0.1 -1,-0.2 -0.749 66.8 179.9 -87.3 104.6 -9.4 3.9 -6.0 70 70 A K 0 0 142 -58,-2.0 -58,-0.4 -2,-1.0 -59,-0.1 -0.934 360.0 360.0-111.1 116.0 -11.2 7.1 -5.4 71 71 A K 0 0 219 -2,-0.6 -1,-0.1 -60,-0.2 -60,-0.1 0.454 360.0 360.0 -67.8 360.0 -12.3 9.1 -8.4