==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JUL-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 01-JUN-11 2LDR . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE CBL-B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.KUMETA,Y.KOBASHIGAWA,F.INAGAKI . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5536.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 51.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 9.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 345 A G 0 0 107 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -58.8 2.1 0.0 -1.2 2 346 A P + 0 0 88 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.103 360.0 64.0 -74.9 177.9 -0.3 2.2 -3.3 3 347 A H + 0 0 109 72,-0.1 4,-0.1 3,-0.1 71,-0.0 0.928 59.6 174.7 70.8 47.3 -1.1 5.8 -2.7 4 348 A M + 0 0 163 2,-0.1 3,-0.1 71,-0.1 0, 0.0 0.956 59.2 49.4 -46.1 -75.3 2.5 7.0 -3.3 5 349 A G S S- 0 0 53 1,-0.1 2,-0.4 70,-0.1 0, 0.0 0.107 105.6 -82.0 -57.6 178.5 1.8 10.7 -3.0 6 350 A S - 0 0 51 69,-0.1 71,-0.3 71,-0.1 -1,-0.1 -0.735 42.6-134.3 -91.5 135.2 -0.1 12.3 -0.2 7 351 A D - 0 0 81 -2,-0.4 71,-2.9 69,-0.2 2,-0.4 -0.202 14.0-127.1 -78.5 174.4 -3.9 12.3 -0.3 8 352 A H E -a 78 0A 137 69,-0.2 2,-0.3 71,-0.0 71,-0.2 -0.993 19.0-165.8-131.4 126.5 -6.1 15.2 0.4 9 353 A I E -a 79 0A 39 69,-1.7 71,-0.7 -2,-0.4 2,-0.4 -0.833 11.5-141.0-111.3 149.2 -9.0 15.2 2.9 10 354 A K E -a 80 0A 143 -2,-0.3 2,-0.2 69,-0.1 72,-0.1 -0.926 13.6-137.6-112.8 133.3 -11.7 17.8 3.2 11 355 A V - 0 0 1 69,-1.0 2,-0.3 -2,-0.4 3,-0.0 -0.592 15.4-142.6 -87.7 149.5 -13.1 18.9 6.5 12 356 A T >> - 0 0 45 -2,-0.2 4,-1.7 70,-0.1 3,-0.6 -0.854 22.9-118.5-114.1 149.2 -16.8 19.5 7.1 13 357 A Q H 3> S+ 0 0 108 -2,-0.3 4,-3.0 1,-0.3 5,-0.2 0.823 115.0 63.0 -50.2 -34.3 -18.6 22.1 9.2 14 358 A E H 3> S+ 0 0 119 2,-0.2 4,-2.8 3,-0.2 -1,-0.3 0.943 104.9 44.0 -56.3 -52.5 -19.9 19.2 11.2 15 359 A Q H <> S+ 0 0 47 -3,-0.6 4,-3.1 2,-0.2 5,-0.4 0.985 115.6 44.9 -55.8 -67.2 -16.4 18.2 12.3 16 360 A Y H X S+ 0 0 95 -4,-1.7 4,-1.5 1,-0.3 -1,-0.2 0.869 115.5 50.0 -44.2 -45.8 -15.2 21.7 13.1 17 361 A E H X S+ 0 0 118 -4,-3.0 4,-1.2 -5,-0.3 -1,-0.3 0.898 110.4 49.7 -61.6 -42.7 -18.5 22.3 14.9 18 362 A L H >< S+ 0 0 105 -4,-2.8 3,-0.6 -3,-0.4 -2,-0.2 0.942 118.3 38.2 -61.1 -49.4 -18.1 19.1 16.8 19 363 A X H >X>S+ 0 0 79 -4,-3.1 4,-2.2 1,-0.2 5,-1.3 0.643 103.1 74.4 -76.2 -14.9 -14.6 20.0 17.8 20 364 A C H 3<5S+ 0 0 70 -4,-1.5 -1,-0.2 -5,-0.4 -2,-0.2 0.863 89.1 58.4 -64.9 -36.5 -15.6 23.6 18.2 21 365 A E T <<5S+ 0 0 168 -4,-1.2 -1,-0.3 -3,-0.6 -2,-0.2 0.565 112.6 42.1 -68.7 -7.8 -17.4 22.6 21.4 22 366 A M T <45S- 0 0 132 -3,-1.3 -2,-0.2 2,-0.1 -1,-0.2 0.725 109.2-122.1-106.2 -35.0 -14.0 21.4 22.5 23 367 A G T <5S+ 0 0 68 -4,-2.2 2,-0.2 1,-0.3 -3,-0.2 0.874 71.3 102.5 90.5 47.0 -11.8 24.3 21.3 24 368 A S < - 0 0 37 -5,-1.3 2,-0.4 -8,-0.2 -1,-0.3 -0.777 65.7-106.2-142.9-174.6 -9.4 22.4 19.0 25 369 A T - 0 0 49 -2,-0.2 3,-0.1 1,-0.2 -9,-0.0 -0.968 13.5-138.7-126.5 140.9 -8.8 21.6 15.4 26 370 A F S S+ 0 0 17 -2,-0.4 -1,-0.2 1,-0.2 4,-0.1 0.989 105.2 50.8 -56.2 -71.0 -9.3 18.4 13.4 27 371 A Q S S+ 0 0 20 9,-0.1 10,-2.6 2,-0.1 2,-0.4 0.765 95.5 94.4 -38.5 -30.4 -6.1 18.4 11.4 28 372 A L B S-B 36 0B 36 8,-0.3 8,-0.2 9,-0.1 -3,-0.0 -0.533 90.4-114.9 -71.5 122.8 -4.5 18.9 14.8 29 373 A C > - 0 0 0 6,-2.0 4,-0.6 -2,-0.4 19,-0.1 -0.338 14.0-149.8 -59.1 134.8 -3.5 15.6 16.3 30 374 A K T 4 S+ 0 0 59 17,-0.2 -1,-0.1 1,-0.1 6,-0.1 -0.090 87.7 66.0 -97.3 32.3 -5.5 14.7 19.4 31 375 A I T 4 S+ 0 0 78 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.739 124.3 0.1-113.4 -59.6 -2.5 12.8 20.7 32 376 A C T 4 S- 0 0 59 3,-0.2 -2,-0.1 0, 0.0 -4,-0.0 0.513 81.8-145.4-108.3 -13.9 0.3 15.2 21.4 33 377 A A S < S+ 0 0 59 -4,-0.6 -3,-0.1 2,-0.2 3,-0.1 0.871 76.6 97.4 47.7 41.8 -1.8 18.2 20.3 34 378 A E S S+ 0 0 148 1,-0.4 2,-0.3 2,-0.1 -1,-0.1 0.635 82.4 22.8-122.9 -41.0 1.5 19.6 19.0 35 379 A N S S- 0 0 79 1,-0.1 -6,-2.0 -6,-0.1 -1,-0.4 -0.768 85.2 -93.8-125.6 170.8 1.5 18.7 15.3 36 380 A D B -B 28 0B 75 -2,-0.3 -8,-0.3 -8,-0.2 -1,-0.1 -0.167 33.7-113.4 -76.7 175.5 -1.1 17.9 12.7 37 381 A K + 0 0 1 -10,-2.6 13,-1.3 12,-0.2 14,-0.2 0.981 34.8 176.6 -73.8 -62.4 -2.2 14.4 11.7 38 382 A D + 0 0 73 1,-0.2 2,-0.3 -11,-0.2 39,-0.1 0.772 61.3 72.0 59.9 25.9 -0.8 14.3 8.2 39 383 A V - 0 0 13 37,-0.3 9,-0.4 9,-0.2 2,-0.3 -0.948 63.8-151.5-158.0 171.8 -2.1 10.7 8.2 40 384 A K E -C 75 0C 55 35,-0.6 35,-0.7 -2,-0.3 2,-0.4 -0.980 12.0-137.1-155.2 142.0 -5.2 8.6 8.1 41 385 A I E > -C 74 0C 7 5,-2.0 4,-1.6 -2,-0.3 5,-0.5 -0.872 36.9-115.5-105.2 133.9 -6.2 5.2 9.4 42 386 A E E 4 S-C 73 0C 96 31,-2.3 30,-2.8 -2,-0.4 31,-1.7 -0.925 72.9 -7.9-137.8 161.2 -8.3 2.8 7.3 43 387 A P T 4 S+ 0 0 84 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.967 132.2 57.8 -75.0 -5.8 -10.5 1.4 6.7 44 388 A C T 4 S- 0 0 62 1,-0.1 -2,-0.3 29,-0.1 27,-0.0 0.897 94.6-134.5 -37.4 -76.7 -11.3 2.6 10.2 45 389 A G < + 0 0 24 -4,-1.6 2,-0.5 1,-0.3 -3,-0.2 0.648 48.1 146.2 118.2 34.8 -11.0 6.3 9.5 46 390 A H - 0 0 60 -5,-0.5 -5,-2.0 2,-0.0 -1,-0.3 -0.885 31.6-153.9-105.8 130.8 -9.0 7.6 12.4 47 391 A L + 0 0 11 -2,-0.5 2,-0.3 -7,-0.2 -17,-0.2 -0.672 25.4 144.0-101.1 156.7 -6.6 10.4 11.9 48 392 A M - 0 0 1 -9,-0.4 2,-0.7 -2,-0.3 -9,-0.2 -0.971 52.7 -75.4-173.6 176.2 -3.4 11.2 13.9 49 393 A C >> - 0 0 2 -2,-0.3 4,-2.6 1,-0.2 3,-1.7 -0.824 31.4-153.2 -94.0 114.9 0.1 12.4 13.9 50 394 A T H 3> S+ 0 0 61 -13,-1.3 4,-2.4 -2,-0.7 5,-0.3 0.935 97.4 58.6 -48.4 -56.6 2.5 9.8 12.4 51 395 A S H 34 S+ 0 0 97 1,-0.3 4,-0.3 2,-0.2 -1,-0.3 0.754 113.1 42.8 -45.8 -26.0 5.4 11.2 14.4 52 396 A C H X> S+ 0 0 11 -3,-1.7 4,-1.3 2,-0.2 3,-1.1 0.856 105.7 61.1 -87.6 -42.5 3.1 10.4 17.3 53 397 A L H >X S+ 0 0 31 -4,-2.6 4,-2.7 1,-0.3 3,-1.5 0.931 98.3 57.6 -48.0 -54.6 2.0 7.0 16.0 54 398 A T H 3X S+ 0 0 72 -4,-2.4 4,-1.1 1,-0.3 -1,-0.3 0.825 101.9 57.4 -45.6 -36.5 5.5 5.8 16.0 55 399 A A H <4 S+ 0 0 62 -3,-1.1 -1,-0.3 -4,-0.3 4,-0.2 0.882 109.5 43.8 -63.1 -39.6 5.5 6.6 19.7 56 400 A W H XX S+ 0 0 51 -3,-1.5 4,-2.4 -4,-1.3 3,-2.3 0.957 115.0 46.7 -69.2 -52.6 2.5 4.3 20.1 57 401 A Q H 3< S+ 0 0 90 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.669 108.3 59.9 -62.7 -16.3 4.0 1.6 17.9 58 402 A E T 3< S+ 0 0 160 -4,-1.1 -1,-0.3 -5,-0.4 -2,-0.2 0.565 113.4 35.5 -86.8 -11.4 7.1 2.2 20.0 59 403 A S T <4 S- 0 0 110 -3,-2.3 -2,-0.2 -4,-0.2 -1,-0.1 0.594 147.0 -29.1-111.9 -23.0 5.2 1.2 23.1 60 404 A D < - 0 0 79 -4,-2.4 -3,-0.2 -5,-0.1 3,-0.1 0.049 56.6-145.0-153.2 -88.5 3.0 -1.5 21.6 61 405 A G + 0 0 23 -5,-0.2 2,-1.4 2,-0.2 -4,-0.1 0.697 35.5 156.6 108.3 32.6 2.0 -1.4 18.0 62 406 A Q - 0 0 86 1,-0.2 -1,-0.1 -6,-0.1 7,-0.1 -0.644 60.7 -92.5 -91.3 79.3 -1.5 -2.9 18.3 63 407 A G S S+ 0 0 0 -2,-1.4 7,-0.3 5,-0.2 -1,-0.2 0.069 96.2 2.5 43.9-159.1 -3.1 -1.5 15.1 64 408 A C B >> -D 69 0D 0 5,-2.9 5,-1.0 1,-0.2 4,-0.9 -0.341 64.9-148.1 -56.4 125.6 -4.9 1.8 15.4 65 409 A P T 45S+ 0 0 32 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.480 95.9 62.5 -75.0 -2.5 -4.6 3.0 19.0 66 410 A F T 45S+ 0 0 75 3,-0.2 -2,-0.1 1,-0.1 -3,-0.1 0.824 124.2 12.9 -89.1 -37.9 -8.0 4.6 18.6 67 411 A C T 45S- 0 0 53 -3,-0.4 -3,-0.1 2,-0.2 3,-0.1 0.177 97.1-129.1-121.2 10.4 -9.9 1.4 17.9 68 412 A R T <5 + 0 0 139 -4,-0.9 2,-0.3 1,-0.2 -5,-0.2 0.865 69.0 124.2 38.7 49.9 -7.1 -0.9 19.1 69 413 A C B < -D 64 0D 75 -5,-1.0 -5,-2.9 -7,-0.1 -2,-0.2 -0.978 69.4 -90.3-138.1 148.8 -7.5 -2.8 15.8 70 414 A E - 0 0 134 -2,-0.3 2,-0.3 -7,-0.3 -8,-0.1 -0.040 42.2-126.0 -52.2 159.0 -5.1 -3.7 13.0 71 415 A I + 0 0 38 1,-0.1 3,-0.1 -28,-0.1 -1,-0.1 -0.865 28.5 174.6-113.8 147.4 -4.8 -1.2 10.1 72 416 A K S S+ 0 0 177 -30,-2.8 2,-0.5 -2,-0.3 -1,-0.1 0.703 72.6 44.1-114.8 -44.3 -5.3 -2.0 6.4 73 417 A G E +C 42 0C 23 -31,-1.7 -31,-2.3 2,-0.0 -1,-0.3 -0.928 65.5 151.5-111.8 127.8 -5.0 1.4 4.8 74 418 A T E +C 41 0C 80 -2,-0.5 -33,-0.1 -33,-0.2 -35,-0.0 -0.965 4.9 139.0-156.2 136.3 -2.4 3.9 5.8 75 419 A E E -C 40 0C 24 -35,-0.7 2,-1.0 -2,-0.3 -35,-0.6 -0.953 56.4 -85.9-172.0 156.1 -0.6 6.8 4.1 76 420 A P + 0 0 78 0, 0.0 -37,-0.3 0, 0.0 -69,-0.2 -0.608 55.5 175.1 -74.9 101.9 0.7 10.3 4.6 77 421 A I - 0 0 3 -2,-1.0 2,-0.6 -71,-0.3 -69,-0.2 -0.587 31.1-119.8-103.9 167.7 -2.3 12.5 3.7 78 422 A I E -a 8 0A 58 -71,-2.9 -69,-1.7 -2,-0.2 2,-0.3 -0.938 22.8-145.9-114.0 112.2 -2.7 16.2 3.9 79 423 A V E -a 9 0A 15 -2,-0.6 -69,-0.1 -71,-0.2 -43,-0.0 -0.564 16.1-168.1 -77.4 136.7 -5.5 17.4 6.2 80 424 A D E -a 10 0A 69 -71,-0.7 -69,-1.0 -2,-0.3 -2,-0.0 -0.996 12.1-135.8-131.3 131.9 -7.3 20.6 5.1 81 425 A P 0 0 69 0, 0.0 -70,-0.2 0, 0.0 -56,-0.0 -0.114 360.0 360.0 -75.0 177.0 -9.7 22.7 7.2 82 426 A F 0 0 130 -70,-0.1 -70,-0.1 -72,-0.1 -72,-0.0 -0.758 360.0 360.0-110.6 360.0 -13.0 24.1 6.0