==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION/DNA 13-OCT-98 2LEF . COMPND 2 MOLECULE: PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR); . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR X.LI,J.J.LOVE,D.A.CASE,P.E.WRIGHT . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7263.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 73.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 179 0, 0.0 2,-2.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.1 -8.5 -1.3 -28.9 2 2 A H - 0 0 109 1,-0.1 2,-1.1 73,-0.0 72,-0.1 -0.553 360.0-160.0 -70.6 85.4 -8.1 -1.2 -25.2 3 3 A I - 0 0 24 -2,-2.0 71,-0.2 1,-0.1 72,-0.1 -0.633 20.0-129.7 -77.8 101.1 -4.6 0.4 -25.4 4 4 A K - 0 0 127 -2,-1.1 -1,-0.1 1,-0.1 69,-0.0 0.042 27.2 -86.6 -45.8 152.7 -3.3 -0.5 -22.0 5 5 A K - 0 0 76 1,-0.1 2,-1.3 58,-0.0 -1,-0.1 -0.325 54.5 -92.9 -56.0 147.0 -1.7 2.1 -19.7 6 6 A P - 0 0 34 0, 0.0 -1,-0.1 0, 0.0 54,-0.1 -0.553 54.1-124.1 -66.8 96.3 2.1 2.6 -20.4 7 7 A L - 0 0 59 -2,-1.3 2,-0.1 1,-0.1 53,-0.1 0.035 24.3-135.8 -39.1 143.2 3.4 0.1 -17.7 8 8 A N >> - 0 0 83 51,-0.1 4,-1.5 52,-0.0 3,-1.0 -0.401 34.0 -75.0 -98.9 179.3 5.8 1.3 -15.1 9 9 A A H >> S+ 0 0 5 1,-0.3 4,-2.4 2,-0.2 3,-0.5 0.840 125.1 45.3 -38.9 -63.4 9.1 -0.0 -13.6 10 10 A F H 3> S+ 0 0 74 1,-0.3 4,-2.8 2,-0.2 -1,-0.3 0.778 106.3 60.9 -68.3 -23.5 7.8 -2.8 -11.3 11 11 A M H <> S+ 0 0 72 -3,-1.0 4,-2.8 2,-0.2 -1,-0.3 0.903 109.6 42.5 -69.3 -38.6 5.4 -4.1 -14.0 12 12 A L H S+ 0 0 38 -4,-2.8 4,-2.8 2,-0.2 5,-0.5 0.980 109.6 53.0 -54.2 -62.7 7.3 -8.5 -12.8 15 15 A K H <5S+ 0 0 148 -4,-2.8 4,-0.4 1,-0.2 -2,-0.2 0.854 119.4 36.7 -45.1 -43.5 7.1 -9.4 -16.5 16 16 A E H X5S+ 0 0 99 -4,-2.9 4,-0.6 2,-0.1 -2,-0.2 0.984 130.9 23.5 -71.4 -66.1 10.8 -10.4 -16.3 17 17 A M H X5S+ 0 0 42 -4,-3.0 4,-2.9 -5,-0.2 -3,-0.2 0.788 105.6 74.5 -79.8 -32.2 11.3 -12.0 -12.9 18 18 A R H X5S+ 0 0 100 -4,-2.8 4,-3.1 -5,-0.5 5,-0.2 0.890 95.6 53.1 -54.9 -43.2 7.8 -13.2 -12.0 19 19 A A H >> - 0 0 113 1,-0.1 4,-2.7 4,-0.1 3,-0.9 -0.075 60.1-143.8 -39.3 106.3 -1.0 -16.4 -6.6 30 30 A S H 3> S+ 0 0 65 1,-0.3 4,-3.2 2,-0.2 5,-0.3 0.859 93.0 55.6 -53.6 -47.6 -0.2 -13.0 -8.1 31 31 A A H 3> S+ 0 0 73 2,-0.2 4,-1.3 1,-0.2 -1,-0.3 0.872 115.8 38.7 -56.8 -38.5 -0.8 -10.9 -4.9 32 32 A A H <> S+ 0 0 34 -3,-0.9 4,-2.4 2,-0.2 3,-0.3 0.960 116.8 50.9 -71.1 -50.9 1.8 -13.0 -3.0 33 33 A I H X S+ 0 0 0 -4,-2.7 4,-2.4 1,-0.2 -2,-0.2 0.827 107.9 54.0 -53.3 -34.9 4.1 -13.2 -6.0 34 34 A N H X S+ 0 0 54 -4,-3.2 4,-2.6 -5,-0.3 -1,-0.2 0.878 105.9 50.9 -75.0 -36.1 3.9 -9.4 -6.4 35 35 A Q H X S+ 0 0 146 -4,-1.3 4,-2.8 -3,-0.3 -2,-0.2 0.905 107.2 55.5 -64.5 -37.9 5.0 -8.9 -2.8 36 36 A I H X S+ 0 0 51 -4,-2.4 4,-3.2 2,-0.2 -2,-0.3 0.957 106.0 49.5 -55.0 -49.9 7.8 -11.3 -3.8 37 37 A L H X S+ 0 0 4 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.938 108.1 55.5 -53.1 -45.2 8.6 -8.8 -6.6 38 38 A G H X S+ 0 0 25 -4,-2.6 4,-0.7 1,-0.2 3,-0.3 0.938 111.8 41.8 -47.6 -54.9 8.5 -6.1 -3.8 39 39 A R H >< S+ 0 0 132 -4,-2.8 3,-1.9 1,-0.2 4,-0.3 0.951 111.2 55.9 -55.6 -52.8 11.1 -8.1 -1.9 40 40 A R H >< S+ 0 0 64 -4,-3.2 3,-1.8 1,-0.3 4,-0.4 0.782 93.7 69.5 -59.3 -28.6 13.2 -8.8 -5.0 41 41 A W H >< S+ 0 0 22 -4,-2.2 3,-2.2 1,-0.3 -1,-0.3 0.885 88.0 65.9 -52.5 -38.5 13.4 -5.1 -5.7 42 42 A H T << S+ 0 0 151 -3,-1.9 -1,-0.3 -4,-0.7 -2,-0.2 0.679 93.9 59.8 -61.3 -19.7 15.6 -4.8 -2.7 43 43 A A T < S+ 0 0 49 -3,-1.8 2,-0.4 -4,-0.3 -1,-0.3 0.654 82.7 103.1 -79.4 -19.2 18.2 -6.9 -4.6 44 44 A L S < S- 0 0 15 -3,-2.2 -3,-0.0 -4,-0.4 5,-0.0 -0.544 70.2-134.5 -74.0 122.4 18.5 -4.3 -7.4 45 45 A S > - 0 0 47 -2,-0.4 4,-3.0 1,-0.1 5,-0.2 -0.269 36.2 -97.8 -59.1 158.9 21.6 -2.1 -7.3 46 46 A R H > S+ 0 0 203 1,-0.2 4,-3.1 2,-0.2 5,-0.1 0.851 128.8 50.8 -50.8 -36.9 20.9 1.6 -7.8 47 47 A E H > S+ 0 0 105 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.944 109.1 48.5 -67.0 -49.9 21.9 1.1 -11.5 48 48 A E H > S+ 0 0 87 2,-0.2 4,-0.9 1,-0.2 -2,-0.2 0.912 113.9 48.6 -56.2 -43.2 19.5 -1.9 -11.9 49 49 A Q H >X S+ 0 0 64 -4,-3.0 3,-1.9 1,-0.2 4,-0.8 0.987 109.6 51.1 -56.7 -59.2 16.8 0.2 -10.3 50 50 A A H >X S+ 0 0 43 -4,-3.1 4,-2.2 1,-0.3 3,-1.3 0.848 99.2 66.3 -46.9 -43.6 17.6 3.1 -12.7 51 51 A K H 3X S+ 0 0 65 -4,-2.7 4,-3.1 1,-0.3 -1,-0.3 0.849 97.6 55.0 -47.6 -40.1 17.3 0.8 -15.7 52 52 A Y H X S+ 0 0 66 -4,-3.0 4,-3.1 2,-0.2 3,-0.6 0.970 107.9 50.4 -53.3 -54.6 6.8 3.4 -27.6 63 63 A H H 3X S+ 0 0 28 -4,-3.1 4,-2.8 1,-0.2 7,-0.2 0.922 111.8 47.5 -42.1 -55.6 3.2 4.0 -26.5 64 64 A M H 3< S+ 0 0 95 -4,-2.2 -1,-0.2 2,-0.2 -2,-0.2 0.811 115.3 45.9 -60.8 -31.3 3.5 7.6 -27.8 65 65 A Q H << S+ 0 0 128 -4,-2.4 -2,-0.2 -3,-0.6 -1,-0.2 0.956 117.3 40.9 -78.3 -53.0 5.0 6.3 -31.1 66 66 A L H < S+ 0 0 101 -4,-3.1 -2,-0.2 1,-0.3 -3,-0.2 0.866 134.3 23.4 -58.2 -40.8 2.5 3.5 -31.8 67 67 A Y S >< S- 0 0 88 -4,-2.8 3,-2.8 -5,-0.4 -1,-0.3 -0.722 84.5-141.3-136.0 83.2 -0.3 5.7 -30.6 68 68 A P T 3 S- 0 0 114 0, 0.0 3,-0.1 0, 0.0 -4,-0.1 -0.206 86.9 -12.5 -46.1 103.9 0.4 9.5 -30.9 69 69 A G T 3 S+ 0 0 40 1,-0.2 2,-0.6 -2,-0.2 -5,-0.1 0.718 80.7 175.0 71.5 25.2 -1.2 11.0 -27.8 70 70 A W < - 0 0 61 -3,-2.8 2,-0.3 -7,-0.2 -1,-0.2 -0.515 27.0-140.0 -61.2 113.5 -3.2 8.0 -26.7 71 71 A S - 0 0 70 -2,-0.6 -1,-0.0 -3,-0.1 -66,-0.0 -0.645 18.5-113.8 -81.7 134.2 -4.6 9.2 -23.4 72 72 A A S S+ 0 0 47 -2,-0.3 2,-2.2 1,-0.2 3,-0.2 0.661 85.7 102.2 -39.9 -47.3 -4.5 6.5 -20.7 73 73 A R + 0 0 142 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 -0.218 29.9 131.8 -55.7 73.5 -8.3 6.0 -20.2 74 74 A D S S+ 0 0 22 -2,-2.2 -1,-0.2 -71,-0.2 -70,-0.1 0.599 96.0 2.1 -90.2 -20.3 -8.9 2.7 -22.2 75 75 A N S >> S+ 0 0 41 -3,-0.2 3,-2.4 -72,-0.1 4,-0.6 0.093 84.2 164.2-152.6 20.9 -10.8 1.2 -19.2 76 76 A Y T 34 S+ 0 0 190 1,-0.3 -3,-0.0 2,-0.1 0, 0.0 -0.286 79.0 0.4 -58.0 123.6 -10.9 4.0 -16.5 77 77 A G T 34 S+ 0 0 64 2,-0.1 -1,-0.3 1,-0.0 -4,-0.0 0.676 101.9 109.6 69.8 21.8 -13.6 3.0 -13.9 78 78 A K T <4 + 0 0 149 -3,-2.4 2,-0.3 2,-0.0 -2,-0.1 0.876 68.5 60.4 -89.4 -48.3 -14.5 -0.3 -15.7 79 79 A K S < S- 0 0 158 -4,-0.6 -2,-0.1 1,-0.1 -4,-0.0 -0.618 83.6-140.2 -69.5 139.5 -13.0 -2.6 -13.1 80 80 A K - 0 0 182 -2,-0.3 -1,-0.1 -3,-0.0 -3,-0.0 0.965 36.9-165.2 -61.2 -52.3 -14.8 -1.9 -9.8 81 81 A K - 0 0 92 -3,-0.1 2,-0.2 2,-0.0 0, 0.0 0.496 14.3-114.9 71.1 143.4 -11.5 -2.3 -7.8 82 82 A R S S+ 0 0 165 2,-0.1 2,-2.9 1,-0.1 0, 0.0 -0.499 92.4 23.0 -95.4 173.8 -11.0 -2.7 -4.1 83 83 A K S S+ 0 0 175 -2,-0.2 2,-2.1 1,-0.1 -1,-0.1 -0.375 76.3 173.2 61.0 -59.7 -9.3 -0.3 -1.6 84 84 A R + 0 0 158 -2,-2.9 2,-2.1 1,-0.2 -1,-0.1 -0.414 64.5 59.7 72.4 -74.0 -10.2 2.5 -4.2 85 85 A E 0 0 187 -2,-2.1 -1,-0.2 0, 0.0 -2,-0.1 -0.456 360.0 360.0 -81.4 64.6 -9.1 5.5 -2.1 86 86 A K 0 0 229 -2,-2.1 -3,-0.0 0, 0.0 -2,-0.0 -0.307 360.0 360.0 -60.0 360.0 -5.5 4.2 -1.8