==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATOR/DNA 23-JUN-11 2LEV . COMPND 2 MOLECULE: LER; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR T.N.CORDEIRO,H.SCHIMDT,C.MADRID,A.JUAREZ,P.BERNADO,C.GRISIEN . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4697.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 50.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 12.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -9 A S 0 0 148 0, 0.0 2,-1.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.5 -39.0 15.5 1.1 2 -8 A H + 0 0 200 1,-0.1 2,-1.1 2,-0.0 0, 0.0 -0.617 360.0 174.3 -83.0 84.1 -36.1 13.2 0.2 3 -7 A H + 0 0 155 -2,-1.7 2,-0.3 3,-0.0 3,-0.1 -0.725 32.6 105.7 -97.0 87.9 -37.9 9.9 0.2 4 -6 A H S S- 0 0 174 -2,-1.1 -2,-0.0 1,-0.1 0, 0.0 -0.947 77.0-109.5-153.0 168.1 -35.4 7.4 -1.0 5 -5 A H > + 0 0 175 -2,-0.3 3,-0.7 1,-0.1 4,-0.3 0.960 37.2 178.7 -66.2 -54.6 -33.1 4.6 0.2 6 -4 A H T 3 - 0 0 103 1,-0.2 -1,-0.1 2,-0.1 -3,-0.0 0.285 41.7-124.2 68.6 -10.9 -29.9 6.6 -0.4 7 -3 A H T 3 S+ 0 0 68 1,-0.1 -1,-0.2 42,-0.1 43,-0.1 0.746 85.5 104.3 43.9 33.3 -28.0 3.5 1.0 8 -2 A S < + 0 0 50 -3,-0.7 3,-0.3 43,-0.1 -1,-0.1 0.873 43.4 158.0-101.3 -62.2 -26.5 5.8 3.6 9 -1 A M - 0 0 87 -4,-0.3 2,-0.9 1,-0.2 -4,-0.0 0.183 59.7 -69.8 55.4 176.9 -28.2 5.1 7.0 10 0 A G S S+ 0 0 79 2,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.701 82.9 126.9-104.1 81.4 -26.6 5.9 10.4 11 1 A N + 0 0 48 -2,-0.9 3,-0.0 -3,-0.3 0, 0.0 -0.999 3.9 130.1-139.8 138.6 -23.8 3.4 10.7 12 2 A S + 0 0 99 -2,-0.4 2,-1.7 4,-0.0 4,-0.3 0.375 64.0 72.8-151.4 -39.8 -20.1 3.7 11.4 13 3 A S S S+ 0 0 124 2,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.369 95.5 60.2 -85.9 59.1 -19.2 1.3 14.2 14 4 A K S S- 0 0 122 -2,-1.7 2,-2.4 -3,-0.0 -3,-0.0 -0.906 110.1 -50.2-162.9-177.2 -19.5 -1.7 12.0 15 5 A G + 0 0 37 -2,-0.3 38,-0.7 2,-0.0 2,-0.4 -0.469 67.7 172.7 -70.4 76.6 -18.1 -3.3 8.9 16 6 A V E +A 52 0A 43 -2,-2.4 2,-0.3 -4,-0.3 36,-0.2 -0.750 6.3 151.2 -90.4 133.0 -18.5 -0.2 6.7 17 7 A Y E -A 51 0A 56 34,-1.8 34,-1.6 -2,-0.4 2,-0.4 -0.981 42.7-113.2-156.0 164.8 -17.0 -0.3 3.2 18 8 A Y E -AB 50 26A 21 8,-2.1 8,-1.6 -2,-0.3 2,-0.4 -0.890 29.6-171.8-104.6 133.3 -17.3 1.0 -0.3 19 9 A R E - B 0 25A 83 30,-2.7 6,-0.2 -2,-0.4 2,-0.2 -0.984 3.8-179.1-131.7 126.5 -18.3 -1.4 -3.1 20 10 A N > - 0 0 17 4,-1.3 3,-2.5 -2,-0.4 16,-0.0 -0.515 50.3 -82.6-111.7-179.1 -18.3 -0.7 -6.9 21 11 A E T 3 S+ 0 0 151 1,-0.3 -1,-0.0 -2,-0.2 -2,-0.0 0.728 124.1 67.1 -56.9 -24.9 -19.2 -2.8 -10.0 22 12 A E T 3 S- 0 0 101 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.650 108.9-125.3 -70.9 -14.3 -15.7 -4.3 -9.9 23 13 A G < + 0 0 43 -3,-2.5 -2,-0.1 1,-0.3 -1,-0.1 0.228 66.4 136.4 87.9 -14.3 -16.7 -6.0 -6.7 24 14 A Q - 0 0 101 -5,-0.1 -4,-1.3 1,-0.0 2,-0.3 -0.314 40.9-150.6 -66.0 149.2 -13.7 -4.5 -4.9 25 15 A T E -B 19 0A 77 -6,-0.2 2,-0.4 -3,-0.1 -6,-0.2 -0.938 7.8-153.6-127.9 146.6 -14.3 -3.0 -1.4 26 16 A W E -B 18 0A 25 -8,-1.6 -8,-2.1 -2,-0.3 6,-0.1 -0.971 14.8-143.3-119.5 132.8 -12.6 -0.2 0.5 27 17 A S - 0 0 86 -2,-0.4 -11,-0.2 -10,-0.2 3,-0.1 0.739 37.0-125.8 -65.4 -25.1 -12.5 -0.1 4.3 28 18 A G S S+ 0 0 36 1,-0.4 2,-0.3 3,-0.2 -1,-0.1 0.317 77.8 100.3 95.9 -9.1 -12.9 3.7 4.3 29 19 A V S S+ 0 0 118 2,-0.1 2,-0.8 0, 0.0 -1,-0.4 -0.707 80.2 1.9-107.9 158.8 -9.9 4.2 6.4 30 20 A G S S- 0 0 79 -2,-0.3 2,-0.3 -3,-0.1 0, 0.0 -0.557 121.1 -16.0 73.9-109.0 -6.4 5.2 5.4 31 21 A R - 0 0 179 -2,-0.8 -3,-0.2 0, 0.0 -4,-0.2 -0.957 68.0-115.0-133.3 150.2 -6.4 5.7 1.6 32 22 A Q - 0 0 73 -2,-0.3 2,-0.0 1,-0.1 -6,-0.0 -0.437 34.8-104.8 -83.1 155.5 -8.9 4.7 -1.1 33 23 A P >> - 0 0 24 0, 0.0 3,-1.4 0, 0.0 4,-1.0 -0.301 35.6-100.4 -73.8 166.7 -8.1 2.3 -3.9 34 24 A R H 3> S+ 0 0 145 1,-0.3 4,-1.4 2,-0.2 3,-0.1 0.805 121.8 58.0 -58.5 -31.1 -7.5 3.4 -7.5 35 25 A W H 3> S+ 0 0 8 1,-0.2 4,-2.9 2,-0.2 -1,-0.3 0.748 95.3 64.8 -73.7 -21.4 -11.1 2.4 -8.5 36 26 A L H <> S+ 0 0 0 -3,-1.4 4,-2.2 2,-0.2 -1,-0.2 0.936 103.1 47.1 -65.0 -44.2 -12.5 4.8 -5.9 37 27 A K H X S+ 0 0 121 -4,-1.0 4,-2.1 2,-0.2 -1,-0.2 0.907 113.9 48.0 -62.2 -42.4 -11.0 7.8 -7.8 38 28 A E H X S+ 0 0 81 -4,-1.4 4,-0.8 1,-0.2 -2,-0.2 0.911 112.0 48.4 -65.7 -44.6 -12.4 6.4 -11.0 39 29 A A H <>S+ 0 0 6 -4,-2.9 5,-1.0 1,-0.2 -1,-0.2 0.850 110.2 54.1 -64.7 -33.8 -15.8 5.8 -9.6 40 30 A L H ><5S+ 0 0 81 -4,-2.2 3,-1.0 1,-0.2 4,-0.3 0.927 112.6 40.5 -66.8 -46.9 -15.8 9.3 -8.2 41 31 A L H 3<5S+ 0 0 116 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.556 96.1 83.7 -79.1 -7.2 -15.0 11.0 -11.5 42 32 A N T 3<5S- 0 0 117 -4,-0.8 -1,-0.2 2,-0.2 -2,-0.2 0.621 121.1 -93.3 -70.3 -11.8 -17.4 8.6 -13.2 43 33 A G T < 5S+ 0 0 72 -3,-1.0 2,-0.4 1,-0.4 -2,-0.1 0.541 96.2 96.1 110.4 11.9 -20.2 11.0 -12.1 44 34 A M S - 0 0 125 -2,-0.4 3,-1.6 1,-0.1 4,-0.3 -0.451 26.9-120.4 -73.3 149.7 -20.3 10.2 -5.2 46 36 A K G > S+ 0 0 65 1,-0.3 3,-1.6 2,-0.2 -27,-0.2 0.821 113.8 64.4 -59.6 -29.9 -18.5 7.5 -3.3 47 37 A E G > S+ 0 0 80 1,-0.3 3,-1.6 2,-0.2 -1,-0.3 0.764 86.5 72.4 -63.9 -26.3 -21.4 7.5 -0.8 48 38 A D G < S+ 0 0 76 -3,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.630 106.9 35.0 -66.2 -15.4 -23.6 6.3 -3.7 49 39 A F G < S+ 0 0 22 -3,-1.6 -30,-2.7 -4,-0.3 2,-0.9 -0.060 84.2 133.4-128.6 32.8 -21.9 2.9 -3.4 50 40 A L E < +A 18 0A 20 -3,-1.6 2,-0.4 -32,-0.2 -32,-0.2 -0.755 30.1 178.3 -89.1 105.9 -21.4 2.8 0.3 51 41 A V E -A 17 0A 14 -34,-1.6 -34,-1.8 -2,-0.9 2,-0.2 -0.903 8.1-161.3-113.2 135.2 -22.5 -0.6 1.7 52 42 A K E -A 16 0A 3 2,-0.7 -36,-0.2 -2,-0.4 -37,-0.0 -0.541 40.3 -94.5-107.7 173.8 -22.2 -1.6 5.3 53 43 A D S S+ 0 0 66 -38,-0.7 3,-0.4 -2,-0.2 2,-0.3 0.815 117.0 54.6 -54.6 -32.4 -22.2 -5.0 7.1 54 44 A T S S+ 0 0 60 1,-0.2 -2,-0.7 -39,-0.1 3,-0.1 -0.745 111.5 21.6-102.3 152.8 -25.9 -4.3 7.6 55 45 A E S S+ 0 0 76 -2,-0.3 -1,-0.2 1,-0.2 2,-0.1 0.755 92.1 158.4 60.6 28.8 -28.3 -3.5 4.7 56 46 A E 0 0 97 -3,-0.4 -1,-0.2 -5,-0.1 -3,-0.1 -0.455 360.0 360.0 -84.5 152.5 -25.7 -5.3 2.5 57 47 A E 0 0 213 -2,-0.1 -1,-0.1 -3,-0.1 -3,-0.0 -0.775 360.0 360.0 -98.8 360.0 -26.5 -6.8 -0.9