==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-JAN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 24-JUN-11 2LEX . COMPND 2 MOLECULE: PROBABLE WRKY TRANSCRIPTION FACTOR 4; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR K.YAMASAKI,T.KIGAWA,S.WATANABE,M.INOUE,S.YOKOYAMA . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4839.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 41.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 17.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 407 A L 0 0 159 0, 0.0 2,-0.2 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 105.6 3.7 10.5 1.4 2 408 A L - 0 0 167 1,-0.1 2,-1.1 2,-0.0 3,-0.1 -0.425 360.0-139.0 -63.4 124.5 7.4 11.3 0.7 3 409 A D + 0 0 92 -2,-0.2 -1,-0.1 1,-0.2 4,-0.1 -0.725 37.8 157.6 -90.7 94.8 7.9 12.4 -2.9 4 410 A D S S- 0 0 93 -2,-1.1 -1,-0.2 2,-0.1 3,-0.1 0.516 79.8 -60.4 -91.8 -7.8 11.1 10.7 -4.0 5 411 A G S S+ 0 0 4 1,-0.4 2,-0.2 58,-0.4 58,-0.1 0.629 108.0 57.7 125.5 64.3 10.1 10.9 -7.6 6 412 A Y S S- 0 0 23 57,-0.7 2,-0.5 55,-0.1 -1,-0.4 -0.894 75.9 -96.0 166.8 168.2 6.9 9.0 -8.5 7 413 A R + 0 0 150 22,-0.3 22,-1.2 -2,-0.2 2,-0.4 -0.941 39.1 178.9-113.5 121.1 3.2 8.7 -7.7 8 414 A W E -A 28 0A 29 -2,-0.5 2,-0.6 20,-0.2 20,-0.2 -0.958 18.7-154.3-125.4 141.8 2.1 6.1 -5.2 9 415 A R E -A 27 0A 154 18,-1.9 18,-1.3 -2,-0.4 -2,-0.0 -0.912 24.6-129.9-116.7 104.7 -1.4 5.2 -3.8 10 416 A K E +A 26 0A 83 -2,-0.6 2,-0.3 16,-0.2 16,-0.2 -0.103 32.5 178.6 -48.9 145.9 -1.3 3.6 -0.4 11 417 A Y E +A 25 0A 67 14,-1.1 14,-1.2 1,-0.1 -1,-0.0 -0.910 35.0 1.2-159.9 128.9 -3.4 0.4 -0.2 12 418 A G E - 0 0 43 -2,-0.3 13,-0.2 12,-0.1 2,-0.2 -0.069 51.3-138.2 86.1 171.0 -4.1 -2.1 2.5 13 419 A Q E + 0 0 139 11,-0.1 2,-0.3 2,-0.0 11,-0.2 -0.595 28.4 156.7-173.2 103.8 -3.1 -2.4 6.2 14 420 A K E -A 23 0A 140 9,-1.2 9,-3.6 -2,-0.2 2,-0.3 -0.945 30.6-130.0-133.9 154.8 -2.0 -5.6 8.0 15 421 A V E -A 22 0A 86 -2,-0.3 2,-0.4 7,-0.3 -2,-0.0 -0.823 17.5-157.2-107.0 144.3 0.1 -6.4 11.0 16 422 A V E > > -A 21 0A 39 5,-1.9 5,-1.3 -2,-0.3 3,-0.5 -0.955 10.6-133.4-123.5 141.3 2.9 -9.0 11.2 17 423 A K T 3 5S+ 0 0 180 -2,-0.4 4,-0.1 1,-0.2 -1,-0.0 -0.126 88.7 44.3 -79.2 179.1 4.4 -10.9 14.2 18 424 A G T 3 5S+ 0 0 69 1,-0.1 -1,-0.2 2,-0.1 25,-0.1 0.369 125.7 44.3 65.3 -10.9 8.1 -11.2 14.9 19 425 A N T < 5S- 0 0 56 -3,-0.5 2,-0.7 2,-0.1 -3,-0.3 -0.271 91.7-146.0-157.4 52.0 8.1 -7.5 14.0 20 426 A P T 5 + 0 0 96 0, 0.0 -3,-0.2 0, 0.0 -2,-0.1 0.130 60.2 110.7 -26.7 70.5 5.0 -6.1 15.9 21 427 A Y E - B 0 33A 36 3,-1.2 3,-3.3 -2,-0.3 2,-2.1 -0.879 58.4 -84.6-175.8 143.1 0.5 6.1 -14.4 31 437 A P T 3 S- 0 0 143 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.281 125.5 -0.5 -55.8 80.4 -1.2 6.3 -17.8 32 438 A G T 3 S+ 0 0 64 -2,-2.1 2,-0.3 1,-0.4 26,-0.0 0.413 122.7 86.7 115.4 2.1 0.2 3.0 -19.0 33 439 A C E < +B 30 0A 15 -3,-3.3 -3,-1.2 24,-0.1 -1,-0.4 -0.970 40.1 171.6-135.7 151.6 2.3 2.1 -16.0 34 440 A G E +B 29 0A 63 22,-0.4 2,-0.3 -2,-0.3 22,-0.2 -0.704 9.3 165.8-162.0 103.2 1.7 0.3 -12.7 35 441 A V E -B 28 0A 4 -7,-0.7 -7,-3.4 -2,-0.2 2,-0.3 -0.851 23.8-136.4-119.0 155.1 4.3 -0.8 -10.2 36 442 A R E -BC 27 54A 121 18,-1.8 18,-2.6 -2,-0.3 2,-0.4 -0.856 15.0-171.3-113.9 148.7 4.1 -1.9 -6.6 37 443 A K E -BC 26 53A 23 -11,-4.1 -11,-3.3 -2,-0.3 2,-0.4 -1.000 8.5-151.6-139.2 137.2 6.2 -0.9 -3.6 38 444 A H E -BC 25 52A 26 14,-2.0 14,-1.8 -2,-0.4 2,-0.4 -0.868 5.2-163.4-112.1 144.3 6.3 -2.3 -0.0 39 445 A V E +BC 24 51A 16 -15,-2.0 -15,-1.4 -2,-0.4 2,-0.3 -0.979 14.8 166.7-130.6 121.4 7.2 -0.5 3.2 40 446 A E E - C 0 50A 42 10,-1.5 10,-3.5 -2,-0.4 2,-0.2 -0.951 23.3-135.6-132.6 152.2 8.1 -2.2 6.5 41 447 A R E - C 0 49A 82 -2,-0.3 2,-0.6 8,-0.2 8,-0.2 -0.613 24.6-109.0-103.4 165.1 9.6 -1.0 9.7 42 448 A A E > - C 0 45A 28 6,-1.5 3,-3.1 3,-1.2 6,-0.3 -0.850 15.4-144.5 -99.5 119.5 12.4 -2.7 11.8 43 449 A A T 3 S+ 0 0 34 -2,-0.6 -1,-0.2 1,-0.3 -24,-0.1 0.885 105.5 42.4 -43.7 -50.9 11.2 -4.1 15.2 44 450 A T T 3 S+ 0 0 144 1,-0.2 -1,-0.3 -3,-0.1 -25,-0.0 0.126 126.7 35.6 -86.3 22.0 14.5 -3.1 16.8 45 451 A D E X -C 42 0A 50 -3,-3.1 3,-1.6 3,-0.1 -3,-1.2 -0.368 56.7-178.0-174.2 84.4 14.3 0.3 15.1 46 452 A P E 3 S+ 0 0 81 0, 0.0 -3,-0.1 0, 0.0 -2,-0.1 0.668 90.0 58.9 -61.8 -16.4 11.0 2.0 14.5 47 453 A K E 3 S+ 0 0 170 -5,-0.1 2,-0.6 -6,-0.1 -2,-0.0 0.658 88.7 85.4 -87.0 -17.6 13.0 4.8 12.7 48 454 A A E < - 0 0 35 -3,-1.6 -6,-1.5 -6,-0.3 2,-0.4 -0.762 62.1-171.4 -90.1 121.8 14.4 2.3 10.1 49 455 A V E -C 41 0A 70 -2,-0.6 2,-0.4 -8,-0.2 -8,-0.2 -0.895 11.0-147.1-115.8 144.1 12.1 1.7 7.1 50 456 A V E -C 40 0A 67 -10,-3.5 -10,-1.5 -2,-0.4 2,-0.4 -0.855 9.6-164.0-109.6 143.1 12.5 -0.8 4.3 51 457 A T E -C 39 0A 74 -2,-0.4 2,-0.5 -12,-0.2 -12,-0.2 -0.979 4.2-172.8-132.5 123.9 11.4 -0.3 0.7 52 458 A T E -C 38 0A 66 -14,-1.8 -14,-2.0 -2,-0.4 2,-0.5 -0.957 9.2-155.5-118.1 127.2 11.0 -3.0 -1.9 53 459 A Y E -C 37 0A 112 -2,-0.5 2,-0.6 -16,-0.2 -16,-0.2 -0.886 8.7-172.8-105.0 123.7 10.3 -2.2 -5.6 54 460 A E E +C 36 0A 106 -18,-2.6 -18,-1.8 -2,-0.5 2,-0.3 -0.927 54.9 0.5-119.4 109.0 8.5 -4.8 -7.7 55 461 A G S S- 0 0 58 -2,-0.6 2,-0.3 -20,-0.2 -20,-0.1 -0.905 81.2 -80.1 123.9-151.9 8.2 -4.1 -11.4 56 462 A K - 0 0 185 -2,-0.3 2,-0.5 -22,-0.2 -22,-0.4 -0.986 25.3-124.6-157.4 148.9 9.3 -1.3 -13.7 57 463 A H - 0 0 45 -2,-0.3 3,-0.2 -24,-0.1 2,-0.1 -0.852 13.0-170.6-102.4 130.1 8.2 2.2 -14.7 58 464 A N S S+ 0 0 107 -2,-0.5 -1,-0.1 1,-0.2 3,-0.0 -0.399 72.8 69.1-113.0 53.8 7.6 3.1 -18.4 59 465 A H S S- 0 0 53 -2,-0.1 -1,-0.2 1,-0.1 -26,-0.1 -0.100 100.8-102.9-163.0 47.8 7.1 6.8 -18.1 60 466 A D - 0 0 141 -3,-0.2 -1,-0.1 1,-0.1 -2,-0.1 0.407 55.8 -60.4 44.1 168.1 10.5 8.3 -17.1 61 467 A L - 0 0 103 -55,-0.1 -55,-0.1 -3,-0.0 -1,-0.1 -0.720 61.1-157.2 -84.3 109.1 11.3 9.4 -13.6 62 468 A P 0 0 56 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.064 360.0 360.0 -72.4-171.7 8.9 12.2 -12.5 63 469 A A 0 0 103 -58,-0.1 -57,-0.7 0, 0.0 -58,-0.4 -0.513 360.0 360.0 -81.4 360.0 9.3 14.9 -9.9