==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 28-JUN-93 1LFB . COMPND 2 MOLECULE: LIVER TRANSCRIPTION FACTOR (LFB1); . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR T.A.CESKA,M.LAMERS,P.MONACI,A.NICOSIA,R.CORTESE,D.SUCK . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5581.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 74.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 48.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A R 0 0 250 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.1 8.4 18.1 23.8 2 14 A F - 0 0 25 53,-0.1 2,-0.4 2,-0.0 53,-0.1 0.053 360.0-164.3 132.6 120.8 8.9 21.8 24.9 3 15 A K - 0 0 138 -2,-0.1 2,-0.3 0, 0.0 54,-0.0 -0.984 21.6-117.0-136.7 154.7 6.0 24.1 24.6 4 16 A W - 0 0 35 -2,-0.4 -2,-0.0 4,-0.0 51,-0.0 -0.607 31.8-137.3 -75.2 138.5 5.4 27.8 24.7 5 17 A G > - 0 0 9 -2,-0.3 4,-2.8 1,-0.1 3,-0.2 -0.786 19.8-118.0 -95.5 149.4 3.3 28.9 27.5 6 18 A P H > S+ 0 0 106 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.797 119.4 59.8 -48.7 -30.7 0.5 31.5 27.0 7 19 A A H > S+ 0 0 15 2,-0.2 4,-1.1 1,-0.2 5,-0.1 0.962 108.7 40.1 -66.1 -49.0 2.7 33.5 29.4 8 20 A S H > S+ 0 0 1 1,-0.2 4,-2.4 -3,-0.2 -1,-0.2 0.873 112.1 59.5 -69.9 -29.4 5.7 33.4 27.1 9 21 A Q H X S+ 0 0 67 -4,-2.8 4,-3.1 1,-0.2 5,-0.3 0.913 102.0 48.6 -71.3 -38.8 3.5 34.0 24.0 10 22 A Q H X S+ 0 0 130 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.836 111.9 52.2 -69.7 -24.3 2.0 37.3 25.0 11 23 A I H X S+ 0 0 40 -4,-1.1 4,-1.1 2,-0.2 -2,-0.2 0.969 114.7 43.2 -63.3 -50.5 5.5 38.5 25.8 12 24 A L H >X S+ 0 0 0 -4,-2.4 4,-1.8 2,-0.2 3,-0.6 0.908 114.3 45.9 -66.7 -50.3 6.6 37.4 22.4 13 25 A F H 3X S+ 0 0 94 -4,-3.1 4,-1.3 1,-0.2 -1,-0.2 0.950 107.9 59.3 -59.6 -45.3 3.6 38.7 20.3 14 26 A Q H 3< S+ 0 0 138 -4,-1.9 -1,-0.2 -5,-0.3 -2,-0.2 0.834 110.4 45.6 -44.2 -37.0 3.8 42.1 22.3 15 27 A A H XX S+ 0 0 25 -4,-1.1 4,-2.2 -3,-0.6 3,-2.0 0.935 100.1 62.7 -78.5 -48.6 7.4 42.3 20.9 16 28 A Y H 3< S+ 0 0 36 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.786 97.9 59.8 -52.5 -35.2 6.9 41.3 17.2 17 29 A E T 3< S+ 0 0 147 -4,-1.3 -1,-0.3 1,-0.2 -2,-0.1 0.246 110.2 39.2 -85.1 12.6 4.7 44.4 16.6 18 30 A R T <4 S+ 0 0 212 -3,-2.0 2,-0.3 1,-0.2 -2,-0.2 0.490 141.2 2.1-115.7 -34.8 7.3 46.9 17.5 19 31 A Q < - 0 0 79 -4,-2.2 -1,-0.2 1,-0.1 -2,-0.1 -0.906 51.6-176.5-155.4 115.1 9.9 44.8 15.8 20 32 A K S S+ 0 0 89 -2,-0.3 50,-0.1 1,-0.2 -4,-0.1 0.494 86.6 55.9 -90.5 5.2 9.6 41.5 13.8 21 33 A N S S- 0 0 97 -5,-0.1 -1,-0.2 49,-0.0 42,-0.0 -0.624 79.4-167.0-130.8 63.5 13.4 41.1 13.2 22 34 A P - 0 0 14 0, 0.0 -6,-0.0 0, 0.0 -2,-0.0 -0.297 18.1-125.3 -62.8 142.4 14.8 41.2 16.8 23 35 A S > - 0 0 42 1,-0.1 4,-2.5 4,-0.0 5,-0.2 -0.161 31.3 -90.1 -75.3-174.7 18.6 41.7 16.9 24 36 A K H > S+ 0 0 135 1,-0.2 4,-1.9 2,-0.2 -1,-0.1 0.976 129.2 40.7 -58.4 -55.6 21.1 39.4 18.7 25 37 A E H > S+ 0 0 136 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.853 113.3 53.1 -64.7 -40.2 20.9 41.3 21.9 26 38 A E H >> S+ 0 0 87 2,-0.2 4,-2.2 1,-0.2 3,-1.0 0.969 105.7 55.2 -62.8 -44.3 17.1 41.8 21.7 27 39 A R H 3X S+ 0 0 15 -4,-2.5 4,-1.5 1,-0.3 -2,-0.2 0.926 105.1 51.9 -53.6 -49.9 16.5 38.1 21.3 28 40 A E H 3X S+ 0 0 102 -4,-1.9 4,-1.5 1,-0.2 -1,-0.3 0.771 107.2 53.5 -60.9 -28.9 18.5 37.4 24.5 29 41 A T H X S+ 0 0 18 -4,-1.5 4,-2.6 -5,-0.2 3,-0.9 0.972 108.1 45.2 -71.1 -51.8 14.7 34.9 26.5 32 44 A E H 3X S+ 0 0 92 -4,-1.5 4,-2.4 -3,-0.3 5,-0.3 0.983 114.8 50.3 -47.5 -62.4 15.1 36.3 30.1 33 45 A E H 3X S+ 0 0 73 -4,-2.1 4,-0.8 1,-0.2 -1,-0.3 0.652 111.6 47.9 -53.4 -20.4 11.6 37.7 29.9 34 46 A C H X S+ 0 0 25 -4,-2.2 4,-1.4 2,-0.2 3,-1.1 0.941 110.8 50.4 -73.1 -41.4 7.1 31.3 32.8 39 51 A C H ><>S+ 0 0 0 -4,-2.9 5,-1.3 1,-0.3 3,-1.3 0.978 105.4 54.9 -56.6 -56.8 8.7 30.7 36.3 40 52 A I T 3<5S+ 0 0 90 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.517 107.3 52.2 -66.0 1.3 6.4 33.1 38.2 41 53 A Q T <45S+ 0 0 146 -3,-1.1 -1,-0.3 -5,-0.3 -2,-0.2 0.773 106.6 52.8 -96.1 -36.1 3.4 31.1 36.7 42 54 A R T <<5S- 0 0 136 -4,-1.4 -2,-0.2 -3,-1.3 -3,-0.1 0.340 114.8-112.8 -81.5 11.2 4.8 27.8 38.0 43 55 A G T 5S+ 0 0 76 -4,-0.4 2,-0.3 1,-0.3 -3,-0.2 0.934 79.0 134.4 55.5 38.3 5.2 29.1 41.6 44 56 A V < - 0 0 36 -5,-1.3 -1,-0.3 -8,-0.1 -2,-0.1 -0.859 63.6-109.1-116.3 148.3 8.8 28.7 40.8 45 57 A S > - 0 0 63 -2,-0.3 3,-1.0 1,-0.1 6,-0.2 -0.696 20.8-126.4 -81.3 137.1 11.3 31.4 41.8 46 58 A P T 3 S+ 0 0 58 0, 0.0 3,-0.4 0, 0.0 -1,-0.1 0.810 110.2 60.8 -39.2 -40.7 12.8 33.4 38.8 47 59 A S T 3 S+ 0 0 109 1,-0.3 2,-1.4 2,-0.1 3,-0.3 0.877 97.8 58.1 -67.8 -30.1 16.3 32.5 40.1 48 60 A Q X + 0 0 101 -3,-1.0 3,-1.4 1,-0.2 4,-0.3 -0.429 64.5 147.2 -96.4 68.6 15.6 28.8 39.7 49 61 A A T 3 + 0 0 30 -2,-1.4 3,-0.5 -3,-0.4 -1,-0.2 0.617 66.1 65.6 -73.2 -15.4 14.9 29.3 36.0 50 62 A Q T > S+ 0 0 127 -3,-0.3 3,-0.9 1,-0.2 -1,-0.3 0.527 78.2 84.1 -82.2 -7.3 16.3 25.8 35.5 51 63 A G T < S+ 0 0 27 -3,-1.4 -1,-0.2 -6,-0.2 -2,-0.2 0.894 77.5 70.6 -58.5 -39.1 13.3 24.5 37.5 52 64 A L T > S- 0 0 5 -3,-0.5 3,-1.1 -4,-0.3 -1,-0.2 0.710 81.8-172.2 -44.8 -37.9 11.3 24.6 34.1 53 65 A G G X + 0 0 39 -3,-0.9 3,-0.8 1,-0.3 -1,-0.2 -0.399 65.3 3.0 73.1-145.9 13.3 21.7 32.7 54 66 A S G 3 S+ 0 0 50 1,-0.3 2,-0.7 -2,-0.1 -1,-0.3 0.792 124.1 70.2 -42.7 -32.4 12.7 20.9 29.0 55 67 A N G < + 0 0 55 -3,-1.1 2,-0.6 -53,-0.1 -1,-0.3 0.102 69.2 129.4 -80.6 33.9 10.3 23.9 28.8 56 68 A L < - 0 0 68 -3,-0.8 2,-1.1 -2,-0.7 -6,-0.1 -0.755 63.9-124.0 -92.7 119.0 13.3 26.3 29.1 57 69 A V - 0 0 3 -2,-0.6 -22,-0.2 -26,-0.2 2,-0.2 -0.442 26.8-164.6 -73.3 99.9 13.3 29.0 26.4 58 70 A T >> - 0 0 48 -2,-1.1 4,-1.0 1,-0.1 3,-0.7 -0.528 31.5-115.2 -70.1 150.1 16.6 28.7 24.7 59 71 A E H 3> S+ 0 0 55 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.772 113.9 66.4 -65.8 -17.1 17.4 31.7 22.5 60 72 A V H 3> S+ 0 0 85 1,-0.2 4,-3.0 2,-0.2 -1,-0.2 0.943 99.8 51.2 -65.8 -35.5 17.3 29.5 19.3 61 73 A R H <> S+ 0 0 91 -3,-0.7 4,-2.5 1,-0.2 -1,-0.2 0.842 108.9 49.3 -72.3 -28.0 13.6 29.0 20.0 62 74 A V H X S+ 0 0 0 -4,-1.0 4,-1.9 2,-0.2 -1,-0.2 0.935 112.0 50.2 -73.1 -42.5 13.0 32.7 20.3 63 75 A Y H X S+ 0 0 106 -4,-2.3 4,-2.7 2,-0.2 3,-0.4 0.973 112.3 45.6 -57.0 -60.9 14.9 33.2 17.0 64 76 A N H X S+ 0 0 88 -4,-3.0 4,-3.3 1,-0.2 5,-0.4 0.899 107.2 58.6 -53.7 -44.6 12.8 30.5 15.2 65 77 A W H X S+ 0 0 5 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.926 111.7 42.0 -51.2 -45.1 9.5 31.9 16.6 66 78 A F H X S+ 0 0 2 -4,-1.9 4,-2.4 -3,-0.4 3,-0.4 0.991 115.6 49.2 -69.1 -49.6 10.3 35.2 14.9 67 79 A A H X S+ 0 0 29 -4,-2.7 4,-1.9 1,-0.3 3,-0.2 0.924 116.3 42.2 -46.4 -51.2 11.6 33.6 11.8 68 80 A N H X S+ 0 0 59 -4,-3.3 4,-1.5 1,-0.3 -1,-0.3 0.768 110.1 55.0 -73.9 -31.4 8.5 31.4 11.5 69 81 A R H < S+ 0 0 65 -4,-2.1 4,-0.4 -3,-0.4 -1,-0.3 0.838 107.8 52.0 -74.3 -30.9 6.0 34.1 12.4 70 82 A R H >X S+ 0 0 64 -4,-2.4 3,-1.5 -5,-0.2 4,-1.2 0.901 102.7 59.1 -69.4 -38.2 7.5 36.1 9.5 71 83 A K H >< S+ 0 0 134 -4,-1.9 3,-1.3 1,-0.3 -2,-0.2 0.942 97.7 61.5 -48.6 -47.4 7.0 33.1 7.2 72 84 A E T 3< S+ 0 0 105 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.638 101.0 50.3 -67.3 -14.8 3.3 33.3 8.0 73 85 A E T <4 S+ 0 0 96 -3,-1.5 2,-2.3 -4,-0.4 -1,-0.3 0.704 91.6 85.1 -84.6 -23.8 3.1 36.9 6.5 74 86 A A S << S+ 0 0 77 -3,-1.3 -1,-0.1 -4,-1.2 2,-0.1 -0.479 77.1 134.1 -74.4 80.5 4.9 35.4 3.4 75 87 A F - 0 0 143 -2,-2.3 -2,-0.1 1,-0.2 2,-0.1 -0.177 57.5-112.3-116.3-157.1 1.7 34.3 1.9 76 88 A R 0 0 191 -2,-0.1 -1,-0.2 1,-0.0 0, 0.0 0.148 360.0 360.0-105.5-140.3 -0.8 34.0 -1.1 77 89 A H 0 0 214 -2,-0.1 -1,-0.0 0, 0.0 0, 0.0 -0.362 360.0 360.0 70.2 360.0 -4.1 35.7 -1.4