==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PEPTIDE 24-JUN-98 1LFC . COMPND 2 MOLECULE: LACTOFERRICIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR P.M.HWANG,N.ZHOU,X.SHAN,C.H.ARROWSMITH,H.J.VOGEL . 25 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2837.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 52.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 24.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 150 0, 0.0 2,-0.5 0, 0.0 24,-0.2 0.000 360.0 360.0 360.0 129.0 -11.8 1.2 -0.1 2 2 A K B -A 24 0A 146 22,-1.1 22,-0.5 18,-0.0 0, 0.0 -0.848 360.0-168.6-131.0 100.1 -10.3 -2.0 1.3 3 3 A a - 0 0 15 -2,-0.5 20,-0.1 20,-0.2 17,-0.1 0.260 9.8-153.6 -66.4-158.2 -7.1 -3.3 -0.5 4 4 A R S S+ 0 0 159 18,-0.1 2,-0.2 19,-0.0 -1,-0.1 0.430 74.1 25.1-153.1 -31.8 -5.7 -6.8 0.2 5 5 A R - 0 0 170 17,-0.1 2,-1.0 2,-0.0 16,-0.1 -0.587 59.7-161.5-146.6 84.4 -1.9 -6.9 -0.4 6 6 A W - 0 0 124 -2,-0.2 2,-0.8 14,-0.1 14,-0.2 -0.470 16.9-159.6 -66.1 100.9 0.1 -3.7 -0.2 7 7 A Q E -B 19 0B 134 -2,-1.0 12,-1.1 12,-0.7 2,-0.4 -0.730 22.2-120.6 -88.0 112.4 3.2 -4.7 -2.1 8 8 A W E -B 18 0B 154 -2,-0.8 10,-0.4 10,-0.3 3,-0.1 -0.263 37.2-159.9 -51.0 104.9 6.1 -2.4 -1.1 9 9 A R E -B 17 0B 155 8,-3.7 8,-2.6 -2,-0.4 2,-0.2 -0.137 28.2 -78.3 -79.1-177.2 7.0 -0.9 -4.5 10 10 A M + 0 0 180 6,-0.2 2,-0.2 7,-0.1 -1,-0.1 -0.498 61.1 146.0 -82.9 154.9 10.3 0.7 -5.3 11 11 A K - 0 0 113 1,-0.5 4,-0.2 -2,-0.2 3,-0.1 -0.757 48.3 -24.3-159.1-154.7 11.1 4.3 -4.2 12 12 A K S > S- 0 0 160 -2,-0.2 3,-0.9 1,-0.2 -1,-0.5 0.310 96.3 -46.5 -52.6-164.7 14.0 6.5 -3.0 13 13 A L T 3 S- 0 0 157 1,-0.3 -1,-0.2 -3,-0.1 -3,-0.0 -0.488 124.5 -8.3 -72.7 137.0 17.1 5.0 -1.4 14 14 A G T 3 S+ 0 0 90 -2,-0.2 -1,-0.3 -3,-0.1 -2,-0.1 0.904 115.0 102.6 44.6 46.7 16.5 2.3 1.3 15 15 A A < - 0 0 38 -3,-0.9 -1,-0.1 -4,-0.2 -3,-0.1 -0.625 51.3-168.6-162.4 98.3 12.7 3.2 1.2 16 16 A P - 0 0 66 0, 0.0 2,-0.4 0, 0.0 -6,-0.2 -0.127 19.3-130.2 -76.3 178.0 10.1 1.1 -0.6 17 17 A S E -B 9 0B 36 -8,-2.6 -8,-3.7 -10,-0.1 2,-0.7 -0.814 11.0-154.7-136.9 97.6 6.5 2.2 -1.3 18 18 A I E +B 8 0B 61 -2,-0.4 -10,-0.3 -10,-0.4 2,-0.2 -0.577 25.0 176.0 -74.0 113.9 3.7 -0.1 -0.3 19 19 A T E -B 7 0B 52 -12,-1.1 -12,-0.7 -2,-0.7 2,-0.6 -0.629 40.6 -82.7-111.7 173.7 0.7 0.7 -2.5 20 20 A a + 0 0 33 -2,-0.2 -14,-0.1 -14,-0.2 3,-0.1 -0.647 40.2 177.1 -79.6 118.6 -2.7 -0.9 -2.9 21 21 A V + 0 0 58 -2,-0.6 2,-0.3 -16,-0.1 -1,-0.1 0.054 66.0 49.4-108.6 26.8 -2.5 -3.9 -5.2 22 22 A R - 0 0 117 2,-0.1 2,-0.3 -18,-0.0 -18,-0.1 -0.919 60.3-154.7-162.3 132.9 -6.2 -4.9 -4.8 23 23 A R + 0 0 191 -2,-0.3 2,-0.5 -20,-0.1 -20,-0.2 -0.340 33.0 162.1-106.7 54.1 -9.5 -3.0 -5.1 24 24 A A B A 2 0A 34 -22,-0.5 -22,-1.1 -2,-0.3 -2,-0.1 -0.598 360.0 360.0 -75.9 120.0 -11.6 -5.2 -2.8 25 25 A F 0 0 244 -2,-0.5 -1,-0.1 -24,-0.2 -2,-0.0 -0.160 360.0 360.0 -41.7 360.0 -14.7 -3.3 -1.7