==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-JAN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 18-JAN-10 3LFO . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; . AUTHOR C.H.CHAN,K.B.WONG . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5651.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 10.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 32.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 229 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.4 -5.7 -7.6 17.3 2 1 A V - 0 0 40 1,-0.1 2,-1.1 94,-0.1 3,-0.1 -0.548 360.0-128.8 -70.7 131.3 -2.3 -6.9 15.7 3 2 A D > - 0 0 95 -2,-0.2 4,-3.2 1,-0.2 5,-0.3 -0.742 27.0-166.2 -86.2 96.5 -0.5 -4.1 17.6 4 3 A F H > S+ 0 0 25 -2,-1.1 4,-2.8 1,-0.2 5,-0.3 0.916 78.7 46.8 -61.0 -53.6 0.3 -2.0 14.6 5 4 A A H > S+ 0 0 42 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.909 117.4 44.6 -54.4 -47.6 2.9 0.4 16.1 6 5 A F H > S+ 0 0 102 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.953 116.1 44.4 -60.8 -52.1 4.8 -2.4 17.8 7 6 A E H X S+ 0 0 30 -4,-3.2 4,-2.7 1,-0.2 87,-0.3 0.861 112.6 52.3 -68.5 -34.4 4.8 -4.8 14.8 8 7 A L H X S+ 0 0 2 -4,-2.8 4,-2.5 -5,-0.3 -1,-0.2 0.963 113.2 42.5 -64.3 -53.3 5.7 -2.1 12.4 9 8 A R H X S+ 0 0 151 -4,-2.0 4,-2.3 -5,-0.3 -2,-0.2 0.858 112.6 54.8 -56.0 -39.5 8.7 -1.0 14.5 10 9 A K H X S+ 0 0 71 -4,-2.2 4,-1.6 2,-0.2 81,-0.3 0.921 109.1 48.1 -66.1 -37.8 9.7 -4.7 15.1 11 10 A A H X S+ 0 0 0 -4,-2.7 4,-2.5 1,-0.2 -2,-0.2 0.916 112.2 49.6 -65.2 -43.0 9.7 -5.2 11.2 12 11 A Q H < S+ 0 0 57 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.916 117.5 40.3 -58.8 -44.3 11.8 -2.1 10.9 13 12 A D H < S+ 0 0 125 -4,-2.3 -2,-0.2 1,-0.1 -1,-0.2 0.628 132.1 22.0 -80.2 -21.0 14.2 -3.4 13.6 14 13 A T H < S+ 0 0 71 -4,-1.6 -3,-0.2 -5,-0.1 -2,-0.2 0.542 126.7 25.0-126.5 -10.5 14.3 -7.0 12.6 15 14 A G S < S- 0 0 24 -4,-2.5 2,-0.4 -5,-0.2 -4,-0.0 -0.187 88.3 -80.1-130.1-145.6 13.3 -7.2 8.9 16 15 A K E +A 88 0A 107 72,-2.5 71,-2.1 -2,-0.1 72,-2.0 -0.951 36.2 175.1-137.2 122.2 13.3 -4.9 5.9 17 16 A I E -A 86 0A 24 -2,-0.4 2,-0.5 69,-0.2 69,-0.2 -0.915 17.4-150.8-119.9 146.4 10.8 -2.2 5.1 18 17 A V E -A 85 0A 16 67,-2.5 67,-2.5 -2,-0.4 2,-0.3 -0.981 21.3-138.6-117.5 124.3 11.1 0.2 2.1 19 18 A M E +A 84 0A 37 -2,-0.5 4,-0.3 65,-0.2 65,-0.2 -0.689 48.9 32.3 -96.2 143.5 9.6 3.6 2.7 20 19 A G S > S- 0 0 20 63,-2.9 4,-2.1 -2,-0.3 5,-0.1 0.028 79.7 -84.6 109.3 160.5 7.5 5.8 0.4 21 20 A A H > S+ 0 0 12 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.882 122.5 52.0 -58.1 -46.3 5.0 5.7 -2.5 22 21 A R H > S+ 0 0 108 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.950 113.8 42.8 -64.0 -46.4 7.6 5.3 -5.2 23 22 A K H > S+ 0 0 22 -4,-0.3 4,-2.8 2,-0.2 -1,-0.2 0.863 112.1 54.6 -65.9 -39.4 9.3 2.4 -3.5 24 23 A S H X S+ 0 0 0 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.957 110.9 45.3 -58.3 -45.8 5.9 0.8 -2.6 25 24 A I H X S+ 0 0 28 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.920 113.4 51.2 -63.2 -44.7 4.9 0.9 -6.3 26 25 A Q H X S+ 0 0 107 -4,-2.5 4,-2.0 1,-0.2 6,-0.2 0.930 112.2 44.3 -62.4 -44.9 8.3 -0.4 -7.4 27 26 A Y H <>S+ 0 0 54 -4,-2.8 6,-2.0 2,-0.2 5,-1.7 0.788 111.5 53.9 -70.9 -29.5 8.2 -3.3 -5.0 28 27 A A H ><5S+ 0 0 2 -4,-1.9 3,-1.4 -5,-0.2 -2,-0.2 0.952 108.2 51.6 -63.5 -47.4 4.6 -4.1 -5.9 29 28 A K H 3<5S+ 0 0 119 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.1 0.876 116.1 37.0 -58.3 -46.6 5.5 -4.3 -9.5 30 29 A M T 3<5S- 0 0 111 -4,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 0.319 111.9-116.6 -91.5 6.9 8.4 -6.7 -9.2 31 30 A G T < 5S+ 0 0 49 -3,-1.4 -3,-0.2 -4,-0.2 -4,-0.1 0.668 78.9 123.7 74.3 19.3 6.7 -8.7 -6.5 32 31 A G < + 0 0 17 -5,-1.7 2,-0.3 -6,-0.2 -4,-0.2 0.728 51.0 87.5 -86.7 -22.8 9.2 -8.0 -3.8 33 32 A A - 0 0 5 -6,-2.0 54,-0.2 1,-0.1 3,-0.1 -0.590 51.1-173.9 -76.9 139.5 6.7 -6.6 -1.4 34 33 A K S S+ 0 0 103 52,-3.2 2,-0.3 1,-0.4 53,-0.1 0.660 78.8 3.1 -93.0 -27.5 4.8 -9.0 0.9 35 34 A L E -B 86 0A 0 51,-0.7 51,-3.1 24,-0.1 2,-0.4 -0.938 65.1-147.9-157.8 139.4 2.5 -6.3 2.2 36 35 A I E -Bc 85 61A 0 24,-2.4 26,-2.7 -2,-0.3 2,-0.4 -0.977 9.2-161.4-111.8 135.6 1.9 -2.6 1.5 37 36 A I E -Bc 84 62A 0 47,-2.7 47,-2.3 -2,-0.4 2,-0.4 -0.954 11.2-170.8-114.1 127.0 0.8 -0.2 4.2 38 37 A V E -Bc 83 63A 0 24,-2.3 26,-2.0 -2,-0.4 45,-0.3 -0.991 25.7-118.0-121.1 138.3 -0.7 3.1 3.0 39 38 A A E > - c 0 64A 0 43,-3.2 3,-2.3 -2,-0.4 28,-0.2 -0.442 27.3-123.2 -68.0 139.7 -1.6 6.2 5.1 40 39 A R T 3 S+ 0 0 113 24,-1.7 27,-0.2 26,-1.4 -1,-0.1 0.845 113.3 46.2 -53.6 -30.8 -5.4 6.9 4.9 41 40 A N T 3 S+ 0 0 72 25,-0.6 -1,-0.3 2,-0.0 26,-0.1 0.101 75.3 144.4-105.0 23.4 -4.5 10.3 3.6 42 41 A A S < S- 0 0 4 -3,-2.3 5,-0.1 40,-0.2 -4,-0.0 -0.338 75.1 -81.2 -50.1 142.4 -1.8 9.3 1.0 43 42 A R > - 0 0 139 1,-0.1 4,-2.9 3,-0.1 3,-0.3 -0.264 46.8-120.6 -62.4 132.7 -2.4 11.8 -1.8 44 43 A P H > S+ 0 0 102 0, 0.0 4,-2.0 0, 0.0 -1,-0.1 0.775 108.7 47.8 -52.6 -40.0 -5.3 10.4 -3.8 45 44 A D H > S+ 0 0 90 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.910 116.7 44.4 -63.2 -45.3 -3.6 10.1 -7.2 46 45 A I H > S+ 0 0 39 -3,-0.3 4,-2.6 1,-0.2 5,-0.2 0.940 112.1 52.7 -63.1 -48.2 -0.6 8.3 -5.5 47 46 A K H X S+ 0 0 30 -4,-2.9 4,-3.0 1,-0.2 5,-0.2 0.913 107.0 52.5 -53.6 -45.2 -2.9 6.1 -3.4 48 47 A E H X S+ 0 0 53 -4,-2.0 4,-2.6 -5,-0.2 -1,-0.2 0.915 110.7 47.2 -60.6 -44.6 -4.8 5.0 -6.5 49 48 A D H X S+ 0 0 79 -4,-1.8 4,-2.5 2,-0.2 5,-0.3 0.898 112.4 49.7 -64.0 -42.6 -1.6 4.0 -8.2 50 49 A I H X S+ 0 0 1 -4,-2.6 4,-2.5 2,-0.2 5,-0.2 0.952 112.7 46.8 -61.3 -49.3 -0.3 2.1 -5.1 51 50 A E H X S+ 0 0 81 -4,-3.0 4,-2.5 -5,-0.2 -2,-0.2 0.915 113.4 49.6 -61.9 -39.8 -3.6 0.3 -4.8 52 51 A Y H X S+ 0 0 118 -4,-2.6 4,-3.3 -5,-0.2 -2,-0.2 0.965 112.0 45.6 -61.0 -54.6 -3.6 -0.6 -8.5 53 52 A Y H X S+ 0 0 61 -4,-2.5 4,-1.9 1,-0.2 6,-0.2 0.884 113.8 50.7 -61.6 -38.1 -0.0 -1.9 -8.6 54 53 A A H X>S+ 0 0 1 -4,-2.5 5,-2.5 -5,-0.3 4,-0.9 0.946 112.9 44.7 -62.4 -48.2 -0.7 -3.9 -5.5 55 54 A R H ><5S+ 0 0 218 -4,-2.5 3,-1.0 2,-0.2 -2,-0.2 0.926 109.6 57.0 -60.9 -43.8 -3.9 -5.4 -6.9 56 55 A L H 3<5S+ 0 0 103 -4,-3.3 -1,-0.2 1,-0.3 -2,-0.2 0.918 116.2 36.1 -49.5 -46.7 -2.1 -6.1 -10.2 57 56 A S H 3<5S- 0 0 50 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.420 111.8-115.9 -91.8 -3.4 0.5 -8.2 -8.3 58 57 A G T <<5 + 0 0 65 -3,-1.0 -3,-0.2 -4,-0.9 -4,-0.1 0.672 62.5 151.0 71.4 24.2 -1.9 -9.7 -5.7 59 58 A I < - 0 0 16 -5,-2.5 -1,-0.3 -6,-0.2 -24,-0.1 -0.735 47.4-119.4 -87.4 125.4 -0.1 -7.9 -2.8 60 59 A P - 0 0 42 0, 0.0 -24,-2.4 0, 0.0 2,-0.5 -0.370 23.6-150.8 -63.2 142.8 -2.3 -7.2 0.2 61 60 A V E -c 36 0A 53 -26,-0.2 2,-0.5 37,-0.1 -24,-0.2 -0.966 6.7-164.5-113.7 132.9 -2.8 -3.5 1.2 62 61 A Y E -c 37 0A 61 -26,-2.7 -24,-2.3 -2,-0.5 2,-0.8 -0.976 14.8-140.5-114.2 126.0 -3.4 -2.4 4.7 63 62 A E E -c 38 0A 75 -2,-0.5 2,-0.3 -26,-0.2 -24,-0.2 -0.802 14.1-139.0 -90.4 106.8 -4.7 1.2 5.2 64 63 A F E -c 39 0A 18 -26,-2.0 2,-2.0 -2,-0.8 -24,-1.7 -0.534 12.5-134.6 -62.5 125.7 -3.1 2.7 8.3 65 64 A E S S+ 0 0 134 -2,-0.3 2,-0.3 -26,-0.1 -1,-0.1 -0.557 79.9 70.2 -84.6 67.3 -5.9 4.7 10.2 66 65 A G S S- 0 0 0 -2,-2.0 -26,-1.4 3,-0.0 -25,-0.6 -0.949 87.1 -86.4-174.1 165.2 -3.6 7.6 10.6 67 66 A T > - 0 0 29 -2,-0.3 4,-2.6 -28,-0.2 5,-0.2 -0.376 36.9-108.8 -86.5 166.5 -2.0 10.4 8.6 68 67 A S H > S+ 0 0 18 2,-0.2 13,-2.3 1,-0.2 4,-2.0 0.750 122.1 56.9 -64.5 -27.7 1.2 10.3 6.7 69 68 A V H > S+ 0 0 85 11,-0.2 4,-2.4 2,-0.2 5,-0.2 0.966 110.3 44.3 -64.0 -52.0 2.6 12.6 9.4 70 69 A E H > S+ 0 0 96 1,-0.2 4,-2.7 2,-0.2 -2,-0.2 0.883 113.1 51.0 -58.9 -38.6 1.7 10.0 12.1 71 70 A L H X S+ 0 0 0 -4,-2.6 4,-1.6 2,-0.2 -1,-0.2 0.918 110.7 47.3 -69.7 -43.8 3.0 7.1 10.0 72 71 A G H <>S+ 0 0 0 -4,-2.0 5,-2.8 9,-0.2 4,-0.2 0.925 113.2 50.2 -63.6 -39.7 6.4 8.8 9.4 73 72 A T H ><5S+ 0 0 100 -4,-2.4 3,-1.9 1,-0.3 -2,-0.2 0.950 107.2 53.7 -67.3 -41.9 6.6 9.6 13.2 74 73 A L H 3<5S+ 0 0 63 -4,-2.7 -1,-0.3 1,-0.3 -2,-0.2 0.831 107.8 50.4 -53.8 -43.0 5.8 6.1 14.0 75 74 A L T 3<5S- 0 0 4 -4,-1.6 -1,-0.3 -3,-0.2 -2,-0.2 0.338 119.2-112.5 -80.3 6.4 8.8 5.0 11.8 76 75 A G T < 5S+ 0 0 65 -3,-1.9 -3,-0.2 1,-0.3 -2,-0.1 0.680 70.0 143.3 73.9 20.7 11.0 7.4 13.6 77 76 A R < - 0 0 102 -5,-2.8 -1,-0.3 2,-0.2 -2,-0.1 -0.740 55.3-141.5 -98.2 143.3 11.4 9.6 10.5 78 77 A P S S+ 0 0 127 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.308 87.1 59.1 -78.0 5.9 11.6 13.4 10.4 79 78 A H S S- 0 0 87 -7,-0.1 -2,-0.2 -11,-0.1 2,-0.1 -0.836 96.5 -87.6-128.4 165.4 9.4 13.4 7.2 80 79 A T - 0 0 81 -2,-0.3 2,-0.4 -8,-0.1 -11,-0.2 -0.409 31.4-156.7 -66.3 148.2 5.9 12.1 6.2 81 80 A V - 0 0 4 -13,-2.3 -9,-0.2 1,-0.1 -10,-0.2 -0.963 11.5-178.6-130.0 112.1 5.7 8.5 5.0 82 81 A S - 0 0 25 -2,-0.4 -43,-3.2 1,-0.3 2,-0.3 0.722 68.5 -10.4 -85.4 -20.8 2.6 8.0 2.8 83 82 A A E - B 0 38A 0 -45,-0.3 -63,-2.9 -15,-0.1 2,-0.3 -0.962 60.3-167.0-163.5 164.7 3.1 4.3 2.2 84 83 A L E -AB 19 37A 0 -47,-2.3 -47,-2.7 -2,-0.3 2,-0.4 -0.976 16.5-129.3-155.3 162.2 5.7 1.6 2.7 85 84 A A E -AB 18 36A 0 -67,-2.5 -67,-2.5 -2,-0.3 2,-0.9 -0.968 13.9-137.3-114.3 134.8 6.4 -2.0 1.6 86 85 A V E +AB 17 35A 0 -51,-3.1 -52,-3.2 -2,-0.4 -51,-0.7 -0.769 28.6 168.4 -86.0 109.7 7.2 -4.9 3.8 87 86 A V E S+ 0 0 23 -71,-2.1 -70,-0.2 -2,-0.9 -1,-0.2 0.871 76.3 7.1 -88.5 -38.6 10.0 -6.7 2.1 88 87 A D E -A 16 0A 79 -72,-2.0 -72,-2.5 -3,-0.2 -1,-0.4 -0.966 61.5-155.6-144.5 122.7 10.8 -8.9 5.1 89 88 A P > - 0 0 27 0, 0.0 3,-2.0 0, 0.0 5,-0.3 0.589 27.6-165.1 -72.2 -7.5 8.7 -9.0 8.2 90 89 A G T 3 - 0 0 31 1,-0.3 -75,-0.2 -76,-0.1 -79,-0.1 -0.406 65.9 -24.8 57.7-126.6 11.7 -10.2 10.3 91 90 A A T 3 S+ 0 0 64 -81,-0.3 -1,-0.3 -2,-0.1 -80,-0.1 0.434 115.0 108.0 -90.8 -4.6 10.5 -11.5 13.6 92 91 A S S < S- 0 0 16 -3,-2.0 3,-0.3 -85,-0.1 -85,-0.1 -0.216 70.8-135.5 -79.2 167.8 7.3 -9.4 13.5 93 92 A A > + 0 0 46 1,-0.2 3,-1.1 -90,-0.1 4,-0.3 -0.025 67.6 122.2 -99.9 23.9 3.6 -10.3 13.0 94 93 A I G > + 0 0 0 -87,-0.3 3,-1.7 -5,-0.3 4,-0.2 0.821 63.0 63.3 -58.8 -35.4 3.2 -7.4 10.5 95 94 A L G > S+ 0 0 66 1,-0.3 3,-2.4 -3,-0.3 -1,-0.2 0.767 84.6 75.7 -66.8 -23.4 2.1 -9.6 7.6 96 95 A A G X S+ 0 0 57 -3,-1.1 3,-1.9 1,-0.3 -1,-0.3 0.771 77.8 74.6 -61.4 -23.9 -1.0 -10.7 9.5 97 96 A L G < S+ 0 0 30 -3,-1.7 -1,-0.3 -4,-0.3 -2,-0.2 0.703 85.6 68.6 -53.1 -21.2 -2.4 -7.2 8.7 98 97 A G G < S- 0 0 23 -3,-2.4 3,-0.3 1,-0.3 -1,-0.3 0.439 107.8-116.8 -81.6 -5.7 -2.9 -8.6 5.2 99 98 A G < - 0 0 47 -3,-1.9 -1,-0.3 1,-0.2 -2,-0.0 -0.275 38.9 -64.5 94.1-176.1 -5.6 -11.2 6.2 100 99 A K 0 0 200 1,-0.2 -1,-0.2 -3,-0.1 -4,-0.0 0.420 360.0 360.0 -95.1 0.1 -5.6 -15.0 6.0 101 100 A E 0 0 233 -3,-0.3 -1,-0.2 0, 0.0 -2,-0.1 0.715 360.0 360.0-113.2 360.0 -5.3 -15.4 2.3