==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-SEP-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE/DNA BINDING PROTEIN 28-JUL-11 2LGK . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE UHRF1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.WANG,J.SHEN,Z.YANG,P.CHEN,B.ZHAO,W.HU,W.LAN,X.TONG,H.WU,G. . 81 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6604.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 27.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 311 A S 0 0 157 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 138.0 -11.5 7.3 11.9 2 312 A G - 0 0 30 1,-0.1 73,-0.1 2,-0.0 4,-0.1 -0.868 360.0 -79.6-128.3 163.5 -11.7 8.4 8.2 3 313 A P - 0 0 28 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 -0.187 38.7-118.3 -58.2 148.6 -10.7 6.9 4.9 4 314 A S S S+ 0 0 60 1,-0.2 2,-0.6 2,-0.1 5,-0.0 0.838 107.5 47.8 -60.6 -28.8 -7.0 7.1 3.9 5 315 A C + 0 0 7 1,-0.1 -1,-0.2 14,-0.1 7,-0.1 -0.927 56.4 164.1-117.2 113.9 -8.1 9.1 0.8 6 316 A K S S+ 0 0 151 -2,-0.6 4,-0.1 2,-0.1 -1,-0.1 0.484 77.6 53.5-103.7 -4.9 -10.5 12.0 1.5 7 317 A H S S+ 0 0 159 1,-0.1 3,-0.2 2,-0.1 4,-0.2 0.788 119.9 28.2 -98.3 -33.5 -9.9 13.7 -1.9 8 318 A C S S+ 0 0 15 1,-0.1 6,-0.2 2,-0.1 -2,-0.1 0.153 84.6 113.1-112.4 18.8 -10.6 10.8 -4.3 9 319 A K S > S+ 0 0 118 1,-0.2 3,-1.5 2,-0.2 4,-0.2 0.949 83.0 45.8 -56.3 -46.3 -13.0 8.9 -2.0 10 320 A D T 3 S+ 0 0 139 1,-0.3 3,-0.4 -3,-0.2 -1,-0.2 0.895 119.8 41.2 -64.1 -36.6 -15.8 9.6 -4.5 11 321 A D T > S+ 0 0 67 1,-0.2 3,-1.9 -4,-0.2 -1,-0.3 0.027 75.3 126.2 -98.7 28.4 -13.5 8.6 -7.3 12 322 A V T < + 0 0 54 -3,-1.5 -1,-0.2 1,-0.3 4,-0.1 0.868 69.1 63.8 -54.5 -31.8 -12.1 5.6 -5.3 13 323 A N T 3 S+ 0 0 117 -3,-0.4 -1,-0.3 -4,-0.2 2,-0.1 0.849 96.7 70.1 -62.1 -30.0 -13.1 3.5 -8.3 14 324 A R S < S- 0 0 156 -3,-1.9 2,-0.4 -6,-0.2 -6,-0.0 -0.447 98.7-102.3 -84.0 162.0 -10.5 5.6 -10.3 15 325 A L + 0 0 106 -2,-0.1 2,-0.4 5,-0.0 5,-0.1 -0.710 44.3 177.4 -87.1 130.0 -6.8 5.2 -9.8 16 326 A C - 0 0 23 -2,-0.4 3,-0.4 3,-0.4 -8,-0.0 -0.987 34.9-132.9-134.3 142.6 -5.2 8.0 -7.7 17 327 A R S > S+ 0 0 232 -2,-0.4 3,-1.0 1,-0.2 -1,-0.1 0.854 102.2 66.0 -62.8 -35.1 -1.6 8.5 -6.5 18 328 A V T 3 S+ 0 0 97 1,-0.3 2,-0.3 4,-0.0 -1,-0.2 0.930 118.7 23.2 -56.4 -41.3 -2.7 9.4 -2.9 19 329 A C T 3 S+ 0 0 11 -3,-0.4 -3,-0.4 2,-0.1 -1,-0.3 -0.560 113.2 75.7-124.0 70.4 -4.0 5.8 -2.5 20 330 A A S < S- 0 0 10 -3,-1.0 22,-0.4 -2,-0.3 6,-0.1 -0.959 92.2 -58.3-161.2 175.0 -2.1 3.7 -5.0 21 331 A C - 0 0 5 5,-0.6 22,-0.1 -2,-0.3 -2,-0.1 -0.396 45.8-132.9 -65.2 137.7 1.3 2.1 -5.6 22 332 A H S S+ 0 0 104 20,-0.3 -1,-0.1 2,-0.1 21,-0.1 0.906 96.5 26.4 -60.4 -43.2 4.0 4.7 -5.6 23 333 A L S S+ 0 0 115 19,-0.2 20,-0.0 3,-0.1 -1,-0.0 0.926 140.2 12.0 -87.3 -78.1 5.7 3.5 -8.8 24 334 A C S S- 0 0 69 1,-0.1 -2,-0.1 2,-0.1 3,-0.1 0.918 82.4-148.0 -69.5 -40.3 3.3 1.6 -11.1 25 335 A G + 0 0 8 1,-0.2 -9,-0.1 -8,-0.0 -1,-0.1 0.646 50.3 135.3 82.5 12.0 0.2 2.8 -9.2 26 336 A G - 0 0 27 -6,-0.1 -5,-0.6 -11,-0.1 -1,-0.2 -0.293 56.2-136.5 -85.9 177.0 -1.6 -0.5 -10.1 27 337 A R + 0 0 60 1,-0.1 4,-0.1 -7,-0.1 -1,-0.1 -0.287 46.4 143.8-129.3 49.0 -3.6 -2.7 -7.7 28 338 A Q S S- 0 0 143 1,-0.2 -1,-0.1 2,-0.1 19,-0.0 0.860 93.6 -16.0 -57.8 -32.5 -2.5 -6.2 -8.5 29 339 A D > + 0 0 52 -3,-0.1 3,-1.7 2,-0.0 -1,-0.2 -0.207 66.6 171.9-172.8 68.9 -2.8 -7.1 -4.8 30 340 A P G > S+ 0 0 38 0, 0.0 3,-1.6 0, 0.0 44,-0.2 0.790 79.8 67.6 -56.2 -28.6 -3.0 -4.0 -2.5 31 341 A D G 3 S+ 0 0 94 1,-0.3 -2,-0.0 -4,-0.1 -4,-0.0 0.841 106.0 41.6 -64.2 -28.0 -3.8 -6.4 0.4 32 342 A K G < S+ 0 0 120 -3,-1.7 2,-0.5 2,-0.1 -1,-0.3 0.290 92.7 110.9 -99.5 9.9 -0.2 -7.7 0.1 33 343 A Q < - 0 0 12 -3,-1.6 2,-0.3 -4,-0.2 11,-0.1 -0.736 56.0-154.4 -88.2 124.3 1.2 -4.2 -0.4 34 344 A L - 0 0 10 -2,-0.5 9,-1.6 9,-0.3 2,-0.4 -0.741 2.4-151.3 -98.6 146.1 3.3 -2.9 2.5 35 345 A M E -A 42 0A 32 37,-0.6 37,-0.5 -2,-0.3 2,-0.4 -0.919 18.2-120.9-116.7 140.9 3.8 0.8 3.2 36 346 A C E >> -A 41 0A 0 5,-2.6 4,-2.6 -2,-0.4 5,-0.6 -0.651 14.8-153.8 -81.1 127.1 6.8 2.3 4.9 37 347 A D T 45S+ 0 0 22 24,-0.8 -1,-0.2 -2,-0.4 25,-0.1 0.919 94.1 48.3 -67.5 -43.2 5.9 4.2 8.1 38 348 A E T 45S+ 0 0 123 1,-0.2 -1,-0.2 3,-0.1 24,-0.1 0.901 128.5 25.3 -66.7 -37.8 8.8 6.6 8.0 39 349 A C T 45S- 0 0 47 2,-0.1 -2,-0.2 0, 0.0 -1,-0.2 0.683 94.7-143.4 -98.2 -20.0 8.2 7.5 4.4 40 350 A D T <5 + 0 0 88 -4,-2.6 2,-0.3 1,-0.2 -3,-0.2 0.941 57.0 122.9 58.7 47.2 4.4 6.6 4.4 41 351 A M E < -A 36 0A 73 -5,-0.6 -5,-2.6 -20,-0.0 -1,-0.2 -0.960 63.4-112.0-137.5 156.4 4.6 5.2 0.9 42 352 A A E -A 35 0A 5 -22,-0.4 -20,-0.3 -2,-0.3 2,-0.3 -0.574 31.0-151.6 -85.9 150.2 3.7 1.9 -0.8 43 353 A F > - 0 0 48 -9,-1.6 3,-0.9 -2,-0.2 -9,-0.3 -0.855 27.6-113.8-122.7 158.3 6.5 -0.3 -2.3 44 354 A H T 3> S+ 0 0 48 -2,-0.3 4,-2.1 1,-0.3 3,-0.3 0.432 80.3 118.0 -68.6 5.2 6.7 -2.8 -5.1 45 355 A I T 34 S+ 0 0 28 1,-0.3 -1,-0.3 -11,-0.2 7,-0.2 0.824 90.2 30.1 -44.0 -28.5 7.3 -5.5 -2.5 46 356 A Y T <4 S+ 0 0 20 -3,-0.9 -1,-0.3 -12,-0.1 -2,-0.2 0.658 109.2 68.2-105.0 -20.8 4.0 -7.0 -3.8 47 357 A C T 4 S+ 0 0 16 -4,-0.3 -2,-0.2 -3,-0.3 2,-0.1 0.812 83.2 90.4 -69.1 -26.7 4.2 -5.8 -7.4 48 358 A L S < S- 0 0 99 -4,-2.1 0, 0.0 2,-0.1 0, 0.0 -0.436 87.0-123.1 -70.8 143.1 7.1 -8.1 -8.1 49 359 A D S S+ 0 0 160 -2,-0.1 -1,-0.1 2,-0.1 0, 0.0 0.963 96.3 74.8 -49.2 -62.2 6.2 -11.6 -9.3 50 360 A P S S- 0 0 99 0, 0.0 -2,-0.1 0, 0.0 2,-0.1 -0.366 79.2-151.5 -57.6 110.4 7.9 -13.4 -6.4 51 361 A P - 0 0 97 0, 0.0 2,-0.2 0, 0.0 -5,-0.1 -0.370 21.7 -97.5 -81.7 162.1 5.7 -12.9 -3.3 52 362 A L - 0 0 92 -7,-0.2 3,-0.1 1,-0.1 -7,-0.0 -0.568 21.9-136.4 -80.4 142.5 6.9 -12.9 0.3 53 363 A S S S+ 0 0 133 -2,-0.2 2,-0.3 1,-0.2 -1,-0.1 0.891 88.6 9.7 -66.8 -35.9 6.6 -16.1 2.2 54 364 A S - 0 0 99 -3,-0.0 -1,-0.2 2,-0.0 0, 0.0 -1.000 68.4-141.6-144.6 145.2 5.3 -14.3 5.3 55 365 A V - 0 0 75 -2,-0.3 2,-0.3 -3,-0.1 -23,-0.0 -0.920 22.3-130.3-109.6 125.7 4.2 -10.7 6.0 56 366 A P + 0 0 56 0, 0.0 5,-0.2 0, 0.0 -2,-0.0 -0.550 31.0 168.4 -74.9 129.5 5.2 -9.1 9.3 57 367 A S S S+ 0 0 99 -2,-0.3 4,-0.1 3,-0.1 0, 0.0 0.801 76.8 40.9-107.2 -49.8 2.2 -7.4 11.2 58 368 A E S S+ 0 0 194 1,-0.1 2,-0.7 2,-0.1 0, 0.0 0.899 110.7 64.6 -68.0 -37.5 3.5 -6.6 14.7 59 369 A D S S- 0 0 114 1,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.757 90.7-130.1 -89.9 115.6 6.9 -5.5 13.3 60 370 A E - 0 0 83 -2,-0.7 2,-0.4 11,-0.1 -3,-0.1 -0.320 21.7-129.6 -61.0 143.4 6.5 -2.4 11.2 61 371 A W - 0 0 28 -26,-0.3 -24,-0.8 -5,-0.2 2,-0.4 -0.806 20.1-159.6 -99.3 136.3 8.3 -2.8 7.8 62 372 A Y - 0 0 70 -2,-0.4 -26,-0.1 -26,-0.2 5,-0.1 -0.896 23.4-109.7-115.2 143.7 10.7 -0.0 6.6 63 373 A C >> - 0 0 0 -2,-0.4 4,-1.6 1,-0.1 3,-1.1 -0.335 34.6-108.1 -66.5 151.8 11.7 0.6 3.0 64 374 A P H 3> S+ 0 0 70 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.830 119.5 62.8 -50.4 -32.9 15.4 -0.3 2.1 65 375 A E H 34 S+ 0 0 140 2,-0.2 4,-0.1 1,-0.2 -2,-0.0 0.926 102.0 49.7 -61.7 -41.2 16.1 3.5 1.9 66 376 A C H X4 S+ 0 0 21 -3,-1.1 3,-1.3 1,-0.2 -1,-0.2 0.952 114.6 43.5 -62.4 -47.5 15.2 3.9 5.6 67 377 A R H 3< S+ 0 0 144 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.839 111.7 54.3 -68.3 -31.0 17.5 1.0 6.6 68 378 A N T 3< 0 0 124 -4,-2.6 -1,-0.3 -5,-0.3 -2,-0.2 0.409 360.0 360.0 -83.7 6.2 20.2 2.3 4.3 69 379 A D < 0 0 182 -3,-1.3 -3,-0.1 -5,-0.2 -2,-0.0 0.085 360.0 360.0 -69.6 360.0 20.0 5.6 6.1 70 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 71 1 B A 0 0 30 0, 0.0 2,-0.4 0, 0.0 -11,-0.1 0.000 360.0 360.0 360.0 158.3 3.0 -2.7 8.9 72 2 B R - 0 0 92 -37,-0.5 -37,-0.6 -11,-0.1 2,-0.3 -0.950 360.0-171.5-123.4 142.9 0.2 -0.3 7.9 73 3 B T - 0 0 112 -2,-0.4 2,-0.3 -39,-0.1 -42,-0.1 -0.843 31.7 -97.0-126.8 165.3 -2.6 -1.0 5.4 74 4 B K - 0 0 48 -2,-0.3 -55,-0.0 -44,-0.2 0, 0.0 -0.615 24.0-133.6 -83.3 140.7 -5.3 1.3 3.8 75 5 B Q S S+ 0 0 112 -2,-0.3 2,-0.4 -73,-0.1 -1,-0.1 0.882 94.5 63.0 -60.7 -34.8 -8.7 1.2 5.5 76 6 B T + 0 0 76 4,-0.0 2,-0.3 -3,-0.0 -2,-0.1 -0.744 68.2 165.7 -93.3 137.5 -10.3 0.9 2.0 77 7 B A - 0 0 37 -2,-0.4 -2,-0.0 1,-0.1 -4,-0.0 -0.989 49.7-112.7-147.2 155.6 -9.5 -2.3 -0.0 78 8 B R S S+ 0 0 179 -2,-0.3 2,-1.1 1,-0.2 -1,-0.1 0.885 109.9 65.2 -57.6 -34.9 -10.9 -4.0 -3.1 79 9 B X S S+ 0 0 225 -3,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.739 71.6 163.6 -92.1 99.5 -12.0 -6.9 -0.8 80 10 B S - 0 0 106 -2,-1.1 2,-0.3 -4,-0.1 -4,-0.0 -0.922 15.9-167.1-117.9 142.4 -14.7 -5.4 1.5 81 11 B T 0 0 116 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.841 360.0 360.0-123.5 162.5 -17.2 -7.3 3.6 82 12 B G 0 0 148 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.589 360.0 360.0 -71.7 360.0 -20.3 -6.3 5.5