==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 29-JUL-11 2LGN . COMPND 2 MOLECULE: LACTOCOCCIN 972; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. LACTIS; . AUTHOR D.L.TURNER,P.LAMOSA,B.MARTINEZ . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4275.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 71.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 33 50.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 184 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -31.8 14.5 7.5 -2.7 2 2 A G - 0 0 32 17,-0.1 2,-0.5 19,-0.0 17,-0.2 -0.613 360.0 -72.1-146.9-154.3 12.5 4.5 -4.0 3 3 A T E -A 18 0A 70 15,-1.2 15,-2.3 -2,-0.2 2,-0.4 -0.947 40.1-173.9-124.2 110.2 9.7 3.5 -6.3 4 4 A W E +A 17 0A 82 -2,-0.5 2,-0.2 13,-0.2 13,-0.2 -0.849 6.3 176.7-104.5 138.2 6.2 4.3 -5.2 5 5 A Q E +A 16 0A 108 11,-2.0 11,-1.7 -2,-0.4 2,-0.4 -0.708 6.8 172.4-144.0 87.0 3.2 3.0 -7.2 6 6 A H E +A 15 0A 88 -2,-0.2 2,-0.2 9,-0.2 9,-0.2 -0.790 10.8 153.7 -99.3 139.7 -0.2 3.8 -5.7 7 7 A G E -A 14 0A 11 7,-1.5 7,-0.8 -2,-0.4 2,-0.3 -0.816 33.9-133.7-147.6-174.0 -3.4 3.2 -7.6 8 8 A Y E -A 13 0A 70 -2,-0.2 2,-1.1 5,-0.2 5,-0.2 -0.803 1.6-159.7-155.7 108.6 -7.1 2.4 -7.3 9 9 A G - 0 0 39 3,-0.7 4,-0.1 -2,-0.3 47,-0.0 -0.210 53.3-106.9 -83.1 44.9 -8.9 -0.3 -9.2 10 10 A V S S+ 0 0 85 -2,-1.1 46,-0.4 1,-0.2 3,-0.1 0.830 114.7 38.1 27.1 71.1 -12.2 1.5 -8.5 11 11 A S S S+ 0 0 3 1,-0.5 42,-1.0 44,-0.3 43,-0.6 -0.055 118.5 35.6 155.2 -36.7 -13.2 -1.2 -6.0 12 12 A S E - B 0 52A 29 41,-0.3 -3,-0.7 40,-0.2 -1,-0.5 -0.830 68.6-127.3-135.3 172.4 -10.0 -2.0 -4.2 13 13 A A E +AB 8 51A 0 38,-2.4 38,-1.7 -2,-0.3 2,-0.3 -0.988 24.5 175.3-129.2 133.3 -6.8 -0.4 -3.0 14 14 A Y E -AB 7 50A 84 -7,-0.8 -7,-1.5 -2,-0.4 2,-0.3 -0.981 7.5-174.3-136.2 147.5 -3.3 -1.4 -3.7 15 15 A S E -AB 6 49A 0 34,-2.0 34,-2.5 -2,-0.3 2,-0.5 -0.920 0.5-175.2-148.4 117.0 0.1 0.1 -2.9 16 16 A N E +AB 5 48A 31 -11,-1.7 -11,-2.0 -2,-0.3 2,-0.4 -0.953 7.2 173.8-117.1 125.7 3.5 -1.1 -4.1 17 17 A Y E -AB 4 47A 20 30,-2.0 30,-2.0 -2,-0.5 2,-0.3 -0.994 12.9-157.4-133.6 126.6 6.7 0.5 -2.8 18 18 A H E +AB 3 46A 58 -15,-2.3 -15,-1.2 -2,-0.4 2,-0.3 -0.715 14.1 171.8-103.0 154.3 10.2 -0.7 -3.5 19 19 A H E + B 0 45A 5 26,-1.0 25,-3.7 -2,-0.3 26,-0.9 -0.894 19.5 175.1-163.6 129.6 13.3 -0.0 -1.5 20 20 A G S S+ 0 0 60 -2,-0.3 23,-0.1 23,-0.3 3,-0.1 -0.164 78.8 56.1-128.7 37.7 16.9 -1.3 -1.6 21 21 A S S S- 0 0 77 1,-0.6 2,-0.3 21,-0.1 22,-0.2 0.571 112.7 -1.8-130.9 -50.5 18.5 0.9 1.0 22 22 A K S S- 0 0 86 20,-0.1 -1,-0.6 1,-0.1 22,-0.3 -0.935 89.3 -67.4-144.5 164.4 16.6 0.4 4.2 23 23 A T - 0 0 36 -2,-0.3 43,-2.1 20,-0.2 2,-0.3 -0.065 53.0-174.8 -50.2 153.2 13.6 -1.4 5.6 24 24 A H E -CD 41 65B 1 17,-1.9 17,-2.4 41,-0.3 2,-0.3 -0.985 14.1-164.7-152.7 155.2 10.2 -0.3 4.2 25 25 A S E -CD 40 64B 14 39,-1.1 39,-0.7 -2,-0.3 2,-0.5 -0.990 8.3-152.6-147.6 135.7 6.5 -1.0 4.8 26 26 A A E -CD 39 63B 0 13,-0.7 13,-1.9 -2,-0.3 2,-0.4 -0.947 15.5-174.5-113.3 121.1 3.4 -0.3 2.8 27 27 A T E +CD 38 62B 37 35,-1.9 35,-3.6 -2,-0.5 2,-0.4 -0.944 4.4 179.3-118.2 136.3 0.1 0.1 4.6 28 28 A V E -CD 37 61B 0 9,-1.3 9,-2.5 -2,-0.4 2,-0.4 -0.990 8.2-163.2-139.2 127.0 -3.3 0.6 3.0 29 29 A V E -CD 36 60B 48 31,-2.6 31,-2.8 -2,-0.4 2,-0.8 -0.907 15.2-138.5-112.6 137.8 -6.6 0.9 4.8 30 30 A N E >> -CD 35 59B 2 5,-2.6 5,-1.9 -2,-0.4 2,-1.4 -0.847 12.4-165.3 -98.4 107.7 -9.9 0.5 3.0 31 31 A N E 45S+ D 0 58B 122 -2,-0.8 27,-0.8 27,-0.8 5,-0.0 -0.672 72.7 59.4 -93.7 80.5 -12.4 3.1 4.2 32 32 A N T 45S+ 0 0 88 -2,-1.4 -1,-0.2 25,-0.1 27,-0.1 0.161 119.1 10.3-162.5 -58.5 -15.6 1.6 3.0 33 33 A T T 45S- 0 0 74 -3,-0.2 -2,-0.1 2,-0.0 19,-0.0 0.533 113.2 -92.2-110.8 -15.7 -16.3 -1.8 4.5 34 34 A G T <5 + 0 0 64 -4,-0.9 2,-0.3 1,-0.1 -3,-0.2 0.853 68.4 156.2 100.9 58.8 -13.5 -1.7 7.1 35 35 A R E < +C 30 0B 142 -5,-1.9 -5,-2.6 16,-0.1 2,-0.3 -0.745 14.4 175.9-113.0 161.2 -10.5 -3.3 5.4 36 36 A Q E +C 29 0B 108 -7,-0.3 2,-0.3 -2,-0.3 -7,-0.2 -0.943 1.5 170.0-164.9 142.2 -6.8 -3.0 6.1 37 37 A G E -C 28 0B 12 -9,-2.5 -9,-1.3 -2,-0.3 2,-0.2 -0.856 6.0-178.1-144.9 178.2 -3.5 -4.5 4.9 38 38 A K E -C 27 0B 122 -2,-0.3 2,-0.4 -11,-0.2 -11,-0.2 -0.812 15.6-157.6 178.7 140.0 0.2 -4.1 5.1 39 39 A D E -C 26 0B 59 -13,-1.9 -13,-0.7 -2,-0.2 2,-0.3 -0.756 19.0-171.3-130.7 84.3 3.3 -5.7 3.6 40 40 A T E +C 25 0B 58 -2,-0.4 2,-0.3 -15,-0.2 -15,-0.2 -0.597 17.0 157.6 -79.3 134.0 6.3 -5.0 5.8 41 41 A Q E -C 24 0B 75 -17,-2.4 -17,-1.9 -2,-0.3 4,-0.1 -0.914 35.3-106.9-148.0 171.7 9.7 -6.1 4.4 42 42 A R - 0 0 182 -2,-0.3 2,-0.3 -19,-0.2 -23,-0.1 -0.125 61.1 -53.1 -90.4-169.9 13.4 -5.4 4.7 43 43 A A S S+ 0 0 44 -22,-0.2 -23,-0.3 1,-0.2 -1,-0.2 -0.517 119.2 32.8 -70.6 128.8 15.7 -3.6 2.4 44 44 A G S S+ 0 0 47 -25,-3.7 2,-0.3 1,-0.3 -24,-0.2 0.932 93.3 95.3 88.2 74.2 15.5 -5.0 -1.1 45 45 A V E S-B 19 0A 48 -26,-0.9 -26,-1.0 -4,-0.1 2,-0.7 -0.946 71.1-104.7-177.9 163.7 12.0 -6.2 -1.8 46 46 A W E -B 18 0A 121 -2,-0.3 2,-1.0 -28,-0.2 -28,-0.2 -0.921 27.0-157.8-108.5 112.8 8.7 -5.2 -3.2 47 47 A A E +B 17 0A 0 -30,-2.0 -30,-2.0 -2,-0.7 2,-0.6 -0.798 17.5 175.6 -93.6 102.2 6.1 -4.3 -0.6 48 48 A K E -B 16 0A 115 -2,-1.0 2,-0.3 -32,-0.2 -32,-0.2 -0.941 5.7-173.1-112.7 117.3 2.7 -4.7 -2.3 49 49 A A E -B 15 0A 0 -34,-2.5 -34,-2.0 -2,-0.6 2,-0.3 -0.820 2.4-176.8-109.6 149.0 -0.4 -4.2 -0.1 50 50 A T E +B 14 0A 94 -2,-0.3 2,-0.3 -36,-0.2 -36,-0.2 -0.994 9.7 156.5-145.7 147.8 -4.0 -4.9 -1.0 51 51 A V E +B 13 0A 12 -38,-1.7 -38,-2.4 -2,-0.3 -14,-0.1 -0.919 45.3 18.3-169.8 143.7 -7.3 -4.4 0.7 52 52 A G E -B 12 0A 20 -2,-0.3 -40,-0.2 -40,-0.2 -39,-0.1 -0.219 44.3-175.8 84.6-178.1 -11.0 -4.0 -0.3 53 53 A R + 0 0 165 -42,-1.0 -41,-0.3 2,-0.2 -1,-0.1 0.162 44.3 88.1 142.5 94.5 -12.6 -4.8 -3.6 54 54 A N S S- 0 0 117 -43,-0.6 2,-0.3 1,-0.1 -42,-0.1 0.052 86.0 -28.6-162.5 -72.6 -16.2 -4.1 -4.5 55 55 A L S S- 0 0 113 -44,-0.5 -44,-0.3 1,-0.1 -2,-0.2 -0.952 90.5 -35.8-156.0 169.1 -17.0 -0.7 -5.9 56 56 A T S S+ 0 0 96 -46,-0.4 2,-0.3 -2,-0.3 -1,-0.1 0.101 74.7 142.1 -29.9 134.7 -15.8 2.9 -6.0 57 57 A E - 0 0 27 -45,-0.1 -46,-0.2 -3,-0.1 2,-0.1 -0.968 46.7 -99.1-172.3 165.9 -14.5 3.8 -2.5 58 58 A K E -D 31 0B 156 -27,-0.8 -27,-0.8 -2,-0.3 2,-0.3 -0.429 33.5-174.7 -92.0 169.6 -11.8 5.7 -0.6 59 59 A A E -D 30 0B 21 -29,-0.2 2,-0.5 -2,-0.1 -29,-0.2 -0.978 22.8-126.7-160.9 158.0 -8.6 4.4 0.9 60 60 A S E -D 29 0B 25 -31,-2.8 -31,-2.6 -2,-0.3 2,-0.5 -0.956 21.1-164.0-117.8 116.1 -5.7 5.4 3.0 61 61 A F E +D 28 0B 40 -2,-0.5 2,-0.3 -33,-0.2 -33,-0.2 -0.863 13.9 172.4-103.5 126.1 -2.2 4.8 1.7 62 62 A Y E +D 27 0B 123 -35,-3.6 -35,-1.9 -2,-0.5 2,-0.3 -0.871 2.8 168.2-127.8 161.1 0.7 5.0 4.1 63 63 A Y E +D 26 0B 93 -2,-0.3 2,-0.3 -37,-0.2 -37,-0.2 -0.951 2.0 163.6-161.0 172.9 4.4 4.2 3.9 64 64 A N E -D 25 0B 100 -39,-0.7 -39,-1.1 -2,-0.3 2,-0.3 -0.962 18.7-136.3-178.2-178.9 7.8 4.6 5.6 65 65 A F E D 24 0B 67 -2,-0.3 -41,-0.3 -41,-0.2 -42,-0.1 -0.984 360.0 360.0-159.2 150.6 11.3 3.4 5.9 66 66 A W 0 0 165 -43,-2.1 -42,-0.2 -2,-0.3 -1,-0.1 0.198 360.0 360.0-168.7 360.0 13.9 2.5 8.5