==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 03-AUG-11 2LGX . COMPND 2 MOLECULE: FERMITIN FAMILY HOMOLOG 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.D.PERERA,Y.MA,J.YANG,J.HIRBAWI,E.F.PLOW,J.QIN . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6701.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 53.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 13.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 249 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-160.3 35.9 -2.2 8.2 2 2 A A - 0 0 81 1,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.252 360.0-101.7 179.3 82.3 33.4 -3.8 5.7 3 3 A L - 0 0 192 1,-0.1 -1,-0.3 2,-0.1 0, 0.0 0.074 63.0 -94.5 29.8 -91.9 33.9 -3.3 2.0 4 4 A D + 0 0 77 -3,-0.1 2,-1.3 6,-0.1 -1,-0.1 -0.181 49.4 170.2-172.1 -83.4 31.2 -0.6 1.6 5 5 A G > > + 0 0 11 1,-0.2 3,-1.2 6,-0.1 7,-1.0 0.016 56.4 110.1 74.9 -36.4 27.7 -1.5 0.5 6 6 A I T 3 5S+ 0 0 113 -2,-1.3 5,-0.2 5,-0.3 -1,-0.2 0.715 74.2 57.8 -42.5 -18.8 26.9 2.1 1.4 7 7 A R T 3 5S+ 0 0 192 3,-0.1 -1,-0.3 5,-0.1 6,-0.1 0.914 111.1 38.1 -81.6 -45.8 26.5 2.4 -2.4 8 8 A M T X>5S- 0 0 107 -3,-1.2 4,-3.2 4,-0.1 3,-0.8 -0.570 111.5 -84.9 -98.3 167.8 23.8 -0.2 -2.8 9 9 A P T 345S+ 0 0 89 0, 0.0 -3,-0.1 0, 0.0 8,-0.1 0.542 113.8 94.3 -51.7 2.7 20.9 -0.8 -0.3 10 10 A D T 34>> -Cd 29 92B 8 5,-2.4 4,-2.3 -2,-0.4 5,-0.7 -0.692 23.3-164.2 -89.3 101.9 -11.2 -2.6 6.0 25 25 A T T 345S+ 0 0 35 67,-2.4 4,-0.1 -2,-1.1 39,-0.0 -0.332 75.3 29.0 -77.0 165.0 -13.8 0.0 6.9 26 26 A D T 345S+ 0 0 151 1,-0.2 -1,-0.2 67,-0.1 67,-0.1 0.324 128.2 50.8 67.8 -16.0 -17.5 -1.0 7.0 27 27 A V T <45S- 0 0 79 -3,-0.7 -2,-0.2 65,-0.2 -1,-0.2 0.615 95.1-144.3-120.1 -29.6 -16.1 -4.4 7.9 28 28 A N T <5 + 0 0 137 -4,-2.3 -3,-0.2 1,-0.2 2,-0.2 0.637 61.0 112.1 73.6 16.5 -13.7 -3.4 10.8 29 29 A R B < -C 24 0B 88 -5,-0.7 -5,-2.4 -4,-0.1 2,-0.3 -0.483 53.4-144.0-106.6-178.6 -11.0 -6.0 10.0 30 30 A D + 0 0 98 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.2 -1.000 18.0 179.1-151.1 151.7 -7.6 -5.2 8.6 31 31 A V - 0 0 20 -9,-0.5 -9,-2.0 -2,-0.3 2,-0.3 -0.924 18.6-141.0-142.7 161.1 -5.0 -6.6 6.3 32 32 A T E -A 21 0A 78 -2,-0.3 2,-0.4 -11,-0.3 -11,-0.3 -0.973 7.3-133.3-133.3 149.0 -1.5 -5.2 5.3 33 33 A L E -A 20 0A 2 -13,-0.8 -13,-2.8 -2,-0.3 2,-0.9 -0.788 6.0-148.5 -99.5 143.2 0.5 -5.0 2.0 34 34 A R + 0 0 169 -2,-0.4 2,-0.3 -15,-0.2 -15,-0.2 -0.852 56.2 107.7-106.0 94.9 4.1 -6.0 1.8 35 35 A V - 0 0 7 -2,-0.9 -17,-0.6 -17,-0.2 2,-0.3 -0.868 53.7-124.5-153.7-171.7 5.4 -3.7 -1.0 36 36 A T > - 0 0 39 -2,-0.3 3,-2.5 -19,-0.1 43,-0.2 -0.823 53.9 -72.0-137.2 176.8 7.4 -0.6 -2.0 37 37 A G T 3 S+ 0 0 21 1,-0.3 44,-0.3 -2,-0.3 43,-0.2 0.413 124.0 70.0 -53.3 7.1 6.9 2.7 -3.8 38 38 A E T 3 + 0 0 115 42,-0.1 2,-0.3 40,-0.1 -1,-0.3 0.612 67.4 104.3-104.0 -16.8 6.7 0.5 -6.9 39 39 A V S < S- 0 0 3 -3,-2.5 40,-0.8 1,-0.1 41,-0.1 -0.487 73.8-122.1 -70.8 131.2 3.4 -1.3 -6.4 40 40 A H >> - 0 0 107 -2,-0.3 4,-3.1 1,-0.2 3,-2.2 -0.410 13.3-127.7 -67.5 144.9 0.7 0.1 -8.7 41 41 A I H 3> S+ 0 0 5 34,-0.4 4,-1.9 1,-0.3 3,-0.3 0.983 121.1 50.4 -57.4 -47.9 -2.4 1.4 -6.8 42 42 A G H 34 S+ 0 0 25 1,-0.3 4,-0.3 2,-0.2 -1,-0.3 0.560 115.7 45.6 -64.3 -0.5 -4.3 -0.8 -9.1 43 43 A G H <> S+ 0 0 14 -3,-2.2 4,-4.0 2,-0.1 5,-0.4 0.625 98.8 66.6-112.7 -25.4 -1.7 -3.4 -7.9 44 44 A V H X S+ 0 0 5 -4,-3.1 4,-1.0 -3,-0.3 -2,-0.2 0.927 107.4 42.9 -62.5 -40.6 -1.9 -2.5 -4.2 45 45 A M H X S+ 0 0 6 -4,-1.9 4,-5.4 -5,-0.2 5,-0.4 0.937 119.3 43.1 -72.1 -43.9 -5.5 -3.9 -4.3 46 46 A L H >>S+ 0 0 61 -4,-0.3 4,-5.0 -5,-0.3 5,-0.5 0.993 111.3 52.3 -65.8 -56.2 -4.4 -6.9 -6.4 47 47 A K H X5S+ 0 0 81 -4,-4.0 4,-1.1 1,-0.2 -1,-0.2 0.858 120.3 39.7 -47.5 -29.1 -1.3 -7.5 -4.4 48 48 A L H X5S+ 0 0 0 -4,-1.0 4,-2.7 -5,-0.4 -2,-0.3 0.937 116.6 44.8 -85.8 -56.3 -3.8 -7.4 -1.5 49 49 A V H <5S+ 0 0 11 -4,-5.4 -3,-0.2 1,-0.3 7,-0.2 0.934 114.9 53.2 -54.9 -37.6 -6.7 -9.3 -3.1 50 50 A E H <5S+ 0 0 130 -4,-5.0 -1,-0.3 -5,-0.4 -2,-0.2 0.948 106.0 52.3 -62.1 -44.4 -4.0 -11.7 -4.3 51 51 A K H <>> -FG 70 90D 12 5,-1.8 4,-2.6 -2,-0.4 3,-0.6 -0.828 5.5-152.1 -97.1 116.0 -6.8 6.7 2.9 66 66 A E T 345S+ 0 0 85 23,-0.9 -1,-0.1 -2,-0.7 24,-0.1 0.792 91.2 72.0 -54.6 -26.4 -6.9 8.0 6.5 67 67 A K T 345S- 0 0 129 22,-0.3 -1,-0.2 1,-0.2 23,-0.0 0.970 129.5 -6.8 -57.1 -54.4 -4.8 10.9 5.3 68 68 A K T <45S- 0 0 92 -3,-0.6 -2,-0.2 2,-0.0 -1,-0.2 0.193 91.5-121.1-125.7 12.3 -7.6 12.6 3.3 69 69 A R T <5S+ 0 0 155 -4,-2.6 -3,-0.2 1,-0.1 2,-0.1 0.882 73.1 129.3 48.9 38.5 -10.2 9.9 3.7 70 70 A T E < -F 65 0D 29 -5,-0.6 -5,-1.8 -7,-0.0 2,-0.3 -0.212 58.1-102.3-104.4-161.1 -10.2 9.7 -0.2 71 71 A W E -F 64 0D 135 -7,-0.2 2,-0.6 -2,-0.1 -7,-0.2 -0.942 14.2-137.6-128.6 152.0 -9.8 6.7 -2.5 72 72 A L E +F 63 0D 8 -9,-0.9 -9,-0.6 -2,-0.3 3,-0.1 -0.924 39.9 145.4-110.2 113.8 -6.9 5.4 -4.6 73 73 A L + 0 0 92 -2,-0.6 -1,-0.1 -11,-0.1 -31,-0.0 0.757 46.0 63.7-112.1 -70.1 -8.0 4.2 -8.1 74 74 A K > - 0 0 71 1,-0.1 3,-0.6 -33,-0.1 -33,-0.2 -0.258 61.3-146.6 -64.0 148.0 -5.5 4.8 -10.9 75 75 A T T 3 S+ 0 0 56 1,-0.2 3,-0.4 -34,-0.2 -34,-0.4 0.790 88.2 85.3 -81.4 -28.5 -2.1 3.1 -10.9 76 76 A H T 3 S+ 0 0 130 1,-0.3 2,-0.4 -36,-0.1 -1,-0.2 0.714 87.7 57.4 -47.1 -20.1 -0.5 6.2 -12.6 77 77 A W S < S- 0 0 110 -3,-0.6 -1,-0.3 4,-0.1 5,-0.2 -0.521 81.9-170.3-114.1 67.1 -0.2 7.5 -9.0 78 78 A T > - 0 0 11 -3,-0.4 4,-1.9 -2,-0.4 5,-0.3 0.039 42.8 -96.3 -46.8 164.5 1.9 4.8 -7.3 79 79 A L H >>>S+ 0 0 9 -40,-0.8 5,-2.2 1,-0.2 4,-1.1 0.974 130.9 48.0 -52.3 -53.2 2.1 5.2 -3.5 80 80 A D H >45S+ 0 0 95 3,-0.3 3,-1.6 1,-0.2 -1,-0.2 0.928 102.1 63.2 -55.5 -43.7 5.5 6.9 -3.9 81 81 A K H 345S+ 0 0 98 1,-0.3 -1,-0.2 -44,-0.3 -2,-0.2 0.929 107.2 44.1 -47.6 -44.1 3.9 9.1 -6.7 82 82 A Y H <<5S- 0 0 83 -4,-1.9 -1,-0.3 -3,-0.6 -2,-0.2 0.718 124.7-112.2 -72.9 -18.1 1.7 10.5 -3.9 83 83 A G T <<5 + 0 0 50 -3,-1.6 2,-0.3 -4,-1.1 -3,-0.3 0.813 60.6 163.1 89.9 33.1 4.9 10.6 -1.7 84 84 A I < + 0 0 13 -5,-2.2 -1,-0.2 -6,-0.2 2,-0.2 -0.625 11.5 175.8 -87.4 146.0 3.6 7.8 0.6 85 85 A Q > - 0 0 122 -2,-0.3 3,-1.0 -49,-0.0 -67,-0.1 -0.430 54.7 -71.3-127.0-157.1 6.0 6.0 2.9 86 86 A A T 3 S+ 0 0 39 1,-0.2 -65,-0.1 -2,-0.2 -2,-0.0 0.587 124.4 72.0 -80.7 -6.5 5.7 3.3 5.6 87 87 A D T 3 S+ 0 0 133 2,-0.1 2,-0.7 -67,-0.0 -1,-0.2 0.345 76.1 102.2 -87.7 8.6 4.0 5.9 7.8 88 88 A A < - 0 0 9 -3,-1.0 -67,-0.9 -22,-0.0 2,-0.8 -0.818 59.4-160.5 -96.4 114.8 1.0 5.7 5.5 89 89 A K B -b 21 0A 90 -2,-0.7 -23,-0.9 -69,-0.1 -22,-0.3 -0.820 14.9-163.3 -96.0 111.3 -1.8 3.7 7.0 90 90 A L B -G 65 0D 5 -69,-3.2 2,-0.3 -2,-0.8 -25,-0.2 -0.391 3.5-155.1 -89.6 171.8 -4.2 2.6 4.2 91 91 A Q - 0 0 15 -27,-0.7 2,-0.3 -69,-0.3 -67,-0.3 -0.850 10.5-130.7-135.9 171.8 -7.7 1.3 4.5 92 92 A F B +d 24 0B 7 -69,-6.5 -67,-2.4 -29,-0.3 -29,-0.3 -0.929 31.4 163.3-124.4 148.0 -10.0 -0.9 2.3 93 93 A T B E 62 0C 23 -31,-3.1 -31,-3.1 -2,-0.3 -67,-0.1 -0.964 360.0 360.0-165.0 148.8 -13.5 0.0 1.3 94 94 A P 0 0 97 0, 0.0 -1,-0.2 0, 0.0 -31,-0.0 1.000 360.0 360.0 -70.1 360.0 -16.2 -0.9 -1.2