==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIVIRAL PROTEIN 21-JAN-10 3LHC . COMPND 2 MOLECULE: CYANOVIRIN-N; . SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC ELLIPSOSPORUM; . AUTHOR E.MATEI,A.ZHENG,W.FUREY,J.ROSE,C.AIKEN,A.M.GRONENBORN . 100 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8639.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 66.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 39 39.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 212 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 159.0 -10.8 18.7 8.0 2 2 A G + 0 0 74 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.475 360.0 152.4 79.0-128.2 -8.5 21.5 9.0 3 3 A K > + 0 0 163 -2,-0.3 3,-1.6 1,-0.1 4,-0.4 0.629 18.1 148.2 71.0 21.5 -6.0 22.9 6.5 4 4 A F G > + 0 0 93 1,-0.3 3,-1.8 2,-0.2 4,-0.2 0.835 61.2 68.4 -53.9 -36.3 -5.9 26.5 7.9 5 5 A S G > S+ 0 0 72 1,-0.3 3,-0.8 2,-0.2 -1,-0.3 0.759 85.4 69.6 -64.2 -21.9 -2.2 26.9 6.9 6 6 A Q G < S+ 0 0 161 -3,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.776 115.1 22.9 -66.7 -25.8 -3.0 27.0 3.2 7 7 A T G < S+ 0 0 68 -3,-1.8 16,-2.9 -4,-0.4 2,-0.3 0.025 112.9 76.0-133.1 31.2 -4.8 30.3 3.4 8 8 A a E < -A 22 0A 20 -3,-0.8 2,-0.3 14,-0.2 14,-0.2 -0.897 51.7-176.8-132.4 162.2 -3.3 31.9 6.5 9 9 A Y E +A 21 0A 110 12,-2.4 12,-2.5 -2,-0.3 -3,-0.0 -0.934 58.2 48.1-151.2 174.4 -0.0 33.6 7.3 10 10 A N E S+ 0 0 125 -2,-0.3 -1,-0.1 1,-0.2 2,-0.1 0.864 74.1 176.3 57.2 37.4 1.9 35.1 10.2 11 11 A S E + 0 0 59 9,-0.1 2,-0.3 -3,-0.1 9,-0.2 -0.439 4.6 175.3 -73.0 147.9 1.0 32.1 12.3 12 12 A A E -A 19 0A 55 7,-2.4 7,-2.8 -2,-0.1 2,-0.4 -0.992 23.1-149.2-151.9 147.6 2.4 31.9 15.8 13 13 A I E +A 18 0A 115 -2,-0.3 2,-0.4 5,-0.2 5,-0.2 -0.983 17.0 172.4-114.6 128.8 2.2 29.6 18.8 14 14 A Q E > -A 17 0A 165 3,-2.3 3,-2.4 -2,-0.4 2,-0.3 -0.965 68.4 -44.5-133.5 119.6 2.6 31.0 22.3 15 15 A G T 3 S- 0 0 75 -2,-0.4 20,-0.0 1,-0.3 0, 0.0 -0.451 124.9 -23.1 60.4-121.6 1.9 28.6 25.2 16 16 A S T 3 S+ 0 0 43 -2,-0.3 20,-3.0 -3,-0.1 2,-0.5 0.338 116.9 100.8 -99.0 6.4 -1.3 26.8 24.1 17 17 A V E < -AB 14 35A 44 -3,-2.4 -3,-2.3 18,-0.2 2,-0.5 -0.826 52.5-160.6-108.7 125.6 -2.6 29.5 21.8 18 18 A L E -AB 13 34A 30 16,-2.5 16,-2.2 -2,-0.5 2,-0.4 -0.872 12.2-173.5 -95.6 129.9 -2.4 29.6 18.0 19 19 A T E +AB 12 33A 48 -7,-2.8 -7,-2.4 -2,-0.5 2,-0.3 -0.972 11.6 160.2-122.8 140.1 -2.7 33.0 16.3 20 20 A S E - B 0 32A 5 12,-2.3 12,-2.2 -2,-0.4 2,-0.6 -0.991 38.8-125.6-155.7 159.8 -2.9 33.5 12.6 21 21 A T E -AB 9 31A 16 -12,-2.5 -12,-2.4 -2,-0.3 2,-0.3 -0.948 39.6-170.7-112.4 116.3 -4.0 35.9 9.9 22 22 A a E -AB 8 30A 35 8,-3.0 8,-1.9 -2,-0.6 -14,-0.2 -0.845 23.8-107.2-122.6 147.2 -6.4 34.2 7.5 23 23 A E E - B 0 29A 99 -16,-2.9 6,-0.2 -2,-0.3 2,-0.2 -0.428 29.4-144.0 -71.6 135.6 -8.1 35.0 4.2 24 24 A R > - 0 0 172 4,-2.8 3,-1.7 -2,-0.2 -1,-0.1 -0.604 26.4-109.2 -90.7 159.6 -11.8 35.8 4.2 25 25 A T T 3 S+ 0 0 143 1,-0.3 3,-0.1 -2,-0.2 -1,-0.1 0.897 118.3 47.9 -52.5 -45.0 -14.1 34.7 1.4 26 26 A N T 3 S- 0 0 160 1,-0.3 -1,-0.3 -3,-0.0 -3,-0.0 0.098 124.2 -93.3 -92.8 26.9 -14.5 38.2 0.0 27 27 A G S < S+ 0 0 52 -3,-1.7 -1,-0.3 1,-0.2 -2,-0.0 0.024 86.2 71.7 87.0 165.2 -10.8 39.0 0.1 28 28 A G S S- 0 0 48 -3,-0.1 -4,-2.8 -5,-0.1 2,-0.3 -0.115 72.8 -93.9 72.8 179.5 -8.8 40.6 2.8 29 29 A Y E -B 23 0A 108 -6,-0.2 2,-0.3 -4,-0.0 -6,-0.2 -0.807 18.0-154.9-136.5 161.1 -7.9 39.1 6.1 30 30 A N E -B 22 0A 95 -8,-1.9 -8,-3.0 -2,-0.3 2,-0.5 -0.993 16.9-140.0-138.5 142.0 -8.8 38.6 9.7 31 31 A T E +B 21 0A 84 -2,-0.3 2,-0.3 -10,-0.3 -10,-0.2 -0.878 33.5 158.2-104.2 132.0 -6.5 37.8 12.6 32 32 A S E -B 20 0A 65 -12,-2.2 -12,-2.3 -2,-0.5 2,-0.3 -0.937 25.6-142.6-146.0 164.8 -7.8 35.4 15.2 33 33 A S E -B 19 0A 76 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.897 3.9-161.4-127.7 160.8 -6.6 33.0 17.9 34 34 A I E -B 18 0A 93 -16,-2.2 -16,-2.5 -2,-0.3 2,-0.8 -0.976 17.7-137.2-143.0 129.2 -7.6 29.6 19.3 35 35 A D E -B 17 0A 93 -2,-0.3 3,-0.4 -18,-0.2 -18,-0.2 -0.792 18.9-174.8 -88.0 112.8 -6.6 28.2 22.6 36 36 A L >> + 0 0 39 -20,-3.0 4,-1.6 -2,-0.8 3,-1.6 0.415 53.6 104.0 -89.0 -0.3 -5.7 24.5 22.0 37 37 A N T 34 S+ 0 0 112 1,-0.3 3,-0.3 -21,-0.3 -1,-0.2 0.905 88.9 36.9 -53.1 -42.2 -5.2 23.5 25.6 38 38 A S T 34 S+ 0 0 110 -3,-0.4 -1,-0.3 1,-0.2 -2,-0.1 0.430 117.0 51.5 -92.1 2.0 -8.5 21.6 25.8 39 39 A V T <4 S+ 0 0 62 -3,-1.6 2,-0.4 1,-0.2 -1,-0.2 0.462 106.2 56.5-116.8 -9.0 -8.5 20.2 22.3 40 40 A I S < S- 0 0 49 -4,-1.6 2,-0.3 -3,-0.3 9,-0.2 -0.993 70.4-161.3-122.8 136.3 -5.0 18.7 22.4 41 41 A A E -C 48 0B 43 7,-2.8 7,-2.9 -2,-0.4 2,-0.6 -0.829 15.3-137.7-114.0 151.5 -4.0 16.1 25.0 42 42 A A E -C 47 0B 84 -2,-0.3 2,-0.5 5,-0.2 5,-0.2 -0.957 25.1-178.4-105.5 116.7 -0.6 15.0 26.2 43 43 A V E > -C 46 0B 82 3,-2.8 3,-1.5 -2,-0.6 -2,-0.0 -0.952 68.1 -32.5-122.3 111.5 -0.6 11.2 26.6 44 44 A D T 3 S- 0 0 170 -2,-0.5 -1,-0.1 1,-0.3 3,-0.1 0.862 127.7 -41.9 45.8 45.4 2.6 9.5 27.8 45 45 A G T 3 S+ 0 0 87 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.493 119.1 104.7 90.3 4.4 4.8 12.2 26.1 46 46 A S E < -C 43 0B 47 -3,-1.5 -3,-2.8 2,-0.0 2,-0.3 -0.973 67.4-127.3-125.9 130.5 2.8 12.3 22.8 47 47 A L E +C 42 0B 135 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.587 35.4 178.8 -75.1 132.7 0.4 15.1 21.6 48 48 A K E -C 41 0B 107 -7,-2.9 -7,-2.8 -2,-0.3 3,-0.1 -0.926 31.7-108.5-136.8 150.9 -3.0 13.7 20.5 49 49 A W - 0 0 182 -2,-0.3 -9,-0.2 -9,-0.2 -10,-0.0 -0.424 59.8 -76.4 -74.0 159.9 -6.2 15.1 19.2 50 50 A P - 0 0 43 0, 0.0 -1,-0.2 0, 0.0 -11,-0.1 -0.095 29.0-156.2 -64.1 158.6 -9.1 15.0 21.7 51 51 A S - 0 0 115 -3,-0.1 5,-0.1 5,-0.0 -12,-0.0 -0.377 19.1-171.2-123.0 51.3 -11.0 11.9 22.5 52 52 A N > - 0 0 90 1,-0.1 3,-1.3 3,-0.1 4,-0.1 -0.182 24.5-129.5 -49.1 132.7 -14.3 13.5 23.7 53 53 A F G >> S+ 0 0 106 1,-0.3 3,-1.8 2,-0.2 4,-1.1 0.758 98.0 65.4 -65.7 -27.8 -16.3 10.6 25.2 54 54 A I G 34 S+ 0 0 133 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.771 96.8 59.2 -69.1 -21.2 -19.7 11.2 23.5 55 55 A E G <4 S+ 0 0 156 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.390 119.6 27.5 -81.1 -2.0 -18.0 10.3 20.1 56 56 A A T <4 S+ 0 0 41 -3,-1.8 17,-2.9 -4,-0.1 2,-0.3 0.373 113.1 69.0-137.4 -1.0 -17.0 6.9 21.4 57 57 A b E < -D 72 0C 20 -4,-1.1 2,-0.3 15,-0.2 15,-0.2 -0.879 49.8-167.5-132.6 154.7 -19.6 6.0 24.1 58 58 A R E +D 71 0C 128 13,-2.9 13,-2.4 -2,-0.3 -3,-0.0 -0.876 63.6 31.4-132.7 163.4 -23.3 5.1 24.4 59 59 A N E - 0 0 81 -2,-0.3 2,-0.3 11,-0.2 -1,-0.2 0.916 68.2-167.6 59.1 50.5 -25.8 4.8 27.3 60 60 A T E + 0 0 74 -3,-0.1 2,-0.3 10,-0.1 10,-0.2 -0.546 15.7 167.9 -70.2 135.2 -24.4 7.5 29.5 61 61 A Q E -D 69 0C 109 8,-2.4 8,-2.8 -2,-0.3 2,-0.6 -0.982 41.2-111.5-144.1 155.9 -26.0 7.3 33.0 62 62 A L E -D 68 0C 120 -2,-0.3 2,-0.5 6,-0.2 6,-0.2 -0.825 32.3-159.1 -86.5 124.2 -25.6 8.7 36.5 63 63 A A E >> -D 67 0C 36 4,-3.0 4,-2.2 -2,-0.6 3,-0.7 -0.938 58.2 -36.6-105.3 122.9 -24.5 5.8 38.8 64 64 A G T 34 S- 0 0 73 -2,-0.5 -2,-0.0 1,-0.2 0, 0.0 -0.351 111.4 -40.2 63.5-138.1 -25.2 6.4 42.4 65 65 A S T 34 S+ 0 0 113 -2,-0.1 -1,-0.2 1,-0.0 -3,-0.0 0.644 135.4 10.1 -97.8 -16.7 -24.7 10.0 43.5 66 66 A S T <4 S+ 0 0 16 -3,-0.7 20,-2.4 20,-0.0 21,-0.5 0.443 92.2 106.5-146.2 0.7 -21.6 10.9 41.6 67 67 A E E < -DE 63 85C 38 -4,-2.2 -4,-3.0 18,-0.2 2,-0.6 -0.734 49.6-148.8 -98.0 137.0 -20.4 8.4 39.0 68 68 A L E -DE 62 84C 35 16,-2.9 16,-2.0 -2,-0.4 2,-0.3 -0.910 23.1-172.1 -94.7 122.0 -20.7 8.8 35.3 69 69 A A E +DE 61 83C 21 -8,-2.8 -8,-2.4 -2,-0.6 2,-0.3 -0.881 13.5 150.2-112.8 147.9 -21.2 5.3 33.7 70 70 A A E - E 0 82C 9 12,-2.3 12,-2.4 -2,-0.3 2,-0.5 -0.968 45.2-113.6-159.9 171.0 -21.1 4.5 30.0 71 71 A E E -DE 58 81C 53 -13,-2.4 -13,-2.9 -2,-0.3 2,-0.3 -0.987 41.6-169.1-112.1 121.1 -20.3 1.8 27.5 72 72 A b E -DE 57 80C 27 8,-2.6 8,-2.5 -2,-0.5 2,-0.4 -0.892 22.5-109.7-121.3 149.3 -17.4 2.9 25.4 73 73 A K E - E 0 79C 120 -17,-2.9 6,-0.2 -2,-0.3 2,-0.1 -0.555 28.3-145.5 -80.3 127.6 -15.8 1.5 22.2 74 74 A T > - 0 0 42 4,-3.0 3,-1.3 -2,-0.4 -1,-0.1 -0.348 32.8-101.8 -80.2 168.5 -12.4 -0.1 22.4 75 75 A A T 3 S+ 0 0 118 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.829 125.9 58.9 -58.4 -30.7 -9.8 0.1 19.7 76 76 A A T 3 S- 0 0 91 2,-0.1 -1,-0.3 1,-0.0 -3,-0.0 0.677 121.4-110.1 -74.2 -18.7 -10.9 -3.4 18.7 77 77 A G S < S+ 0 0 42 -3,-1.3 2,-0.3 1,-0.4 -2,-0.1 0.398 76.3 120.4 110.2 -1.8 -14.4 -2.1 18.1 78 78 A Q - 0 0 117 -5,-0.0 -4,-3.0 -6,-0.0 2,-0.5 -0.673 61.5-120.5 -96.0 150.5 -16.4 -3.6 21.0 79 79 A F E -E 73 0C 73 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.772 33.9-178.4 -90.5 129.0 -18.3 -1.7 23.6 80 80 A V E -E 72 0C 61 -8,-2.5 -8,-2.6 -2,-0.5 2,-0.2 -0.899 31.1 -97.9-123.6 157.3 -17.2 -2.3 27.2 81 81 A S E +E 71 0C 107 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.515 46.8 164.3 -74.9 139.3 -18.4 -0.9 30.6 82 82 A T E -E 70 0C 69 -12,-2.4 -12,-2.3 -2,-0.2 2,-0.3 -0.971 12.4-175.6-148.4 157.8 -16.6 2.0 32.1 83 83 A K E -E 69 0C 137 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.980 7.0-163.4-151.8 161.4 -17.2 4.6 34.8 84 84 A I E -E 68 0C 97 -16,-2.0 -16,-2.9 -2,-0.3 2,-0.9 -0.987 27.9-118.0-148.1 138.6 -15.5 7.6 36.3 85 85 A N E > -E 67 0C 47 -2,-0.3 3,-2.3 -18,-0.2 4,-0.3 -0.705 17.0-162.2 -83.6 108.4 -16.2 9.4 39.6 86 86 A L G >> S+ 0 0 67 -20,-2.4 4,-2.6 -2,-0.9 3,-1.5 0.767 86.0 74.4 -62.7 -23.7 -17.3 12.9 38.8 87 87 A D G 34 S+ 0 0 112 -21,-0.5 -1,-0.3 1,-0.3 -20,-0.1 0.663 79.9 75.6 -60.7 -14.5 -16.5 13.8 42.4 88 88 A D G <4 S- 0 0 101 -3,-2.3 -1,-0.3 1,-0.1 -2,-0.2 0.855 122.2 -3.1 -63.0 -34.4 -12.8 13.7 41.4 89 89 A H T <4 S+ 0 0 87 -3,-1.5 11,-2.5 -4,-0.3 2,-0.6 0.487 106.4 94.6-142.6 -9.1 -13.0 17.0 39.6 90 90 A I E < -F 99 0D 59 -4,-2.6 2,-0.3 9,-0.2 9,-0.2 -0.859 53.3-174.3-100.1 122.4 -16.6 18.5 39.6 91 91 A A E -F 98 0D 15 7,-3.0 7,-2.4 -2,-0.6 2,-0.9 -0.820 31.4-125.8-114.4 150.7 -17.1 21.0 42.5 92 92 A N E -F 97 0D 118 -2,-0.3 2,-0.9 5,-0.2 5,-0.2 -0.875 30.2-172.3 -88.6 101.9 -20.0 22.9 43.9 93 93 A I E > S-F 96 0D 74 3,-2.8 3,-1.6 -2,-0.9 -2,-0.0 -0.871 70.9 -42.0-100.2 100.7 -18.7 26.5 43.9 94 94 A D T 3 S- 0 0 164 -2,-0.9 -1,-0.2 1,-0.3 3,-0.1 0.849 125.0 -37.2 45.2 47.3 -21.3 28.6 45.7 95 95 A G T 3 S+ 0 0 65 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.368 120.5 97.6 96.2 -2.9 -24.2 26.8 44.0 96 96 A T E < S-F 93 0D 78 -3,-1.6 -3,-2.8 2,-0.0 2,-0.3 -0.963 72.9-119.8-124.6 134.8 -22.7 26.3 40.5 97 97 A L E +F 92 0D 138 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.563 39.9 173.5 -71.4 127.1 -21.1 23.2 39.1 98 98 A K E -F 91 0D 109 -7,-2.4 -7,-3.0 -2,-0.3 2,-0.3 -0.995 30.2-124.8-138.4 141.7 -17.5 23.9 38.0 99 99 A Y E F 90 0D 167 -2,-0.4 -9,-0.2 -9,-0.2 -10,-0.0 -0.653 360.0 360.0 -77.2 137.4 -14.6 21.8 36.8 100 100 A E 0 0 142 -11,-2.5 -1,-0.2 -2,-0.3 -10,-0.2 0.389 360.0 360.0-140.5 360.0 -11.4 22.0 38.7