==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN, MEMBRANE PROTEIN 29-AUG-11 2LIF . COMPND 2 MOLECULE: CORE PROTEIN P21; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.MONTSERRET,F.PENIN . 27 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3000.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 48.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 267 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 154.1 -21.3 4.2 1.2 2 2 A K + 0 0 211 3,-0.0 2,-0.1 1,-0.0 0, 0.0 -0.881 360.0 107.2-113.9 103.4 -21.9 0.4 1.5 3 171 A G S S- 0 0 77 -2,-0.6 -1,-0.0 0, 0.0 0, 0.0 -0.098 72.8 -35.9-138.2-121.4 -19.9 -1.7 -1.1 4 172 A F - 0 0 169 -2,-0.1 2,-1.7 0, 0.0 3,-0.4 -0.967 40.4-136.5-121.8 134.2 -16.9 -4.0 -0.8 5 173 A P + 0 0 97 0, 0.0 4,-0.4 0, 0.0 -3,-0.0 -0.509 59.0 128.3 -85.0 70.6 -13.9 -3.5 1.5 6 174 A F >> + 0 0 119 -2,-1.7 4,-1.8 2,-0.1 3,-0.8 0.799 59.3 68.1 -94.1 -33.0 -11.1 -4.3 -1.0 7 175 A S H 3> S+ 0 0 77 -3,-0.4 4,-3.2 1,-0.2 5,-0.3 0.808 92.0 64.2 -57.1 -28.4 -8.9 -1.2 -0.5 8 176 A I H 3> S+ 0 0 116 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.926 105.6 43.1 -63.0 -42.5 -8.1 -2.5 3.0 9 177 A F H <> S+ 0 0 147 -3,-0.8 4,-2.9 -4,-0.4 -2,-0.2 0.866 114.1 51.9 -71.6 -33.8 -6.3 -5.5 1.4 10 178 A L H X S+ 0 0 95 -4,-1.8 4,-3.0 2,-0.2 -2,-0.2 0.951 114.7 41.5 -66.9 -47.2 -4.7 -3.2 -1.2 11 179 A L H X S+ 0 0 112 -4,-3.2 4,-2.3 2,-0.2 -2,-0.2 0.927 116.4 49.2 -66.8 -43.0 -3.4 -0.9 1.6 12 180 A A H X S+ 0 0 55 -4,-2.6 4,-1.5 -5,-0.3 -2,-0.2 0.945 115.3 44.5 -61.8 -44.4 -2.4 -3.9 3.8 13 181 A L H X S+ 0 0 78 -4,-2.9 4,-2.6 1,-0.2 5,-0.2 0.922 110.4 55.2 -65.6 -41.5 -0.6 -5.4 0.8 14 182 A L H X S+ 0 0 96 -4,-3.0 4,-1.0 1,-0.2 -1,-0.2 0.888 105.6 52.5 -59.7 -37.5 1.0 -2.0 -0.1 15 183 A S H < S+ 0 0 74 -4,-2.3 4,-0.3 1,-0.2 -1,-0.2 0.880 111.1 47.4 -66.8 -34.6 2.4 -1.8 3.5 16 184 A C H >< S+ 0 0 87 -4,-1.5 3,-0.8 1,-0.2 -2,-0.2 0.909 114.9 44.4 -72.9 -41.6 4.0 -5.3 3.0 17 185 A I H 3< S+ 0 0 94 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.588 110.6 56.7 -80.1 -8.1 5.4 -4.5 -0.5 18 186 A T T 3< S+ 0 0 69 -4,-1.0 4,-0.5 -5,-0.2 -1,-0.2 0.404 85.5 80.9-102.2 2.9 6.7 -1.0 0.7 19 187 A V S X S+ 0 0 102 -3,-0.8 3,-0.8 -4,-0.3 4,-0.5 0.968 96.6 39.7 -73.4 -50.9 8.9 -2.4 3.7 20 188 A P T 3> S+ 0 0 82 0, 0.0 4,-1.4 0, 0.0 -1,-0.2 0.567 95.5 84.1 -75.3 -7.5 12.0 -3.4 1.6 21 189 A V H 3> S+ 0 0 65 1,-0.2 4,-1.5 2,-0.2 5,-0.2 0.863 86.2 56.3 -64.3 -31.5 11.7 -0.3 -0.7 22 190 A S H <> S+ 0 0 79 -3,-0.8 4,-1.9 -4,-0.5 3,-0.3 0.938 106.6 48.9 -64.4 -44.1 13.7 1.7 2.0 23 191 A A H > S+ 0 0 60 -4,-0.5 4,-0.7 1,-0.2 -1,-0.2 0.812 107.7 56.3 -65.2 -28.7 16.6 -0.8 1.8 24 192 A A H < S+ 0 0 69 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.853 109.0 45.8 -72.8 -33.3 16.5 -0.5 -2.0 25 193 A Q H < S+ 0 0 171 -4,-1.5 -2,-0.2 -3,-0.3 -1,-0.2 0.837 110.4 52.5 -79.1 -32.9 17.0 3.3 -1.9 26 194 A V H < 0 0 123 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.630 360.0 360.0 -78.7 -11.1 19.8 3.2 0.7 27 195 A K < 0 0 209 -4,-0.7 -2,-0.1 -5,-0.2 -3,-0.1 0.832 360.0 360.0-104.2 360.0 21.8 0.6 -1.4