==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL TRANSPORT 31-AUG-11 2LIR . COMPND 2 MOLECULE: CYTOCHROME C ISO-1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; . AUTHOR W.LAN,Z.WANG,Z.YANG,J.ZHU,T.YING,X.JIANG,X.ZHANG,H.WU,M.LIU, . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6851.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 48.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 29.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 140 0, 0.0 2,-0.4 0, 0.0 67,-0.1 0.000 360.0 360.0 360.0 -55.2 -14.5 2.4 7.4 2 -4 A E - 0 0 128 65,-0.1 2,-0.5 68,-0.0 0, 0.0 -0.811 360.0-141.0-101.4 139.4 -14.2 6.2 6.9 3 -3 A F - 0 0 68 -2,-0.4 2,-0.3 67,-0.0 64,-0.1 -0.842 16.5-165.3-101.0 129.9 -11.7 7.7 4.5 4 -2 A K - 0 0 89 -2,-0.5 2,-0.2 89,-0.1 97,-0.1 -0.834 5.1-171.4-112.0 151.0 -9.9 10.9 5.5 5 -1 A A + 0 0 69 -2,-0.3 93,-0.2 1,-0.1 92,-0.1 -0.723 19.6 155.8-129.9-178.5 -7.9 13.2 3.2 6 1 A G - 0 0 62 91,-0.2 2,-0.3 -2,-0.2 -1,-0.1 -0.060 67.4 -18.7-168.0 -78.1 -5.6 16.2 3.6 7 2 A S > - 0 0 32 87,-0.2 4,-1.4 1,-0.1 95,-0.1 -0.875 37.5-162.4-154.2 117.2 -3.1 17.0 0.8 8 3 A A H > S+ 0 0 15 -2,-0.3 4,-3.8 2,-0.2 5,-0.3 0.851 85.2 76.6 -68.9 -31.6 -1.8 14.7 -1.9 9 4 A K H > S+ 0 0 156 1,-0.2 4,-1.4 2,-0.2 3,-0.4 0.946 105.7 31.2 -42.7 -67.2 1.2 17.0 -2.6 10 5 A K H > S+ 0 0 145 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.899 117.1 60.0 -61.3 -37.4 3.0 15.8 0.5 11 6 A G H X S+ 0 0 0 -4,-1.4 4,-1.8 1,-0.2 -1,-0.2 0.897 100.4 55.6 -59.1 -37.5 1.4 12.4 0.1 12 7 A A H X S+ 0 0 12 -4,-3.8 4,-1.4 -3,-0.4 -1,-0.2 0.935 112.7 40.8 -62.5 -42.9 3.0 12.0 -3.4 13 8 A T H X S+ 0 0 72 -4,-1.4 4,-2.7 -5,-0.3 -1,-0.2 0.841 105.6 66.2 -74.6 -30.9 6.5 12.6 -1.9 14 9 A L H < S+ 0 0 22 -4,-2.7 5,-0.5 1,-0.2 4,-0.4 0.949 103.8 45.7 -56.3 -45.4 5.7 10.4 1.1 15 10 A F H ><>S+ 0 0 19 -4,-1.8 5,-2.5 1,-0.2 3,-1.2 0.940 113.0 50.3 -62.7 -45.1 5.5 7.4 -1.2 16 11 A K H 3<5S+ 0 0 106 -4,-1.4 -1,-0.2 1,-0.3 -2,-0.2 0.855 115.0 43.3 -62.9 -34.3 8.7 8.5 -2.9 17 12 A T T 3<5S+ 0 0 79 -4,-2.7 -1,-0.3 -5,-0.1 -2,-0.2 0.385 133.3 15.0 -93.8 5.7 10.5 8.9 0.4 18 13 A R T X>5S+ 0 0 112 -3,-1.2 3,-0.7 -4,-0.4 4,-0.6 0.472 126.7 38.0-140.0 -66.1 9.2 5.7 2.0 19 14 A C H >>5S+ 0 0 28 -5,-0.5 4,-3.8 -4,-0.3 3,-1.0 0.850 106.7 68.9 -66.1 -30.4 7.5 3.0 -0.3 20 15 A L H 34 S- 0 0 134 1,-0.1 3,-1.2 2,-0.1 2,-0.3 -0.225 89.7-109.2 -54.2 142.2 6.8 0.9 -12.4 27 22 A K T 3 S+ 0 0 125 1,-0.3 -1,-0.1 22,-0.1 11,-0.1 -0.579 103.5 13.2 -76.2 131.3 4.6 -2.1 -13.0 28 23 A G T 3 S+ 0 0 29 -2,-0.3 -1,-0.3 9,-0.3 -2,-0.1 0.805 92.9 178.7 75.5 25.6 6.5 -5.4 -12.8 29 24 A G < - 0 0 5 -3,-1.2 7,-0.2 -5,-0.3 22,-0.2 0.024 50.2 -85.0 -53.5 171.8 9.4 -3.5 -11.1 30 25 A P - 0 0 79 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.690 49.6-142.0 -55.7 -18.8 12.5 -5.5 -10.1 31 26 A H + 0 0 19 20,-0.0 -8,-0.1 4,-0.0 -9,-0.0 0.969 35.6 168.8 54.1 52.1 10.7 -6.3 -6.8 32 27 A K S S+ 0 0 168 -10,-0.2 -10,-0.1 1,-0.1 -9,-0.1 0.970 72.4 4.7 -61.0 -85.9 14.0 -5.9 -4.9 33 28 A V S S- 0 0 109 -12,-0.3 -11,-0.1 -11,-0.2 -10,-0.1 0.951 141.4 -7.0 -67.7 -47.9 13.1 -5.9 -1.2 34 29 A G S S- 0 0 14 -12,-1.0 -1,-0.1 1,-0.1 -10,-0.1 -0.881 90.0 -69.7-141.5 174.4 9.4 -6.5 -1.8 35 30 A P - 0 0 20 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.189 50.7-116.7 -62.4 156.0 6.8 -6.8 -4.6 36 31 A N - 0 0 6 -7,-0.2 -8,-0.3 -13,-0.2 13,-0.3 -0.850 26.5-167.6-102.6 130.3 5.9 -3.6 -6.5 37 32 A L + 0 0 39 -2,-0.5 -9,-0.3 -10,-0.1 -8,-0.2 0.659 27.8 140.5 -80.5-117.9 2.3 -2.4 -6.3 38 33 A H S S+ 0 0 99 -11,-0.1 -10,-0.1 1,-0.1 -2,-0.1 0.950 84.0 15.7 73.2 89.0 1.1 0.4 -8.7 39 34 A G S > S+ 0 0 47 64,-0.1 3,-0.8 -12,-0.0 -1,-0.1 0.494 87.5 115.5 99.1 3.4 -2.5 -0.4 -9.8 40 35 A I G > + 0 0 12 1,-0.2 3,-2.9 2,-0.1 24,-0.3 0.659 49.2 91.7 -80.4 -11.2 -3.3 -3.0 -7.1 41 36 A F G 3 S+ 0 0 11 1,-0.3 -1,-0.2 62,-0.1 28,-0.1 0.831 95.5 39.5 -51.7 -27.9 -6.0 -0.7 -5.7 42 37 A G G < S+ 0 0 55 -3,-0.8 -1,-0.3 21,-0.1 2,-0.3 -0.012 110.0 77.3-110.8 30.3 -8.3 -2.6 -8.1 43 38 A R S < S- 0 0 111 -3,-2.9 21,-1.5 19,-0.1 2,-0.2 -0.842 82.2 -98.6-132.3 171.0 -6.8 -6.1 -7.6 44 39 A H B > -A 63 0A 78 -2,-0.3 3,-1.5 19,-0.2 19,-0.2 -0.591 50.1 -90.3 -89.2 152.5 -6.9 -8.9 -5.0 45 40 A S T 3 S+ 0 0 5 17,-1.4 -1,-0.1 1,-0.2 3,-0.1 -0.384 114.1 34.7 -61.4 131.6 -4.1 -9.3 -2.4 46 41 A G T 3 S+ 0 0 12 1,-0.3 2,-0.7 -2,-0.1 7,-0.4 0.425 85.0 121.0 104.7 -0.7 -1.4 -11.6 -3.8 47 42 A Q < + 0 0 86 -3,-1.5 2,-0.3 5,-0.1 -1,-0.3 -0.847 30.6 147.3-101.6 118.3 -1.7 -10.6 -7.5 48 43 A A - 0 0 36 -2,-0.7 4,-0.1 1,-0.1 -11,-0.1 -0.934 40.9-145.3-141.5 164.2 1.5 -9.2 -9.0 49 44 A E S S+ 0 0 125 -13,-0.3 3,-0.2 -2,-0.3 -1,-0.1 0.864 95.4 25.0 -99.1 -51.5 3.2 -9.2 -12.4 50 45 A G S S+ 0 0 50 1,-0.3 2,-0.5 -14,-0.2 -2,-0.1 0.978 133.7 14.8 -78.3 -69.4 6.9 -9.4 -11.7 51 46 A Y S S- 0 0 92 -22,-0.2 -1,-0.3 -15,-0.1 -2,-0.2 -0.917 75.2-137.2-112.4 125.2 7.1 -11.0 -8.2 52 47 A S - 0 0 58 -2,-0.5 -5,-0.1 -3,-0.2 3,-0.1 -0.424 35.5-100.3 -72.7 150.4 4.2 -12.8 -6.7 53 48 A Y - 0 0 20 -7,-0.4 -1,-0.1 1,-0.1 -5,-0.1 -0.047 57.6 -65.0 -63.0 174.4 3.6 -12.0 -3.0 54 49 A T > - 0 0 38 1,-0.1 4,-3.3 -3,-0.1 5,-0.3 -0.274 50.0-111.7 -60.5 147.1 4.8 -14.5 -0.4 55 50 A D H > S+ 0 0 133 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.884 119.9 54.8 -50.0 -37.7 2.9 -17.9 -0.5 56 51 A A H > S+ 0 0 41 26,-0.2 4,-1.4 2,-0.2 27,-0.3 0.980 112.0 41.0 -62.3 -52.4 1.3 -16.9 2.9 57 52 A N H 4 S+ 0 0 4 25,-0.6 3,-0.3 1,-0.2 -2,-0.2 0.928 114.1 53.8 -61.2 -42.7 -0.0 -13.6 1.5 58 53 A I H < S+ 0 0 54 -4,-3.3 -1,-0.2 1,-0.2 -2,-0.2 0.894 99.9 61.7 -61.3 -36.3 -1.0 -15.3 -1.8 59 54 A K H < S+ 0 0 167 -4,-2.4 2,-0.5 -5,-0.3 -1,-0.2 0.940 106.2 51.3 -56.1 -42.6 -3.0 -17.9 0.2 60 55 A K S < S+ 0 0 87 -4,-1.4 2,-0.4 -3,-0.3 -1,-0.1 -0.817 74.5 178.0 -96.9 128.6 -5.1 -15.0 1.5 61 56 A N + 0 0 96 -2,-0.5 2,-0.4 -15,-0.1 -15,-0.1 -0.983 4.7 173.7-134.7 127.9 -6.5 -12.7 -1.2 62 57 A V - 0 0 57 -2,-0.4 -17,-1.4 -19,-0.1 -19,-0.1 -0.993 38.6-104.6-133.8 137.9 -8.9 -9.7 -0.7 63 58 A L B -A 44 0A 90 -2,-0.4 2,-0.3 -19,-0.2 -19,-0.2 -0.249 40.7-128.4 -55.7 143.9 -10.1 -7.1 -3.3 64 59 A W + 0 0 18 -21,-1.5 2,-0.3 -24,-0.3 -1,-0.1 -0.761 35.6 161.9 -99.8 144.6 -8.3 -3.9 -2.8 65 60 A D > - 0 0 72 -2,-0.3 4,-3.9 1,-0.1 5,-0.4 -0.980 53.0-103.5-152.4 160.7 -10.1 -0.5 -2.4 66 61 A E H > S+ 0 0 35 -2,-0.3 4,-1.4 1,-0.2 -1,-0.1 0.925 126.6 42.8 -57.0 -39.3 -9.2 3.0 -1.1 67 62 A N H > S+ 0 0 56 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.938 116.9 45.9 -71.9 -45.1 -11.2 2.1 2.1 68 63 A N H > S+ 0 0 29 1,-0.2 4,-1.7 2,-0.2 3,-0.3 0.931 111.5 52.2 -64.3 -43.2 -9.7 -1.4 2.3 69 64 A M H X S+ 0 0 15 -4,-3.9 4,-2.8 1,-0.2 -1,-0.2 0.878 100.4 63.4 -62.4 -34.4 -6.2 -0.2 1.7 70 65 A S H X S+ 0 0 2 -4,-1.4 4,-1.4 -5,-0.4 -1,-0.2 0.936 104.1 47.1 -57.2 -42.8 -6.6 2.4 4.5 71 66 A E H X S+ 0 0 34 -4,-1.2 4,-1.0 -3,-0.3 -1,-0.2 0.912 110.8 52.5 -66.3 -38.9 -7.0 -0.5 7.0 72 67 A Y H >< S+ 0 0 36 -4,-1.7 3,-0.9 1,-0.2 -2,-0.2 0.933 101.6 59.3 -63.5 -43.6 -3.9 -2.3 5.6 73 68 A L H 3< S+ 0 0 27 -4,-2.8 17,-0.4 1,-0.3 3,-0.2 0.924 96.5 61.7 -52.9 -42.2 -1.7 0.8 5.9 74 69 A T H 3< S+ 0 0 48 -4,-1.4 2,-0.4 1,-0.2 -1,-0.3 0.916 125.3 14.0 -51.3 -39.7 -2.4 0.8 9.7 75 70 A N S X< S- 0 0 65 -4,-1.0 3,-0.7 -3,-0.9 -1,-0.2 -0.959 72.4-136.2-139.7 120.3 -0.7 -2.6 9.6 76 71 A H T 3 S+ 0 0 49 -2,-0.4 -3,-0.1 1,-0.3 -4,-0.1 0.634 108.5 26.2 -51.1 -4.6 1.4 -4.0 6.7 77 72 A A T 3 S+ 0 0 7 -5,-0.2 -1,-0.3 -4,-0.1 -5,-0.1 -0.448 74.4 133.3-160.1 80.9 -0.7 -7.2 7.5 78 73 A K S < S+ 0 0 91 -3,-0.7 -6,-0.1 2,-0.1 -2,-0.1 0.853 90.4 12.9 -95.0 -78.8 -4.1 -6.8 9.2 79 74 A Y S S+ 0 0 133 1,-0.3 3,-0.2 -4,-0.1 -7,-0.0 0.687 134.0 54.9 -71.9 -14.4 -6.6 -9.0 7.4 80 75 A I > + 0 0 2 1,-0.2 3,-2.0 2,-0.1 -1,-0.3 -0.555 61.5 161.2-117.9 67.9 -3.6 -10.6 5.7 81 76 A P T 3 S+ 0 0 79 0, 0.0 -1,-0.2 0, 0.0 -24,-0.1 0.836 71.3 70.6 -57.4 -31.5 -1.4 -11.8 8.6 82 77 A G T 3 S+ 0 0 28 -26,-0.2 -25,-0.6 -3,-0.2 -26,-0.2 0.821 83.1 93.7 -56.7 -24.7 0.4 -14.2 6.2 83 78 A T S < S- 0 0 18 -3,-2.0 2,-0.0 -27,-0.3 -28,-0.0 -0.409 84.9-118.1 -69.0 142.9 1.8 -10.9 4.8 84 79 A K - 0 0 143 -2,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.337 25.2-144.6 -77.1 164.3 5.2 -9.9 6.2 85 80 A M + 0 0 112 1,-0.1 -1,-0.0 -8,-0.1 -10,-0.0 -0.927 38.0 140.7-129.2 155.0 5.6 -6.6 8.1 86 81 A A + 0 0 101 -2,-0.3 2,-0.3 0, 0.0 -1,-0.1 0.271 32.7 122.8-179.3 24.4 8.5 -4.1 8.3 87 82 A F - 0 0 73 1,-0.1 -11,-0.1 0, 0.0 -2,-0.0 -0.777 63.1-126.0-101.0 144.5 7.1 -0.5 8.3 88 83 A G S S- 0 0 84 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.950 71.0 -70.2 -52.9 -50.8 8.0 1.9 11.2 89 84 A G > - 0 0 29 -3,-0.1 3,-0.7 3,-0.0 -1,-0.1 0.105 42.1-171.2 153.4 84.5 4.3 2.7 11.8 90 85 A L T 3 + 0 0 8 -17,-0.4 6,-0.4 1,-0.2 -15,-0.1 0.142 50.9 126.5 -79.0 25.8 2.0 4.7 9.4 91 86 A K T 3 + 0 0 139 -17,-0.2 -1,-0.2 4,-0.1 2,-0.2 0.841 42.4 100.0 -54.0 -30.2 -0.6 4.7 12.2 92 87 A K <> - 0 0 144 -3,-0.7 4,-2.0 1,-0.2 3,-0.3 -0.393 69.1-151.0 -59.9 121.4 -0.7 8.5 11.9 93 88 A E H > S+ 0 0 74 -2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.842 91.2 67.2 -65.0 -30.9 -3.8 9.2 9.8 94 89 A K H > S+ 0 0 167 2,-0.2 4,-1.9 1,-0.2 5,-0.3 0.947 107.4 37.7 -57.0 -46.9 -2.1 12.4 8.4 95 90 A D H > S+ 0 0 47 -3,-0.3 4,-2.9 2,-0.2 5,-0.2 0.962 119.3 47.5 -70.0 -49.4 0.5 10.3 6.5 96 91 A R H X S+ 0 0 13 -4,-2.0 4,-2.1 -6,-0.4 5,-0.3 0.901 111.9 52.1 -59.1 -39.9 -1.9 7.5 5.5 97 92 A N H X S+ 0 0 17 -4,-3.5 4,-1.8 -5,-0.2 -91,-0.2 0.980 115.9 37.2 -63.2 -55.2 -4.5 10.1 4.3 98 93 A D H X S+ 0 0 23 -4,-1.9 4,-1.6 -5,-0.3 5,-0.2 0.909 113.7 60.5 -64.6 -38.7 -2.2 12.1 2.1 99 94 A L H >X S+ 0 0 7 -4,-2.9 4,-1.8 -5,-0.3 3,-0.9 0.977 111.0 36.6 -52.2 -63.3 -0.4 8.8 1.0 100 95 A I H 3X S+ 0 0 0 -4,-2.1 4,-4.0 1,-0.2 5,-0.5 0.840 105.3 71.7 -62.5 -30.0 -3.5 7.2 -0.5 101 96 A T H 3X S+ 0 0 33 -4,-1.8 4,-1.4 -5,-0.3 -1,-0.2 0.924 105.4 39.5 -53.1 -40.7 -4.7 10.6 -1.7 102 97 A Y H