==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 22-APR-02 1LJO . COMPND 2 MOLECULE: ARCHAEAL SM-LIKE PROTEIN AF-SM2; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR I.TORO,J.BASQUIN,H.TEO-DREHER,D.SUCK . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5162.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 70.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 34 45.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 143 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-110.1 21.6 19.6 41.8 2 2 A A - 0 0 108 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.953 360.0-176.1-145.5 162.5 18.0 20.2 41.1 3 3 A M - 0 0 161 -2,-0.3 2,-0.6 2,-0.0 0, 0.0 -0.987 27.6-115.8-157.8 158.5 15.3 19.2 38.6 4 4 A V - 0 0 103 -2,-0.3 5,-0.0 4,-0.0 -2,-0.0 -0.893 32.9-128.8-103.3 119.6 11.7 19.8 37.7 5 5 A L > - 0 0 90 -2,-0.6 4,-2.4 1,-0.1 3,-0.3 -0.367 14.8-126.1 -66.1 140.2 9.4 16.8 38.0 6 6 A P H > S+ 0 0 90 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.925 112.5 50.9 -52.5 -47.5 7.2 16.1 34.9 7 7 A N H > S+ 0 0 68 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.857 109.1 52.4 -59.6 -34.8 4.0 16.1 37.0 8 8 A Q H > S+ 0 0 105 -3,-0.3 4,-1.6 2,-0.2 -1,-0.2 0.918 110.4 48.1 -66.1 -43.5 5.1 19.5 38.4 9 9 A M H X S+ 0 0 85 -4,-2.4 4,-0.6 1,-0.2 -2,-0.2 0.944 111.5 48.8 -62.6 -48.5 5.6 20.8 34.9 10 10 A V H >< S+ 0 0 8 -4,-2.8 3,-1.2 1,-0.2 4,-0.2 0.892 109.1 52.7 -60.8 -40.3 2.2 19.6 33.6 11 11 A K H >< S+ 0 0 142 -4,-2.1 3,-1.7 1,-0.3 -1,-0.2 0.861 101.8 60.1 -64.9 -32.9 0.4 21.0 36.6 12 12 A S H 3< S+ 0 0 67 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.685 96.7 63.1 -67.4 -16.0 2.0 24.4 35.9 13 13 A M T X< S+ 0 0 13 -3,-1.2 3,-2.1 -4,-0.6 20,-0.4 0.507 74.9 120.7 -85.4 -5.8 0.3 24.3 32.5 14 14 A V T < S+ 0 0 60 -3,-1.7 20,-0.2 1,-0.3 3,-0.1 -0.347 76.3 22.4 -61.3 136.3 -3.2 24.3 34.1 15 15 A G T 3 S+ 0 0 42 18,-3.6 -1,-0.3 1,-0.3 2,-0.2 0.346 111.9 93.9 88.4 -7.1 -5.2 27.3 32.9 16 16 A K S < S- 0 0 142 -3,-2.1 17,-2.7 17,-0.3 2,-0.4 -0.718 83.2 -94.3-116.8 167.7 -3.1 27.6 29.8 17 17 A I E +A 32 0A 80 -2,-0.2 58,-3.1 15,-0.2 2,-0.3 -0.656 45.3 178.0 -82.9 130.3 -3.3 26.4 26.2 18 18 A I E -AB 31 74A 0 13,-2.5 13,-1.9 -2,-0.4 2,-0.4 -0.887 24.9-136.4-131.0 161.2 -1.4 23.1 25.4 19 19 A R E -AB 30 73A 23 54,-2.8 54,-2.6 -2,-0.3 2,-0.4 -0.974 24.0-166.3-118.2 131.4 -0.9 20.9 22.4 20 20 A V E -AB 29 72A 0 9,-3.1 9,-2.5 -2,-0.4 2,-0.6 -0.969 14.2-156.2-126.2 133.5 -1.2 17.1 22.9 21 21 A E E - B 0 71A 91 50,-2.5 49,-3.1 -2,-0.4 50,-1.4 -0.926 18.8-159.0-106.2 124.1 -0.1 14.2 20.8 22 22 A M E > - B 0 69A 19 -2,-0.6 3,-1.3 5,-0.4 47,-0.2 -0.791 21.5-132.5-104.4 147.5 -2.1 11.0 21.5 23 23 A K T 3 S+ 0 0 142 45,-3.2 -1,-0.1 -2,-0.3 46,-0.1 0.905 109.1 43.0 -62.5 -43.5 -1.0 7.4 20.7 24 24 A G T 3 S+ 0 0 74 44,-0.3 2,-0.3 -3,-0.0 -1,-0.3 -0.070 106.5 77.3 -95.7 35.4 -4.4 6.5 19.2 25 25 A E < - 0 0 66 -3,-1.3 -3,-0.2 1,-0.1 4,-0.1 -0.990 55.6-163.1-145.9 133.0 -4.8 9.8 17.3 26 26 A E S S+ 0 0 160 -2,-0.3 2,-0.3 -5,-0.1 -1,-0.1 0.731 80.9 56.3 -86.5 -24.1 -3.3 11.0 14.1 27 27 A N S S- 0 0 11 24,-0.1 -5,-0.4 1,-0.0 24,-0.2 -0.787 88.7-113.9-106.8 152.8 -4.1 14.7 14.7 28 28 A Q E - C 0 50A 44 22,-2.2 22,-3.3 -2,-0.3 2,-0.4 -0.445 20.8-129.2 -84.0 159.3 -3.0 16.7 17.7 29 29 A L E -AC 20 49A 5 -9,-2.5 -9,-3.1 20,-0.2 2,-0.4 -0.917 21.8-172.6-109.5 133.2 -5.4 18.1 20.3 30 30 A V E +AC 19 48A 12 18,-2.6 18,-2.3 -2,-0.4 2,-0.3 -0.994 27.9 111.9-127.2 128.1 -5.1 21.8 21.3 31 31 A G E -A 18 0A 4 -13,-1.9 -13,-2.5 -2,-0.4 2,-0.5 -0.983 65.5 -62.0-174.7 179.9 -7.1 23.3 24.2 32 32 A K E -AC 17 45A 68 13,-2.5 13,-2.0 -2,-0.3 2,-0.9 -0.698 46.5-129.0 -84.6 127.1 -7.1 24.8 27.6 33 33 A L E + C 0 44A 0 -17,-2.7 -18,-3.6 -2,-0.5 -17,-0.3 -0.662 36.5 166.2 -78.5 107.4 -5.8 22.5 30.3 34 34 A E E + 0 0 80 9,-2.8 2,-0.3 -2,-0.9 10,-0.2 0.653 63.0 0.4 -94.9 -20.9 -8.6 22.6 33.0 35 35 A G E + C 0 43A 23 8,-1.4 8,-2.8 2,-0.0 -1,-0.3 -0.969 54.2 176.3-168.2 151.9 -7.4 19.6 35.0 36 36 A V E - C 0 42A 46 -2,-0.3 2,-0.2 6,-0.2 6,-0.2 -0.979 11.1-156.5-154.3 154.1 -4.8 16.8 35.3 37 37 A D > - 0 0 67 4,-1.2 3,-2.1 -2,-0.3 -2,-0.0 -0.725 42.6 -86.1-126.4-179.8 -3.9 14.0 37.7 38 38 A D T 3 S+ 0 0 127 1,-0.3 -31,-0.1 -2,-0.2 0, 0.0 0.683 126.3 55.8 -62.8 -19.3 -0.9 12.0 38.6 39 39 A Y T 3 S- 0 0 179 2,-0.1 -1,-0.3 -32,-0.0 3,-0.1 0.334 117.6-115.0 -93.2 7.7 -1.5 9.5 35.8 40 40 A M < + 0 0 50 -3,-2.1 2,-0.2 1,-0.2 -2,-0.1 0.765 57.2 161.5 64.5 27.8 -1.5 12.4 33.4 41 41 A N - 0 0 37 24,-0.1 -4,-1.2 25,-0.1 2,-0.4 -0.563 29.0-146.8 -69.5 146.7 -5.1 12.1 32.5 42 42 A L E -CD 36 64A 1 22,-2.5 22,-3.3 -6,-0.2 2,-0.6 -0.967 19.8-161.2-127.1 140.2 -6.0 15.4 30.9 43 43 A Y E -CD 35 63A 81 -8,-2.8 -9,-2.8 -2,-0.4 -8,-1.4 -0.959 19.6-177.8-118.4 111.2 -9.2 17.5 30.9 44 44 A L E -CD 33 62A 0 18,-2.5 18,-2.4 -2,-0.6 2,-0.3 -0.829 8.7-162.5-109.4 148.0 -9.2 20.1 28.2 45 45 A T E S+C 32 0A 14 -13,-2.0 -13,-2.5 -2,-0.3 16,-0.2 -0.878 74.5 21.8-124.4 158.0 -11.9 22.7 27.4 46 46 A N E S+ 0 0 121 -2,-0.3 15,-0.2 -15,-0.2 -1,-0.2 0.819 92.8 171.0 54.9 32.8 -12.5 24.7 24.3 47 47 A A E - D 0 60A 4 13,-2.5 12,-2.7 -3,-0.2 13,-2.3 -0.305 19.4-173.9 -78.0 157.3 -10.5 22.0 22.5 48 48 A M E -CD 30 58A 65 -18,-2.3 -18,-2.6 10,-0.2 2,-0.5 -0.978 27.6-117.2-146.5 155.5 -9.9 21.4 18.8 49 49 A E E +CD 29 57A 12 8,-3.3 7,-3.0 -2,-0.3 8,-1.5 -0.840 43.4 178.8 -95.4 129.3 -8.3 18.8 16.6 50 50 A C E -CD 28 55A 6 -22,-3.3 -22,-2.2 -2,-0.5 2,-0.3 -0.896 36.7-152.8-133.1 161.6 -5.3 20.3 14.7 51 51 A K E > S- D 0 54A 116 3,-2.6 3,-1.1 -2,-0.3 2,-0.4 -0.777 81.0 -56.6-129.2 79.5 -2.6 19.3 12.3 52 52 A G T 3 S- 0 0 28 -2,-0.3 -1,-0.0 1,-0.2 -24,-0.0 -0.695 122.5 -15.6 81.3-129.4 0.0 21.8 13.1 53 53 A E T 3 S+ 0 0 157 -2,-0.4 2,-0.6 -3,-0.1 -1,-0.2 0.391 118.1 102.2 -88.7 5.0 -1.5 25.3 12.8 54 54 A E E < -D 51 0A 137 -3,-1.1 -3,-2.6 2,-0.0 2,-0.4 -0.810 64.3-146.3 -97.2 118.8 -4.4 23.8 10.8 55 55 A K E +D 50 0A 97 -2,-0.6 -5,-0.2 -5,-0.2 3,-0.1 -0.645 25.6 165.2 -81.2 130.6 -7.7 23.3 12.6 56 56 A V E + 0 0 66 -7,-3.0 2,-0.3 -2,-0.4 -6,-0.2 0.652 62.0 15.0-118.3 -26.7 -9.7 20.3 11.4 57 57 A R E -D 49 0A 145 -8,-1.5 -8,-3.3 0, 0.0 2,-0.4 -0.981 60.4-134.6-153.7 139.9 -12.4 19.8 14.1 58 58 A S E +D 48 0A 96 -2,-0.3 -10,-0.2 -10,-0.2 -11,-0.1 -0.791 29.1 166.9 -91.3 134.8 -14.0 21.6 17.0 59 59 A L E - 0 0 65 -12,-2.7 2,-0.5 -2,-0.4 -11,-0.2 0.705 13.5-169.5-119.6 -35.3 -14.3 19.4 20.1 60 60 A G E +D 47 0A 30 -13,-2.3 -13,-2.5 -15,-0.1 2,-0.4 -0.649 65.7 20.0 80.2-125.6 -15.1 21.6 23.1 61 61 A E E S+ 0 0 143 -2,-0.5 2,-0.3 -16,-0.2 -16,-0.2 -0.672 75.8 160.4 -84.1 127.4 -14.8 19.6 26.4 62 62 A I E -D 44 0A 35 -18,-2.4 -18,-2.5 -2,-0.4 2,-0.5 -0.995 31.2-144.5-146.1 152.2 -12.7 16.4 26.2 63 63 A V E -D 43 0A 109 -2,-0.3 2,-0.4 -20,-0.2 -20,-0.2 -0.974 16.5-154.7-118.2 124.9 -10.9 14.0 28.6 64 64 A L E -D 42 0A 17 -22,-3.3 -22,-2.5 -2,-0.5 2,-0.4 -0.854 19.5-121.9-102.7 132.4 -7.6 12.4 27.4 65 65 A R > - 0 0 128 -2,-0.4 3,-1.8 -24,-0.2 4,-0.3 -0.593 18.8-138.8 -74.5 123.1 -6.5 9.1 28.9 66 66 A G G > S+ 0 0 8 -2,-0.4 3,-1.6 1,-0.3 -1,-0.1 0.828 97.0 55.4 -51.1 -44.6 -3.1 9.5 30.5 67 67 A N G 3 S+ 0 0 94 1,-0.3 -1,-0.3 -44,-0.0 -27,-0.1 0.612 109.0 50.8 -71.4 -6.0 -1.4 6.2 29.3 68 68 A N G < S+ 0 0 56 -3,-1.8 -45,-3.2 -45,-0.1 2,-0.4 0.346 83.9 106.6-108.4 5.2 -2.3 7.2 25.7 69 69 A V E < +B 22 0A 22 -3,-1.6 -47,-0.2 -4,-0.3 3,-0.1 -0.675 42.1 177.1 -80.9 134.3 -0.8 10.6 25.9 70 70 A V E + 0 0 86 -49,-3.1 2,-0.3 1,-0.4 -48,-0.2 0.821 61.6 1.5-103.1 -53.2 2.5 10.7 24.0 71 71 A L E -B 21 0A 89 -50,-1.4 -50,-2.5 2,-0.0 2,-0.4 -0.997 54.3-161.1-142.9 141.8 3.7 14.3 24.2 72 72 A I E -B 20 0A 32 -2,-0.3 -52,-0.2 -52,-0.2 -54,-0.0 -0.986 13.2-178.9-123.8 132.3 2.5 17.5 25.9 73 73 A Q E -B 19 0A 95 -54,-2.6 -54,-2.8 -2,-0.4 -2,-0.0 -0.988 30.2-120.3-136.4 126.4 3.7 21.0 24.8 74 74 A P E B 18 0A 66 0, 0.0 -56,-0.3 0, 0.0 -64,-0.0 -0.359 360.0 360.0 -59.2 142.7 2.7 24.4 26.1 75 75 A Q 0 0 106 -58,-3.1 -58,-0.2 -44,-0.1 -45,-0.0 -0.600 360.0 360.0 -96.2 360.0 1.2 26.4 23.3