==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 30-SEP-11 2LK1 . COMPND 2 MOLECULE: RNA-BINDING PROTEIN 5; . SOURCE 2 SYNTHETIC: YES; . AUTHOR B.FARINA,M.PELLECCHIA . 30 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2967.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 36.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 184 0, 0.0 2,-1.2 0, 0.0 15,-0.0 0.000 360.0 360.0 360.0 88.5 -1.3 13.9 0.5 2 2 A F + 0 0 154 14,-0.1 2,-2.1 1,-0.1 0, 0.0 -0.441 360.0 162.2 -88.0 61.0 -1.4 10.6 2.4 3 3 A E - 0 0 128 -2,-1.2 -1,-0.1 12,-0.1 0, 0.0 -0.566 28.9-158.6 -75.9 80.1 -3.7 9.0 -0.2 4 4 A D - 0 0 46 -2,-2.1 2,-0.3 1,-0.1 11,-0.2 -0.065 2.3-136.4 -58.5 166.9 -2.9 5.5 1.2 5 5 A W E -A 14 0A 26 9,-2.4 9,-2.6 10,-0.1 2,-0.5 -0.875 6.4-122.8-130.1 160.4 -3.4 2.5 -1.1 6 6 A L E -A 13 0A 104 -2,-0.3 7,-0.2 7,-0.2 5,-0.1 -0.909 28.9-124.2-109.0 121.4 -4.9 -0.9 -0.7 7 7 A C - 0 0 4 5,-1.8 4,-0.3 -2,-0.5 21,-0.1 -0.273 7.4-145.6 -62.0 151.0 -2.7 -3.9 -1.6 8 8 A N S S+ 0 0 161 22,-0.2 -1,-0.1 20,-0.1 -2,-0.0 -0.141 94.6 48.4-105.5 35.2 -4.1 -6.3 -4.1 9 9 A K S S+ 0 0 158 3,-0.1 -1,-0.1 17,-0.1 -2,-0.0 0.542 128.9 11.4-138.2 -59.3 -2.5 -9.3 -2.4 10 10 A C S S- 0 0 26 2,-0.1 -2,-0.1 0, 0.0 -3,-0.1 0.315 92.3-127.2-108.1 5.9 -3.3 -9.1 1.3 11 11 A C + 0 0 95 -4,-0.3 2,-0.5 1,-0.2 -3,-0.1 0.764 57.2 146.2 62.8 27.4 -5.9 -6.3 1.1 12 12 A L - 0 0 59 1,-0.0 -5,-1.8 0, 0.0 2,-0.6 -0.870 54.0-121.6-103.1 129.9 -4.2 -4.1 3.8 13 13 A N E -A 6 0A 86 -2,-0.5 2,-0.3 -7,-0.2 -7,-0.2 -0.585 38.1-173.2 -63.7 111.5 -4.3 -0.3 3.5 14 14 A N E -A 5 0A 7 -9,-2.6 -9,-2.4 -2,-0.6 7,-0.1 -0.827 29.1 -92.5-110.6 151.3 -0.5 0.8 3.3 15 15 A F - 0 0 114 -2,-0.3 -1,-0.1 -11,-0.2 -10,-0.1 -0.047 25.9-125.4 -57.0 159.7 0.8 4.3 3.4 16 16 A R S S+ 0 0 123 1,-0.2 -1,-0.1 -12,-0.1 -14,-0.1 0.912 110.0 60.8 -71.3 -42.6 1.4 6.3 0.2 17 17 A K S S+ 0 0 148 2,-0.1 2,-0.7 1,-0.0 -1,-0.2 0.854 91.7 81.8 -50.5 -35.5 5.0 7.0 1.2 18 18 A R - 0 0 121 1,-0.2 4,-0.1 4,-0.0 -4,-0.1 -0.634 60.3-172.4 -75.6 113.4 5.5 3.2 1.2 19 19 A L S S+ 0 0 131 -2,-0.7 9,-1.0 2,-0.1 2,-0.2 0.835 75.0 50.1 -67.7 -33.0 6.0 2.1 -2.4 20 20 A K B S-B 27 0B 125 7,-0.2 7,-0.2 1,-0.1 6,-0.1 -0.668 98.4 -95.4-107.7 162.6 5.8 -1.5 -1.1 21 21 A C - 0 0 8 5,-1.1 4,-0.3 -2,-0.2 -1,-0.1 -0.378 23.6-137.9 -71.5 154.1 3.2 -3.3 1.1 22 22 A F S S+ 0 0 161 -10,-0.1 -1,-0.1 2,-0.1 -9,-0.0 -0.289 97.6 36.0-107.0 46.2 4.1 -3.4 4.8 23 23 A R S S+ 0 0 177 3,-0.1 -1,-0.1 -11,-0.1 -2,-0.0 0.246 132.3 17.1-152.1 -59.5 2.9 -7.0 5.2 24 24 A C S S- 0 0 57 2,-0.1 -2,-0.1 3,-0.0 3,-0.1 0.348 89.3-130.5-102.4 4.7 3.7 -9.1 2.0 25 25 A G + 0 0 34 -4,-0.3 2,-0.4 1,-0.2 -3,-0.1 0.580 57.3 145.5 63.4 7.0 6.3 -6.6 0.6 26 26 A A - 0 0 16 -6,-0.1 -5,-1.1 1,-0.1 -1,-0.2 -0.669 49.7-121.1 -85.5 132.6 4.6 -6.8 -2.8 27 27 A D B > -B 20 0B 53 -2,-0.4 3,-1.8 -7,-0.2 -7,-0.2 -0.202 27.6-104.6 -63.5 161.6 4.6 -3.5 -4.8 28 28 A K T 3 S+ 0 0 109 -9,-1.0 -20,-0.1 1,-0.3 -1,-0.1 0.818 125.6 43.4 -52.7 -33.5 1.3 -1.9 -5.8 29 29 A F T 3 0 0 202 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 -0.224 360.0 360.0-108.8 42.6 2.0 -3.2 -9.3 30 30 A D < 0 0 150 -3,-1.8 -22,-0.2 -4,-0.1 -4,-0.0 -0.978 360.0 360.0-154.8 360.0 3.2 -6.7 -8.3