==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 19-OCT-11 2LKS . COMPND 2 MOLECULE: PRE-MRNA-PROCESSING FACTOR 40 HOMOLOG A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.BARETTE,A.VELYVIS,T.L.RELIGA,D.M.KORZHNEV,L.E.KAY . 44 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4285.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A T >> 0 0 144 0, 0.0 3,-2.6 0, 0.0 4,-0.6 0.000 360.0 360.0 360.0-100.6 -10.8 12.5 -1.6 2 14 A K H 3> + 0 0 128 1,-0.3 4,-1.6 2,-0.2 5,-0.1 0.614 360.0 81.9 -53.4 -8.5 -8.4 10.2 -3.3 3 15 A E H 3> S+ 0 0 103 1,-0.2 4,-1.8 2,-0.2 -1,-0.3 0.867 85.2 54.2 -66.0 -36.6 -5.8 12.5 -1.7 4 16 A E H <> S+ 0 0 145 -3,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.887 105.7 52.5 -64.8 -39.4 -6.2 10.6 1.6 5 17 A A H X S+ 0 0 55 -4,-0.6 4,-1.5 1,-0.2 -1,-0.2 0.884 107.1 52.8 -64.1 -38.7 -5.4 7.3 -0.2 6 18 A K H X S+ 0 0 98 -4,-1.6 4,-1.7 1,-0.2 -1,-0.2 0.895 106.5 52.8 -63.8 -40.8 -2.2 8.8 -1.7 7 19 A Q H X S+ 0 0 110 -4,-1.8 4,-2.6 1,-0.2 -1,-0.2 0.880 104.3 56.6 -62.7 -38.4 -1.1 9.9 1.8 8 20 A A H X S+ 0 0 43 -4,-1.7 4,-2.7 1,-0.2 -1,-0.2 0.890 104.3 53.2 -60.8 -39.7 -1.5 6.3 3.1 9 21 A F H X S+ 0 0 82 -4,-1.5 4,-2.0 2,-0.2 -1,-0.2 0.931 111.1 45.2 -61.4 -46.8 0.8 5.0 0.4 10 22 A K H X S+ 0 0 136 -4,-1.7 4,-1.8 1,-0.2 -2,-0.2 0.910 115.4 47.2 -63.8 -42.8 3.6 7.5 1.3 11 23 A E H X S+ 0 0 123 -4,-2.6 4,-2.5 1,-0.2 -2,-0.2 0.866 108.6 55.9 -66.7 -36.6 3.1 6.7 5.0 12 24 A L H X S+ 0 0 20 -4,-2.7 4,-2.0 -5,-0.2 -1,-0.2 0.912 107.2 48.6 -62.2 -43.6 3.1 3.0 4.4 13 25 A L H < S+ 0 0 36 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.907 112.0 49.0 -63.5 -42.2 6.5 3.2 2.7 14 26 A K H < S+ 0 0 178 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.892 109.9 51.6 -64.3 -40.7 7.9 5.2 5.5 15 27 A E H < S+ 0 0 136 -4,-2.5 2,-0.3 -5,-0.1 -1,-0.2 0.881 109.3 58.4 -64.1 -38.6 6.5 2.8 8.1 16 28 A K S < S- 0 0 34 -4,-2.0 2,-0.2 -5,-0.2 15,-0.0 -0.684 93.8-110.8 -95.0 147.8 8.1 -0.1 6.2 17 29 A R - 0 0 206 -2,-0.3 -2,-0.1 1,-0.1 -3,-0.1 -0.487 25.5-170.0 -76.4 145.0 11.8 -0.4 5.5 18 30 A V - 0 0 75 -2,-0.2 -1,-0.1 -4,-0.1 9,-0.0 -0.577 12.4-155.6-136.1 72.1 13.1 -0.0 2.0 19 31 A P - 0 0 78 0, 0.0 3,-0.4 0, 0.0 8,-0.1 -0.107 20.4-128.4 -48.5 140.1 16.8 -1.0 1.7 20 32 A S S S+ 0 0 119 1,-0.2 0, 0.0 3,-0.0 0, 0.0 0.830 108.8 61.7 -61.7 -32.2 18.6 0.5 -1.2 21 33 A N S S+ 0 0 155 2,-0.1 -1,-0.2 0, 0.0 -3,-0.0 0.892 98.0 67.1 -61.6 -40.2 19.9 -2.9 -2.1 22 34 A A S S- 0 0 29 -3,-0.4 2,-0.3 1,-0.1 3,-0.1 0.441 85.3-122.8 -58.1-151.0 16.3 -4.1 -2.7 23 35 A S > - 0 0 43 1,-0.1 4,-2.8 0, 0.0 5,-0.2 -0.986 19.2-105.9-158.4 161.0 14.2 -2.7 -5.5 24 36 A W H > S+ 0 0 149 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 0.893 120.1 54.5 -57.4 -41.2 10.9 -0.8 -6.2 25 37 A E H > S+ 0 0 139 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.923 111.6 43.6 -59.9 -45.2 9.4 -4.1 -7.6 26 38 A Q H > S+ 0 0 106 1,-0.2 4,-1.6 2,-0.2 -2,-0.2 0.896 112.4 53.0 -67.1 -40.8 10.3 -5.9 -4.4 27 39 A A H X S+ 0 0 5 -4,-2.8 4,-1.4 1,-0.2 -2,-0.2 0.881 107.5 52.1 -62.5 -38.3 9.1 -3.0 -2.2 28 40 A M H X S+ 0 0 80 -4,-2.5 4,-1.5 1,-0.2 -1,-0.2 0.888 108.0 51.1 -65.3 -39.5 5.7 -3.0 -4.1 29 41 A K H X S+ 0 0 129 -4,-1.6 4,-2.1 1,-0.2 -1,-0.2 0.814 103.0 61.3 -66.9 -31.5 5.3 -6.8 -3.4 30 42 A M H X S+ 0 0 87 -4,-1.6 4,-1.2 1,-0.2 -1,-0.2 0.921 108.2 41.1 -62.5 -44.7 6.0 -6.2 0.3 31 43 A I H < S+ 0 0 23 -4,-1.4 6,-0.4 1,-0.2 -1,-0.2 0.809 110.6 59.5 -73.1 -30.0 3.0 -3.9 0.7 32 44 A I H < S+ 0 0 66 -4,-1.5 -2,-0.2 1,-0.2 6,-0.2 0.903 102.0 52.5 -64.4 -42.5 0.9 -6.2 -1.5 33 45 A N H < S+ 0 0 133 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.2 0.893 87.0 99.5 -60.8 -40.5 1.4 -9.1 0.8 34 46 A D S >X S- 0 0 50 -4,-1.2 3,-3.0 1,-0.2 4,-0.5 -0.225 84.3-126.7 -49.5 127.5 0.2 -7.0 3.8 35 47 A P H >> S+ 0 0 100 0, 0.0 4,-1.3 0, 0.0 3,-0.7 0.787 107.9 71.6 -47.5 -30.3 -3.5 -7.9 4.5 36 48 A R H 3> S+ 0 0 101 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.809 86.2 66.1 -58.1 -29.8 -4.1 -4.2 4.2 37 49 A Y H <> S+ 0 0 114 -3,-3.0 4,-2.1 -6,-0.4 -1,-0.2 0.920 98.4 50.6 -58.6 -45.4 -3.5 -4.5 0.5 38 50 A S H