==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 07-NOV-11 2LLD . COMPND 2 MOLECULE: LUCIFENSIN; . SOURCE 2 ORGANISM_SCIENTIFIC: LUCILIA SERICATA; . AUTHOR M.K.E.NYGAARD,A.S.ANDERSEN,H.KRISTENSEN,K.A.KROGFELT,P.FOJAN . 40 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3099.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 55.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 15.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 83 0, 0.0 35,-2.6 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0-177.4 2.2 -0.3 -7.4 2 2 A T B -A 35 0A 64 33,-0.3 33,-0.2 2,-0.1 32,-0.1 -0.787 360.0-154.2-119.1 161.3 2.4 -3.0 -4.7 3 3 A a + 0 0 6 31,-2.8 13,-0.2 -2,-0.3 32,-0.2 0.275 61.1 123.2-107.0 -0.9 0.0 -4.4 -2.0 4 4 A D - 0 0 83 30,-0.6 3,-0.3 1,-0.1 -2,-0.1 -0.257 61.5-145.6 -65.3 154.4 3.0 -5.6 0.0 5 5 A L > + 0 0 73 1,-0.2 3,-1.0 6,-0.1 6,-0.1 -0.334 61.3 127.1-109.4 44.9 3.8 -4.7 3.6 6 6 A L T 3 + 0 0 153 1,-0.3 -1,-0.2 4,-0.1 3,-0.1 0.793 65.2 60.2 -71.4 -29.5 7.5 -4.9 2.7 7 7 A S T 3 S- 0 0 112 -3,-0.3 2,-0.8 2,-0.3 -1,-0.3 0.208 116.1-109.1 -83.7 11.4 8.0 -1.4 4.1 8 8 A G S < S+ 0 0 43 -3,-1.0 -1,-0.2 2,-0.1 0, 0.0 -0.860 94.3 52.9 96.2-120.1 6.9 -2.3 7.5 9 9 A T S S+ 0 0 130 -2,-0.8 -2,-0.3 1,-0.2 0, 0.0 0.064 74.6 76.4 -49.0 159.6 3.6 -0.6 8.0 10 10 A G + 0 0 18 -5,-0.1 5,-0.3 -4,-0.1 -1,-0.2 0.529 50.6 145.7 102.1 15.1 0.7 -1.1 5.6 11 11 A V + 0 0 98 -6,-0.1 2,-0.8 2,-0.1 -6,-0.1 0.862 56.9 76.5 -53.5 -36.8 0.1 -4.6 7.1 12 12 A K S > S- 0 0 175 1,-0.2 3,-2.3 2,-0.0 4,-0.1 -0.688 88.8-140.2 -74.1 112.9 -3.6 -3.9 6.4 13 13 A H T > S+ 0 0 99 -2,-0.8 3,-1.9 1,-0.3 4,-0.5 0.607 92.0 86.3 -59.1 -8.0 -3.6 -4.5 2.6 14 14 A S T 3> + 0 0 84 1,-0.3 4,-2.1 2,-0.2 3,-0.3 0.675 67.1 86.4 -62.7 -13.8 -6.0 -1.6 2.3 15 15 A A H <> S+ 0 0 39 -3,-2.3 4,-2.4 -5,-0.3 -1,-0.3 0.804 79.8 60.1 -56.6 -31.3 -2.8 0.4 2.2 16 16 A b H <> S+ 0 0 3 -3,-1.9 4,-1.6 2,-0.2 -1,-0.2 0.944 105.3 46.5 -63.0 -45.5 -2.7 -0.3 -1.6 17 17 A A H > S+ 0 0 29 -4,-0.5 4,-2.3 -3,-0.3 -2,-0.2 0.913 113.0 50.3 -63.2 -41.4 -6.0 1.5 -2.0 18 18 A A H X S+ 0 0 44 -4,-2.1 4,-2.4 1,-0.2 -1,-0.2 0.879 104.3 57.6 -65.1 -38.1 -4.7 4.3 0.2 19 19 A H H < S+ 0 0 109 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.876 110.1 44.9 -61.8 -36.0 -1.5 4.6 -1.9 20 20 A c H ><>S+ 0 0 0 -4,-1.6 3,-2.0 2,-0.2 5,-1.9 0.913 109.3 54.8 -72.9 -42.0 -3.7 5.2 -4.9 21 21 A L H ><5S+ 0 0 101 -4,-2.3 3,-2.1 1,-0.3 -2,-0.2 0.877 99.2 63.6 -59.1 -35.4 -5.9 7.7 -3.1 22 22 A L T 3<5S+ 0 0 152 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.574 101.1 52.0 -66.6 -8.3 -2.8 9.6 -2.1 23 23 A R T < 5S- 0 0 167 -3,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 0.228 125.9-100.6-107.3 7.6 -2.2 10.3 -5.9 24 24 A G T < 5S+ 0 0 45 -3,-2.1 -3,-0.2 1,-0.3 -2,-0.1 0.539 79.8 138.6 83.4 7.4 -5.8 11.6 -6.4 25 25 A N < - 0 0 24 -5,-1.9 -1,-0.3 -6,-0.1 15,-0.2 -0.454 69.9-109.9 -79.0 161.5 -7.0 8.3 -7.8 26 26 A R S S- 0 0 156 1,-0.2 2,-0.3 -2,-0.1 -5,-0.1 0.599 73.3 -86.0 -66.3 -12.5 -10.4 6.9 -6.8 27 27 A G - 0 0 3 12,-0.3 12,-3.2 -7,-0.1 2,-0.3 -0.875 46.5-111.8 136.8-165.0 -8.5 4.2 -4.9 28 28 A G E -B 38 0B 7 10,-0.3 2,-0.3 -2,-0.3 10,-0.3 -0.941 9.6-140.7-156.0 173.5 -7.1 0.8 -5.8 29 29 A Y E -B 37 0B 115 8,-1.9 8,-3.0 -2,-0.3 2,-0.5 -0.932 23.8-114.6-137.0 161.0 -7.4 -3.0 -5.4 30 30 A a E -B 36 0B 51 -2,-0.3 6,-0.2 6,-0.2 2,-0.2 -0.853 18.7-144.0-102.3 135.1 -4.9 -5.8 -4.9 31 31 A N > - 0 0 64 4,-3.1 3,-1.6 -2,-0.5 4,-0.3 -0.493 37.1-100.7 -81.4 163.4 -4.4 -8.6 -7.4 32 32 A G T 3 S+ 0 0 92 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 0.460 121.7 62.9 -67.0 1.4 -3.6 -12.1 -6.1 33 33 A R T 3 S- 0 0 220 2,-0.2 -1,-0.3 0, 0.0 3,-0.1 0.009 122.0-102.9-111.9 22.6 0.1 -11.5 -6.9 34 34 A A S < S+ 0 0 31 -3,-1.6 -31,-2.8 1,-0.3 -30,-0.6 0.673 77.2 142.2 62.5 25.7 0.3 -8.6 -4.4 35 35 A I B -A 2 0A 82 -4,-0.3 -4,-3.1 -33,-0.2 2,-0.5 -0.739 46.1-138.4 -93.1 141.3 0.2 -6.1 -7.2 36 36 A b E -B 30 0B 5 -35,-2.6 2,-0.6 -2,-0.4 -6,-0.2 -0.893 13.3-163.8-105.0 128.6 -1.8 -2.9 -6.6 37 37 A V E -B 29 0B 44 -8,-3.0 -8,-1.9 -2,-0.5 2,-0.1 -0.938 10.1-152.3-119.5 104.4 -4.0 -1.7 -9.4 38 38 A c E -B 28 0B 35 -2,-0.6 -10,-0.3 -10,-0.3 2,-0.1 -0.449 10.4-131.1 -71.7 151.0 -5.2 1.9 -8.9 39 39 A R 0 0 127 -12,-3.2 -12,-0.3 -2,-0.1 -1,-0.1 -0.379 360.0 360.0 -86.0 175.0 -8.4 3.1 -10.4 40 40 A N 0 0 133 -15,-0.2 -1,-0.1 -2,-0.1 -2,-0.1 0.803 360.0 360.0 -57.4 360.0 -8.4 6.4 -12.4