==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL CYCLE, TRANSCRIPTION 10-NOV-11 2LLK . COMPND 2 MOLECULE: CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.MONTECCHIO,A.LEMAK,A.YEE,C.XU,M.GARCIA,S.HOULISTON,J.MIN, . 55 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4919.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 47.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 220 A D 0 0 188 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 126.7 4.1 -0.7 -1.4 2 221 A R + 0 0 219 3,-0.0 2,-1.1 0, 0.0 0, 0.0 0.075 360.0 144.6-131.4 19.6 3.2 -4.3 -0.3 3 222 A N + 0 0 135 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.495 33.8 96.9 -72.2 94.5 2.0 -5.5 -3.8 4 223 A H - 0 0 151 -2,-1.1 -1,-0.2 2,-0.0 0, 0.0 -0.029 53.6-177.5-170.6 46.1 3.2 -9.2 -3.9 5 224 A V + 0 0 91 1,-0.1 4,-0.2 2,-0.1 2,-0.0 -0.234 8.4 167.0 -61.4 134.7 0.1 -11.3 -2.8 6 225 A G - 0 0 55 2,-1.0 -1,-0.1 0, 0.0 -2,-0.0 0.222 69.3 -42.2-109.3-122.3 0.4 -15.1 -2.5 7 226 A K S S+ 0 0 155 1,-0.1 2,-0.6 -2,-0.0 -2,-0.1 0.794 130.1 66.7 -79.4 -32.4 -2.2 -17.4 -0.8 8 227 A Y S S- 0 0 44 4,-0.0 -2,-1.0 3,-0.0 -1,-0.1 -0.836 76.6-154.1 -95.1 116.2 -2.5 -14.8 2.0 9 228 A T > - 0 0 45 -2,-0.6 4,-2.1 -4,-0.2 3,-0.3 -0.551 31.5-109.7 -80.4 154.2 -4.1 -11.4 0.9 10 229 A P H > S+ 0 0 92 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.766 124.1 55.0 -55.7 -25.7 -3.2 -8.2 3.0 11 230 A E H > S+ 0 0 153 2,-0.2 4,-2.0 3,-0.2 5,-0.1 0.904 107.8 47.2 -69.3 -46.3 -6.9 -8.4 4.2 12 231 A E H > S+ 0 0 27 -3,-0.3 4,-1.8 2,-0.2 -1,-0.2 0.839 114.3 47.1 -62.3 -38.9 -6.4 -12.0 5.5 13 232 A I H X S+ 0 0 62 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.916 114.2 45.8 -72.0 -44.4 -3.1 -11.0 7.2 14 233 A E H X S+ 0 0 131 -4,-1.9 4,-1.5 -5,-0.2 -2,-0.2 0.846 114.0 51.9 -61.6 -35.4 -4.7 -7.9 8.8 15 234 A K H X S+ 0 0 102 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.830 107.2 50.1 -72.2 -36.9 -7.7 -10.2 9.7 16 235 A L H X S+ 0 0 1 -4,-1.8 4,-1.1 2,-0.2 -2,-0.2 0.870 114.1 46.0 -69.3 -37.3 -5.4 -12.8 11.4 17 236 A K H X S+ 0 0 96 -4,-1.8 4,-1.2 2,-0.2 -2,-0.2 0.773 112.7 51.1 -72.0 -32.1 -3.8 -9.9 13.4 18 237 A E H X S+ 0 0 88 -4,-1.5 4,-2.0 2,-0.2 3,-0.4 0.954 115.3 40.6 -66.1 -54.3 -7.3 -8.5 14.2 19 238 A L H X>S+ 0 0 24 -4,-2.6 4,-2.2 1,-0.2 5,-0.6 0.701 106.8 67.8 -66.3 -26.4 -8.5 -11.9 15.5 20 239 A R H X5S+ 0 0 83 -4,-1.1 4,-1.5 2,-0.2 -1,-0.2 0.912 110.8 31.2 -60.4 -47.8 -5.1 -12.4 17.2 21 240 A I H <5S+ 0 0 132 -4,-1.2 -2,-0.2 -3,-0.4 -1,-0.2 0.872 119.5 54.8 -77.2 -39.9 -5.8 -9.6 19.7 22 241 A K H <5S+ 0 0 147 -4,-2.0 -2,-0.2 1,-0.1 -3,-0.2 0.809 125.3 22.4 -67.1 -35.0 -9.6 -10.2 19.8 23 242 A H H <5S- 0 0 76 -4,-2.2 2,-0.5 -5,-0.1 -3,-0.2 0.828 91.5-150.9 -97.1 -48.9 -9.3 -13.9 20.7 24 243 A G S < + 0 0 77 -7,-0.2 4,-1.8 1,-0.2 3,-0.3 -0.396 24.3 150.7 -84.5 63.6 -7.2 -19.1 19.4 27 246 A W H > + 0 0 34 -2,-2.0 4,-2.6 1,-0.2 -1,-0.2 0.746 69.7 62.0 -64.3 -28.8 -5.1 -19.5 16.2 28 247 A A H > S+ 0 0 67 -3,-0.3 4,-1.8 2,-0.2 -1,-0.2 0.902 107.4 42.2 -61.3 -44.2 -7.2 -22.6 15.4 29 248 A T H > S+ 0 0 68 -3,-0.3 4,-1.5 2,-0.2 -2,-0.2 0.832 113.1 54.2 -73.1 -36.4 -10.3 -20.3 15.2 30 249 A I H X S+ 0 0 0 -4,-1.8 4,-2.0 2,-0.2 3,-0.4 0.969 114.2 39.8 -59.9 -55.9 -8.4 -17.6 13.3 31 250 A G H X>S+ 0 0 1 -4,-2.6 5,-2.4 1,-0.2 4,-1.5 0.848 111.4 58.6 -63.0 -36.9 -7.2 -20.1 10.6 32 251 A A H <5S+ 0 0 82 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.815 109.7 44.2 -62.6 -35.1 -10.7 -21.8 10.6 33 252 A A H <5S+ 0 0 75 -4,-1.5 -2,-0.2 -3,-0.4 -1,-0.2 0.888 116.6 45.9 -72.5 -42.9 -12.2 -18.4 9.7 34 253 A L H <5S- 0 0 24 -4,-2.0 -2,-0.2 -5,-0.1 -1,-0.2 0.623 108.2-120.6 -76.4 -17.8 -9.5 -17.6 7.0 35 254 A G T <5S+ 0 0 57 -4,-1.5 2,-0.2 1,-0.3 -3,-0.2 0.843 77.3 114.1 72.0 35.4 -9.6 -21.1 5.4 36 255 A R S - 0 0 77 -2,-0.2 4,-2.1 1,-0.1 5,-0.2 -0.622 29.8-141.6 -73.9 131.2 -3.8 -23.8 8.5 38 257 A A H > S+ 0 0 31 -2,-0.3 4,-1.8 1,-0.2 -1,-0.1 0.881 105.5 52.0 -56.5 -42.5 -3.8 -22.6 12.2 39 258 A S H > S+ 0 0 99 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.845 109.8 49.1 -61.3 -38.3 -0.1 -23.5 12.4 40 259 A S H > S+ 0 0 49 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.850 110.8 46.8 -78.1 -38.9 0.7 -21.5 9.2 41 260 A V H X S+ 0 0 0 -4,-2.1 4,-1.9 2,-0.2 -1,-0.2 0.860 115.6 49.0 -68.4 -34.9 -1.1 -18.2 10.4 42 261 A K H X S+ 0 0 96 -4,-1.8 4,-1.9 -5,-0.2 -2,-0.2 0.904 114.4 43.7 -67.0 -45.0 0.6 -18.6 13.8 43 262 A D H X S+ 0 0 97 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.835 112.6 52.9 -70.1 -37.3 4.1 -19.1 12.1 44 263 A R H X S+ 0 0 74 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.906 114.7 41.1 -64.8 -44.9 3.5 -16.2 9.6 45 264 A C H < S+ 0 0 23 -4,-1.9 -2,-0.2 2,-0.2 -1,-0.2 0.817 113.7 53.6 -71.8 -36.2 2.6 -13.8 12.4 46 265 A R H < S+ 0 0 205 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.904 110.7 45.6 -65.6 -44.2 5.5 -15.2 14.7 47 266 A L H < S+ 0 0 83 -4,-2.3 2,-2.5 1,-0.2 -2,-0.2 0.928 82.3 173.8 -62.0 -46.4 8.0 -14.6 11.9 48 267 A M < + 0 0 143 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.1 -0.364 60.8 53.7 72.4 -62.1 6.4 -11.1 11.4 49 268 A K S S- 0 0 148 -2,-2.5 2,-0.3 -3,-0.2 -2,-0.0 -0.208 79.7-140.7 -79.2-177.5 9.2 -10.1 8.8 50 269 A D - 0 0 91 -2,-0.1 2,-1.6 -3,-0.1 3,-0.2 -0.839 6.6-146.0-154.2 113.3 10.1 -12.2 5.7 51 270 A T + 0 0 132 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.650 32.6 162.9 -78.0 83.8 13.6 -12.8 4.4 52 271 A C + 0 0 98 -2,-1.6 2,-0.3 2,-0.0 -1,-0.2 0.792 56.7 68.1 -73.3 -33.0 12.6 -12.9 0.7 53 272 A N S S- 0 0 128 -3,-0.2 -3,-0.0 1,-0.1 0, 0.0 -0.662 70.5-148.1 -90.6 145.3 16.3 -12.3 -0.4 54 273 A T 0 0 161 -2,-0.3 -1,-0.1 1,-0.0 -3,-0.0 0.874 360.0 360.0 -73.2 -43.3 19.1 -14.9 0.0 55 274 A G 0 0 137 0, 0.0 -1,-0.0 0, 0.0 -4,-0.0 0.225 360.0 360.0 145.3 360.0 21.7 -12.0 0.4