==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 30-APR-02 1LM0 . COMPND 2 MOLECULE: CYTOCHROME C MATURATION PROTEIN E; . SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA PUTREFACIENS; . AUTHOR F.ARNESANO,L.BANCI,P.D.BARKER,I.BERTINI,A.ROSATO,X.C.SU, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6008.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 61.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 31.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 32 A S 0 0 171 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.8 17.3 -6.1 11.1 2 33 A N - 0 0 103 1,-0.1 25,-0.0 25,-0.0 0, 0.0 -0.697 360.0-128.8 -77.8 125.8 14.5 -4.4 9.1 3 34 A L - 0 0 129 -2,-0.5 2,-0.3 25,-0.1 -1,-0.1 -0.028 16.6-155.5 -67.4 172.9 11.4 -4.1 11.3 4 35 A N + 0 0 98 26,-0.0 2,-0.3 2,-0.0 25,-0.1 -0.835 24.2 150.8-157.7 111.6 7.9 -5.3 10.2 5 36 A L - 0 0 73 -2,-0.3 25,-2.4 23,-0.1 2,-0.4 -0.987 39.3-118.8-151.2 149.1 4.6 -3.9 11.6 6 37 A F E +a 30 0A 112 -2,-0.3 2,-0.3 23,-0.2 25,-0.2 -0.810 34.0 174.6 -99.0 126.1 1.0 -3.3 10.3 7 38 A Y E -a 31 0A 106 23,-2.8 25,-2.7 -2,-0.4 22,-0.0 -0.931 35.5 -98.6-133.3 154.0 -0.5 0.2 10.1 8 39 A T > - 0 0 41 -2,-0.3 4,-2.2 23,-0.2 3,-0.5 -0.520 24.9-137.9 -73.8 131.3 -3.7 1.8 8.7 9 40 A P T 4 S+ 0 0 0 0, 0.0 51,-0.1 0, 0.0 -1,-0.1 0.925 103.4 53.3 -56.0 -52.0 -3.4 3.4 5.2 10 41 A S T >> S+ 0 0 3 49,-0.3 4,-1.0 1,-0.2 3,-0.8 0.809 109.3 51.4 -54.0 -35.9 -5.5 6.5 6.2 11 42 A E T 34 S+ 0 0 65 -3,-0.5 2,-1.2 1,-0.2 -1,-0.2 0.983 102.1 58.7 -62.6 -58.3 -3.1 7.0 9.1 12 43 A I T 3< S+ 0 0 9 -4,-2.2 5,-0.4 1,-0.2 6,-0.2 0.072 106.9 50.8 -71.8 33.0 0.0 6.8 6.9 13 44 A V T X4 S+ 0 0 25 -2,-1.2 3,-1.8 -3,-0.8 6,-0.7 0.502 91.7 69.0-112.0 -76.4 -1.2 9.8 4.8 14 45 A N T 3< S- 0 0 108 -4,-1.0 -1,-0.1 1,-0.3 45,-0.0 -0.252 127.8 -18.4 -64.4 101.3 -2.2 12.7 7.1 15 46 A G T 3 S+ 0 0 29 -2,-0.5 -1,-0.3 -3,-0.1 7,-0.3 0.896 127.8 78.0 72.7 40.1 0.9 14.1 8.8 16 47 A K S < >S- 0 0 47 -3,-1.8 5,-1.2 5,-0.1 4,-0.4 0.136 108.6 -12.8-139.8-105.3 3.0 11.0 8.0 17 48 A T T > 5S+ 0 0 3 -5,-0.4 3,-1.1 3,-0.2 -4,-0.1 0.965 134.0 52.9 -72.3 -53.8 4.5 10.2 4.5 18 49 A D T 3 5S+ 0 0 109 -5,-0.5 -1,-0.1 1,-0.3 -4,-0.1 0.875 123.3 29.5 -47.3 -48.7 2.5 12.8 2.5 19 50 A T T 3 5S- 0 0 76 -6,-0.7 -1,-0.3 70,-0.1 -2,-0.2 0.426 100.3-139.0 -95.9 -5.1 3.6 15.6 4.9 20 51 A G T < 5 + 0 0 45 -3,-1.1 -3,-0.2 -4,-0.4 -2,-0.1 0.825 60.6 125.7 48.1 47.4 7.0 13.8 5.7 21 52 A V S - 0 0 137 -2,-0.1 3,-1.4 -3,-0.1 2,-0.4 -0.953 33.0 -79.6-155.3 158.5 10.3 9.2 6.3 25 56 A A T 3 S+ 0 0 40 -2,-0.3 61,-0.2 1,-0.2 3,-0.1 -0.594 112.8 55.0 -67.3 125.0 11.1 7.6 2.9 26 57 A G T 3 S+ 0 0 49 59,-1.7 -1,-0.2 1,-0.5 2,-0.2 -0.114 80.0 104.0 138.7 -36.8 13.6 4.8 3.8 27 58 A Q < - 0 0 83 -3,-1.4 58,-2.3 57,-0.1 -1,-0.5 -0.549 63.2-135.0 -83.9 143.5 11.6 2.8 6.5 28 59 A R E + B 0 84A 63 56,-0.2 56,-0.3 -2,-0.2 2,-0.2 -0.834 38.4 152.2 -92.2 129.5 10.0 -0.5 5.8 29 60 A I E - B 0 83A 28 54,-2.5 54,-2.6 -2,-0.5 2,-0.5 -0.820 41.5-113.4-140.4 178.0 6.4 -0.9 7.2 30 61 A R E -aB 6 82A 40 -25,-2.4 -23,-2.8 -2,-0.2 2,-0.4 -0.991 18.9-151.2-121.1 123.0 3.3 -2.8 6.3 31 62 A V E -aB 7 81A 7 50,-2.6 50,-3.1 -2,-0.5 2,-0.4 -0.775 18.1-176.1 -84.2 133.4 0.1 -1.0 5.1 32 63 A G E + B 0 80A 20 -25,-2.7 2,-0.3 -2,-0.4 48,-0.2 -0.974 28.8 95.4-137.6 120.4 -3.0 -3.0 6.1 33 64 A G E - B 0 79A 11 46,-1.8 46,-1.3 -2,-0.4 2,-0.4 -0.935 68.6 -53.5-179.0-169.4 -6.5 -1.8 5.1 34 65 A M E -CB 54 78A 66 20,-2.2 20,-2.6 -2,-0.3 2,-0.4 -0.779 38.3-138.5-102.0 133.2 -9.3 -2.2 2.5 35 66 A V E -C 53 0A 5 42,-2.6 41,-0.6 -2,-0.4 42,-0.3 -0.753 23.0-127.1 -85.0 134.4 -8.9 -1.8 -1.3 36 67 A T E > - 0 0 55 16,-0.5 3,-2.3 -2,-0.4 4,-0.4 -0.516 23.6-111.4 -80.5 150.0 -11.8 0.1 -3.1 37 68 A V E 3 S+ 0 0 119 1,-0.3 3,-0.4 -2,-0.2 38,-0.1 0.866 117.6 37.0 -48.7 -46.9 -13.5 -1.6 -6.0 38 69 A G E 3 S+ 0 0 65 1,-0.2 -1,-0.3 37,-0.0 -2,-0.0 0.074 93.6 94.8 -95.9 21.9 -12.0 0.9 -8.6 39 70 A S E < + 0 0 11 -3,-2.3 13,-0.6 13,-0.1 2,-0.4 0.805 59.6 87.7 -82.0 -36.0 -8.6 1.2 -6.9 40 71 A M E +C 51 0A 24 -4,-0.4 2,-0.4 -3,-0.4 11,-0.2 -0.572 48.5 171.2 -76.0 125.5 -6.5 -1.3 -8.8 41 72 A V E -C 50 0A 74 9,-2.8 9,-2.6 -2,-0.4 2,-0.3 -0.984 8.8-170.4-134.3 123.9 -4.8 -0.2 -12.0 42 73 A R E -C 49 0A 137 -2,-0.4 7,-0.3 7,-0.2 26,-0.0 -0.800 23.6-118.5-100.7 152.8 -2.3 -2.3 -13.9 43 74 A D > - 0 0 68 5,-3.0 3,-1.1 -2,-0.3 5,-0.0 -0.527 23.3-119.2 -77.2 159.4 -0.1 -1.1 -16.8 44 75 A P T 3 S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.796 115.8 75.8 -63.9 -26.7 -0.5 -2.8 -20.3 45 76 A N T 3 S- 0 0 94 1,-0.1 4,-0.1 3,-0.0 -3,-0.0 0.882 95.5-150.3 -40.9 -44.9 3.2 -3.6 -19.5 46 77 A S S < S+ 0 0 50 -3,-1.1 -1,-0.1 2,-0.4 3,-0.1 0.530 81.4 72.5 73.9 12.2 1.5 -6.2 -17.2 47 78 A L S S+ 0 0 86 1,-0.1 2,-0.4 20,-0.1 -1,-0.0 0.557 83.0 71.0-115.2 -30.8 4.4 -6.0 -14.7 48 79 A H + 0 0 88 18,-0.2 -5,-3.0 20,-0.0 -2,-0.4 -0.785 62.3 163.8 -93.5 132.2 3.7 -2.5 -13.2 49 80 A V E -CD 42 65A 12 16,-2.8 16,-2.6 -2,-0.4 2,-0.3 -0.993 12.4-178.5-147.8 141.5 0.7 -2.4 -11.0 50 81 A Q E -CD 41 64A 86 -9,-2.6 -9,-2.8 -2,-0.3 2,-0.3 -0.988 2.5-172.2-144.3 154.0 -0.6 0.2 -8.4 51 82 A F E -CD 40 63A 1 12,-2.6 12,-3.1 -2,-0.3 2,-0.3 -0.998 20.9-132.2-146.8 143.0 -3.5 0.4 -6.1 52 83 A A E - D 0 62A 9 -13,-0.6 -16,-0.5 -2,-0.3 2,-0.3 -0.712 27.8-172.2 -86.0 144.9 -5.1 2.9 -3.8 53 84 A V E +CD 35 61A 2 8,-2.5 8,-2.9 -2,-0.3 -18,-0.2 -0.993 8.0 167.1-142.9 145.0 -6.1 1.5 -0.3 54 85 A H E -CD 34 60A 48 -20,-2.6 -20,-2.2 -2,-0.3 2,-0.3 -0.734 17.2-148.9-142.7-177.3 -8.0 3.2 2.6 55 86 A D > - 0 0 42 4,-0.8 3,-2.3 -2,-0.2 4,-0.4 -0.897 48.9 -78.8-149.0 179.2 -9.8 2.6 5.9 56 87 A S T 3 S+ 0 0 111 1,-0.3 -2,-0.0 -2,-0.3 0, 0.0 0.700 116.3 81.7 -54.9 -23.5 -12.8 4.0 7.9 57 88 A L T 3 S- 0 0 119 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.538 104.9-126.0 -65.5 -5.4 -10.4 6.9 8.8 58 89 A G S < S+ 0 0 72 -3,-2.3 2,-0.3 1,-0.2 -2,-0.1 0.864 70.3 115.1 67.7 39.8 -11.4 8.3 5.4 59 90 A G - 0 0 12 -4,-0.4 -4,-0.8 2,-0.0 2,-0.4 -0.977 50.9-150.3-135.3 143.8 -7.9 8.7 4.0 60 91 A E E -D 54 0A 108 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.972 7.2-163.8-120.5 129.5 -6.6 6.8 0.9 61 92 A I E -D 53 0A 6 -8,-2.9 -8,-2.5 -2,-0.4 2,-0.4 -0.920 17.1-131.8-112.2 138.0 -2.9 6.0 0.4 62 93 A L E -D 52 0A 74 -2,-0.4 29,-1.0 27,-0.4 2,-0.4 -0.799 20.3-165.1 -90.4 133.2 -1.5 4.9 -3.0 63 94 A V E -De 51 91A 0 -12,-3.1 -12,-2.6 -2,-0.4 2,-0.3 -0.954 5.5-151.2-119.3 135.5 0.7 1.8 -3.1 64 95 A T E -De 50 92A 24 27,-2.4 29,-2.8 -2,-0.4 2,-0.3 -0.837 10.6-172.6-112.3 146.7 3.0 0.9 -6.0 65 96 A Y E -D 49 0A 23 -16,-2.6 -16,-2.8 -2,-0.3 29,-0.1 -0.995 13.6-159.8-146.0 136.4 4.0 -2.7 -7.1 66 97 A D S S+ 0 0 104 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -0.142 70.5 40.3-125.2 37.2 6.5 -3.8 -9.8 67 98 A D S S- 0 0 90 -18,-0.1 2,-0.3 27,-0.0 -20,-0.1 -0.903 104.9 -57.6-158.9 179.4 5.7 -7.4 -10.6 68 99 A L - 0 0 119 -2,-0.3 -2,-0.1 1,-0.1 -21,-0.1 -0.511 56.9-127.2 -67.9 129.0 2.4 -9.4 -11.1 69 100 A L > - 0 0 14 -2,-0.3 3,-1.6 3,-0.1 -1,-0.1 -0.437 30.6 -95.5 -71.1 148.6 0.2 -9.2 -8.0 70 101 A P G > S+ 0 0 56 0, 0.0 3,-2.5 0, 0.0 4,-0.2 -0.399 110.0 1.0 -62.4 139.2 -1.1 -12.5 -6.5 71 102 A D G 3 S- 0 0 106 1,-0.3 -2,-0.0 2,-0.2 -3,-0.0 0.767 122.6 -77.7 50.6 29.0 -4.7 -13.3 -7.7 72 103 A L G < S- 0 0 108 -3,-1.6 -1,-0.3 1,-0.2 -3,-0.1 0.525 81.2 -77.0 60.0 6.8 -4.4 -10.1 -9.9 73 104 A F < - 0 0 3 -3,-2.5 -1,-0.2 1,-0.1 -2,-0.2 0.975 58.3-130.9 59.2 88.7 -5.1 -8.4 -6.5 74 105 A R - 0 0 124 -4,-0.2 3,-0.2 1,-0.1 -39,-0.1 -0.420 23.4-127.0 -73.9 137.0 -8.9 -9.0 -6.2 75 106 A E S S+ 0 0 94 1,-0.2 -38,-0.2 -2,-0.1 -39,-0.1 -0.262 79.9 43.7 -84.3 168.6 -10.8 -5.8 -5.4 76 107 A G S S+ 0 0 59 -41,-0.6 2,-0.3 1,-0.2 -1,-0.2 0.905 92.8 94.6 62.1 47.0 -13.3 -5.2 -2.5 77 108 A Q S S- 0 0 21 -42,-0.3 -42,-2.6 -3,-0.2 2,-0.5 -0.882 76.0-105.7-146.7 177.7 -11.3 -7.0 0.2 78 109 A G E +B 34 0A 32 -2,-0.3 -44,-0.2 -44,-0.3 2,-0.2 -0.961 43.4 165.8-117.9 116.6 -8.8 -6.2 3.0 79 110 A I E -B 33 0A 4 -46,-1.3 -46,-1.8 -2,-0.5 2,-0.4 -0.663 31.6-125.4-118.0 168.6 -5.2 -7.2 2.5 80 111 A V E -BF 32 97A 21 17,-1.5 17,-2.7 -48,-0.2 2,-0.4 -0.975 21.3-166.8-117.1 139.9 -1.8 -6.3 4.0 81 112 A A E -BF 31 96A 0 -50,-3.1 -50,-2.6 -2,-0.4 2,-0.4 -0.998 7.7-153.0-126.0 126.1 1.1 -5.0 1.9 82 113 A Q E +BF 30 95A 3 13,-2.7 13,-1.4 -2,-0.4 12,-1.0 -0.861 35.3 138.2 -98.9 134.0 4.7 -4.8 3.1 83 114 A G E -BF 29 93A 8 -54,-2.6 -54,-2.5 -2,-0.4 2,-0.4 -0.960 48.6-107.8-162.3 170.8 6.8 -2.2 1.5 84 115 A V E -BF 28 92A 64 8,-2.3 8,-2.3 -2,-0.3 2,-0.4 -0.920 36.2-115.3-111.9 136.9 9.5 0.6 1.9 85 116 A L E + F 0 91A 4 -58,-2.3 -59,-1.7 -2,-0.4 6,-0.2 -0.640 58.6 138.3 -72.1 125.1 8.6 4.2 1.6 86 117 A G E + 0 0 52 4,-1.1 2,-0.3 -2,-0.4 5,-0.2 0.531 51.1 65.2-140.8 -28.5 10.5 5.5 -1.4 87 118 A E E > S- F 0 90A 70 3,-1.9 3,-1.9 0, 0.0 4,-0.1 -0.422 99.0-114.5-115.9 49.3 8.4 7.8 -3.6 88 119 A D T 3 S+ 0 0 123 -2,-0.3 3,-0.1 1,-0.3 -3,-0.0 0.645 109.4 15.7 12.2 70.0 8.0 10.7 -1.0 89 120 A G T 3 S+ 0 0 16 1,-0.5 -27,-0.4 -27,-0.0 -1,-0.3 -0.087 121.6 70.2 134.5 -36.2 4.3 10.2 -0.8 90 121 A K E < S- F 0 87A 72 -3,-1.9 -3,-1.9 -73,-0.1 -4,-1.1 -0.809 70.8-138.5-110.4 155.3 3.9 6.7 -2.3 91 122 A L E -eF 63 85A 5 -29,-1.0 -27,-2.4 -2,-0.3 2,-0.7 -0.966 9.4-137.6-116.8 130.6 5.1 3.4 -0.8 92 123 A A E +eF 64 84A 42 -8,-2.3 -8,-2.3 -2,-0.4 2,-0.4 -0.796 33.6 171.8 -92.1 111.7 6.9 0.7 -2.9 93 124 A A E + F 0 83A 3 -29,-2.8 -10,-0.2 -2,-0.7 -27,-0.2 -0.988 22.9 158.4-126.8 132.6 5.4 -2.7 -1.8 94 125 A T E + 0 0 67 -12,-1.0 2,-1.3 -2,-0.4 -11,-0.1 0.531 63.2 78.3-122.1 -20.5 5.9 -6.2 -3.3 95 126 A E E + F 0 82A 86 -13,-1.4 -13,-2.7 2,-0.1 2,-0.5 -0.678 58.7 166.9 -96.3 82.7 5.0 -8.5 -0.4 96 127 A V E - F 0 81A 13 -2,-1.3 2,-0.6 -15,-0.3 -15,-0.2 -0.889 17.3-166.4 -97.5 125.7 1.2 -8.4 -0.4 97 128 A L E - F 0 80A 78 -17,-2.7 2,-1.7 -2,-0.5 -17,-1.5 -0.914 6.1-163.0-114.8 102.4 -0.5 -11.1 1.7 98 129 A A > + 0 0 42 -2,-0.6 2,-2.4 -19,-0.2 3,-0.6 -0.315 27.1 157.5 -83.0 56.4 -4.2 -11.4 0.8 99 130 A K T 3 + 0 0 106 -2,-1.7 -1,-0.1 1,-0.2 -2,-0.0 -0.365 27.9 123.7 -74.9 55.4 -5.1 -13.3 4.0 100 131 A H T 3 0 0 87 -2,-2.4 -1,-0.2 -23,-0.0 -21,-0.0 0.899 360.0 360.0 -82.6 -46.9 -8.8 -12.1 3.7 101 132 A D < 0 0 174 -3,-0.6 -2,-0.1 0, 0.0 -3,-0.0 0.774 360.0 360.0 47.4 360.0 -10.3 -15.7 3.7