==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 30-APR-02 1LM2 . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROMONAS ACETOXIDANS; . AUTHOR M.ASSFALG,I.BERTINI,M.BRUSCHI,C.MICHEL,P.TURANO . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6015.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 28 41.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 102 0, 0.0 15,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 177.2 4.3 -7.9 10.1 2 2 A D + 0 0 92 15,-0.1 15,-3.9 16,-0.1 16,-2.3 0.402 360.0 21.5-146.3 -46.7 7.0 -5.6 8.9 3 3 A V S S- 0 0 59 13,-0.3 13,-0.2 14,-0.2 12,-0.1 -0.589 77.5-163.2-133.5 70.0 7.4 -6.1 5.1 4 4 A V - 0 0 41 -2,-0.2 2,-0.4 10,-0.1 11,-0.3 -0.190 9.1-163.0 -53.6 144.0 4.2 -7.7 3.9 5 5 A T - 0 0 63 9,-0.2 2,-0.4 11,-0.0 9,-0.2 -0.990 13.3-167.9-136.5 143.7 4.5 -9.3 0.5 6 6 A Y - 0 0 114 -2,-0.4 7,-2.0 9,-0.0 2,-0.7 -0.948 12.4-149.3-136.7 113.9 2.0 -10.4 -2.1 7 7 A E B -A 12 0A 154 -2,-0.4 5,-0.2 5,-0.2 2,-0.2 -0.730 22.7-172.6 -85.2 115.0 2.9 -12.6 -5.1 8 8 A N - 0 0 65 3,-1.3 3,-0.5 -2,-0.7 -2,-0.0 -0.445 34.2-120.1 -99.5 175.3 0.7 -11.8 -8.0 9 9 A K S S+ 0 0 217 1,-0.2 2,-0.3 -2,-0.2 3,-0.1 0.758 113.1 38.6 -85.2 -28.7 0.3 -13.5 -11.4 10 10 A K S S- 0 0 174 1,-0.1 2,-0.3 0, 0.0 -1,-0.2 -0.575 134.6 -46.9-121.9 65.9 1.3 -10.3 -13.2 11 11 A G S S- 0 0 18 -3,-0.5 -3,-1.3 -2,-0.3 2,-0.3 -0.748 71.8 -85.1 110.0-157.9 4.0 -8.8 -11.0 12 12 A N B -A 7 0A 61 -2,-0.3 55,-0.7 -5,-0.2 -5,-0.2 -0.982 10.7-148.8-152.5 156.1 4.1 -8.3 -7.3 13 13 A V - 0 0 21 -7,-2.0 2,-0.9 -2,-0.3 53,-0.1 -0.570 18.3-166.2-128.3 66.8 3.0 -5.8 -4.7 14 14 A T - 0 0 80 51,-0.3 -9,-0.2 -9,-0.2 -10,-0.1 -0.387 17.5-160.0 -58.3 98.9 5.6 -6.0 -2.0 15 15 A F - 0 0 47 -2,-0.9 2,-0.3 -11,-0.3 -13,-0.1 -0.081 4.5-139.3 -74.0 178.5 3.9 -4.1 0.8 16 16 A D + 0 0 50 -13,-0.2 -13,-0.3 1,-0.1 -11,-0.0 -0.987 27.3 164.7-146.9 133.4 5.5 -2.5 3.8 17 17 A H S > S+ 0 0 92 -15,-3.9 4,-2.9 -2,-0.3 9,-0.2 0.775 88.0 18.4-109.9 -59.5 4.5 -2.4 7.4 18 18 A K H > S+ 0 0 135 -16,-2.3 4,-1.6 2,-0.2 -15,-0.1 0.929 127.4 51.1 -79.7 -50.8 7.5 -1.3 9.5 19 19 A A H 4 S+ 0 0 52 -17,-0.9 4,-0.4 1,-0.2 -1,-0.2 0.788 122.4 36.8 -56.5 -27.9 9.5 0.1 6.6 20 20 A H H >> S+ 0 0 61 -18,-0.4 4,-2.8 2,-0.2 3,-1.8 0.898 103.2 66.7 -88.9 -51.3 6.3 2.0 5.8 21 21 A A H 3< S+ 0 0 36 -4,-2.9 -2,-0.2 1,-0.3 -3,-0.2 0.775 91.5 72.2 -40.1 -29.9 5.2 2.8 9.3 22 22 A E T 3< S+ 0 0 147 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.947 117.4 14.2 -52.0 -56.3 8.3 4.9 9.3 23 23 A K T <4 S+ 0 0 164 -3,-1.8 -2,-0.2 -4,-0.4 -1,-0.2 0.894 137.3 43.5 -86.1 -47.7 6.8 7.5 7.1 24 24 A L S < S- 0 0 50 -4,-2.8 -3,-0.2 -7,-0.1 3,-0.1 0.910 80.1-151.0 -60.7-101.8 3.2 6.3 7.4 25 25 A G - 0 0 34 -8,-0.2 2,-3.1 1,-0.1 -4,-0.1 0.578 42.7 -95.2 128.2 35.1 2.4 5.6 11.0 26 26 A C S >> S+ 0 0 80 1,-0.3 3,-4.6 -9,-0.2 4,-1.9 -0.371 126.6 69.1 64.4 -75.8 -0.3 3.0 10.9 27 27 A D T 34 S+ 0 0 99 -2,-3.1 -1,-0.3 1,-0.3 -2,-0.1 0.783 82.5 77.9 -39.4 -31.5 -3.0 5.6 11.3 28 28 A A T 34 S+ 0 0 61 1,-0.1 -1,-0.3 -7,-0.1 -2,-0.1 0.848 120.9 5.2 -48.2 -37.6 -1.8 6.4 7.8 29 29 A C T <4 S+ 0 0 67 -3,-4.6 -2,-0.2 0, 0.0 -1,-0.1 0.757 133.5 50.6-111.0 -58.3 -3.9 3.4 6.7 30 30 A H < - 0 0 30 -4,-1.9 2,-0.2 5,-0.0 3,-0.1 -0.185 67.8-148.6 -76.7 173.8 -5.6 2.2 9.8 31 31 A E - 0 0 162 2,-0.3 -5,-0.1 1,-0.2 -4,-0.0 -0.701 65.2 -30.3-151.0 91.6 -7.7 4.4 12.1 32 32 A G S S+ 0 0 61 -2,-0.2 -1,-0.2 0, 0.0 -6,-0.0 0.904 128.3 13.9 62.9 103.1 -7.8 3.5 15.8 33 33 A T S S- 0 0 129 -3,-0.1 -2,-0.3 2,-0.0 0, 0.0 0.881 83.7-134.1 67.4 104.7 -7.4 -0.2 16.4 34 34 A P + 0 0 91 0, 0.0 3,-0.1 0, 0.0 -7,-0.0 0.024 42.4 144.7 -75.0-172.6 -6.2 -2.1 13.3 35 35 A A - 0 0 97 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.103 66.2 -37.0 173.1 -55.5 -7.6 -5.3 11.9 36 36 A K - 0 0 159 2,-0.1 0, 0.0 1,-0.0 0, 0.0 -0.961 28.0-141.9-177.6 172.1 -7.5 -5.3 8.2 37 37 A I - 0 0 71 -2,-0.3 11,-0.0 2,-0.1 6,-0.0 0.201 43.9-125.3-133.0 8.0 -7.8 -3.2 5.0 38 38 A A + 0 0 43 1,-0.2 2,-0.4 5,-0.1 5,-0.2 0.911 42.3 178.2 39.7 87.7 -9.5 -5.8 2.8 39 39 A I + 0 0 48 4,-0.1 -1,-0.2 1,-0.1 -2,-0.1 -0.941 30.4 105.2-122.2 143.2 -7.1 -5.7 -0.1 40 40 A D S S- 0 0 141 -2,-0.4 -1,-0.1 0, 0.0 -2,-0.0 -0.024 92.5 -29.3-172.2 -66.1 -7.3 -7.8 -3.3 41 41 A K S S+ 0 0 149 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.328 122.5 42.0-175.5 80.6 -8.4 -5.9 -6.3 42 42 A K S S+ 0 0 143 4,-0.0 -3,-0.1 -2,-0.0 0, 0.0 -0.062 116.0 34.7 172.3 -50.0 -10.8 -3.0 -5.9 43 43 A S S > >S+ 0 0 49 -5,-0.2 3,-3.7 2,-0.2 5,-0.7 0.841 109.2 61.5 -92.6 -43.0 -9.7 -1.0 -2.9 44 44 A A T 3 5S+ 0 0 14 1,-0.3 6,-0.4 4,-0.2 5,-0.2 0.702 107.2 50.4 -56.5 -18.6 -5.9 -1.5 -3.3 45 45 A H T 3 5S+ 0 0 112 4,-0.1 -1,-0.3 3,-0.1 -2,-0.2 0.316 111.4 60.7-100.2 4.4 -6.5 0.3 -6.6 46 46 A K T X>5S- 0 0 128 -3,-3.7 3,-1.7 5,-0.0 4,-0.9 -0.304 123.1 -48.7-113.1-162.6 -8.4 3.1 -4.8 47 47 A D T 345S+ 0 0 106 1,-0.3 5,-0.4 2,-0.2 -3,-0.1 0.772 122.5 84.0 -40.9 -29.1 -7.6 5.6 -2.1 48 48 A A T 34 + 0 0 45 -2,-0.8 2,-2.4 1,-0.1 3,-1.1 0.379 67.6 93.8-149.0 -46.1 2.1 8.1 -3.2 54 54 A K T 3 S+ 0 0 166 1,-0.2 3,-0.1 6,-0.1 -1,-0.1 -0.372 96.0 36.9 -61.8 80.7 1.7 11.1 -5.6 55 55 A S T 3 S+ 0 0 107 -2,-2.4 -1,-0.2 1,-0.7 2,-0.2 -0.080 115.5 36.1 169.7 -50.3 4.5 13.0 -3.9 56 56 A N S < S+ 0 0 107 -3,-1.1 2,-2.6 3,-0.0 -1,-0.7 -0.691 104.0 30.3-120.2 173.5 7.2 10.7 -2.8 57 57 A N S S- 0 0 127 -2,-0.2 -3,-0.1 1,-0.1 3,-0.1 -0.426 90.8-126.0 78.1 -66.0 8.8 7.5 -4.2 58 58 A G S S+ 0 0 59 -2,-2.6 2,-0.7 -5,-0.5 -1,-0.1 -0.708 84.0 74.0 128.9 -80.0 8.1 8.6 -7.7 59 59 A P + 0 0 70 0, 0.0 4,-0.1 0, 0.0 -3,-0.0 -0.612 43.7 151.0 -75.0 112.7 6.2 5.8 -9.6 60 60 A T + 0 0 20 -2,-0.7 5,-0.1 2,-0.1 3,-0.1 0.602 60.2 54.7-112.5 -23.9 2.6 5.9 -8.3 61 61 A K S > S- 0 0 167 1,-0.3 3,-3.1 3,-0.1 4,-0.3 -0.000 112.7 -18.0 -92.9-159.0 0.9 4.6 -11.4 62 62 A C T 3 S+ 0 0 121 1,-0.3 -1,-0.3 2,-0.1 -2,-0.1 -0.124 134.3 30.1 -44.7 135.8 1.5 1.4 -13.4 63 63 A G T 3 S+ 0 0 24 3,-0.1 5,-0.5 -3,-0.1 -1,-0.3 -0.030 92.2 102.4 99.4 -28.6 4.9 0.1 -12.5 64 64 A G S < S+ 0 0 27 -3,-3.1 -2,-0.1 3,-0.1 -3,-0.1 0.958 104.2 1.4 -48.6 -66.0 4.7 1.5 -9.0 65 65 A C S S+ 0 0 55 -4,-0.3 2,-1.3 1,-0.2 -51,-0.3 0.933 123.4 68.5 -87.3 -71.0 3.9 -1.8 -7.3 66 66 A H S S- 0 0 49 -55,-0.1 -1,-0.2 1,-0.1 -53,-0.1 -0.317 95.6-126.4 -54.6 90.0 3.9 -4.3 -10.1 67 67 A I 0 0 135 -2,-1.3 -1,-0.1 -55,-0.7 -3,-0.1 -0.195 360.0 360.0 -44.9 108.1 7.6 -4.2 -10.8 68 68 A K 0 0 209 -5,-0.5 -1,-0.0 -57,-0.1 -57,-0.0 -0.899 360.0 360.0-123.1 360.0 7.6 -3.5 -14.5