==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 02-MAY-02 1LMJ . COMPND 2 MOLECULE: FIBRILLIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.S.SMALLRIDGE,P.WHITEMAN,J.M.WERNER,I.D.CAMPBELL, . 86 1 6 6 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6091.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 40.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 17.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A T 0 0 171 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-156.8 -5.9 27.5 -10.1 2 4 A D + 0 0 78 1,-0.1 2,-0.1 2,-0.0 18,-0.0 0.918 360.0 178.7 39.2 68.5 -3.9 24.5 -11.2 3 5 A I - 0 0 119 18,-0.1 2,-1.3 1,-0.1 18,-0.4 -0.280 41.1 -79.9 -89.9 179.1 -1.0 25.1 -8.7 4 6 A D > + 0 0 67 1,-0.2 4,-0.7 16,-0.1 16,-0.1 -0.672 48.6 168.4 -85.6 93.6 2.1 23.1 -8.1 5 7 A E T 4 S+ 0 0 21 -2,-1.3 4,-0.3 19,-0.3 -1,-0.2 0.693 79.6 55.2 -76.3 -19.3 0.9 20.2 -5.9 6 8 A a T >4 S+ 0 0 37 1,-0.2 3,-0.8 2,-0.2 6,-0.2 0.752 99.1 60.2 -83.6 -26.1 4.2 18.5 -6.5 7 9 A R T 34 S+ 0 0 202 1,-0.2 -2,-0.2 -3,-0.1 -1,-0.2 0.772 83.1 82.5 -71.3 -26.0 6.2 21.5 -5.2 8 10 A I T 3< S- 0 0 134 -4,-0.7 -1,-0.2 1,-0.2 -2,-0.2 0.848 114.1 -17.1 -45.4 -39.3 4.4 21.1 -1.9 9 11 A S < - 0 0 26 -3,-0.8 3,-0.5 -4,-0.3 9,-0.2 -0.977 49.7-132.2-166.0 156.2 7.0 18.5 -1.1 10 12 A P S S+ 0 0 113 0, 0.0 3,-0.2 0, 0.0 8,-0.2 0.666 111.7 46.1 -86.4 -19.9 9.6 16.2 -2.6 11 13 A D S > S+ 0 0 108 1,-0.2 3,-3.3 3,-0.1 32,-0.2 0.058 71.3 128.7-109.2 21.9 8.4 13.2 -0.7 12 14 A L T 3 S+ 0 0 23 -3,-0.5 29,-0.3 1,-0.3 -1,-0.2 0.872 83.9 38.1 -42.8 -46.5 4.7 13.8 -1.5 13 15 A b T > S- 0 0 1 -3,-0.2 3,-0.8 29,-0.2 -1,-0.3 0.370 107.9-128.8 -88.1 3.8 4.4 10.2 -2.6 14 16 A G T < S+ 0 0 33 -3,-3.3 -2,-0.1 28,-0.3 -3,-0.1 0.634 95.8 1.1 57.9 12.5 6.7 9.1 0.1 15 17 A R T 3 S+ 0 0 161 -5,-0.1 -1,-0.3 1,-0.1 -3,-0.1 -0.022 122.9 66.4 173.2 -50.4 8.7 7.3 -2.6 16 18 A G S < S- 0 0 12 -3,-0.8 2,-0.4 -5,-0.1 13,-0.3 0.466 89.6 -83.3 -70.1-144.0 7.1 7.9 -6.0 17 19 A Q - 0 0 143 -4,-0.1 11,-1.6 -5,-0.1 2,-0.2 -0.986 31.8-124.8-137.2 124.9 6.9 11.2 -7.8 18 20 A a E -A 27 0A 18 -2,-0.4 9,-0.3 9,-0.3 2,-0.2 -0.470 29.1-159.1 -69.2 132.1 4.3 14.0 -7.4 19 21 A V E -A 26 0A 55 7,-3.7 7,-1.1 -2,-0.2 2,-0.4 -0.687 10.8-123.7-109.2 163.8 2.6 15.0 -10.6 20 22 A N E +A 25 0A 64 -2,-0.2 5,-0.2 5,-0.2 -16,-0.1 -0.868 31.3 165.8-111.3 143.1 0.7 18.2 -11.5 21 23 A T E > -A 24 0A 17 3,-1.7 3,-1.9 -2,-0.4 2,-0.2 -0.992 46.7 -78.6-152.0 154.9 -2.9 18.4 -12.7 22 24 A P T 3 S- 0 0 113 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.350 114.5 -15.6 -57.2 116.6 -5.7 21.1 -13.3 23 25 A G T 3 S+ 0 0 46 -2,-0.2 2,-0.3 1,-0.2 -3,-0.0 0.894 141.0 36.3 52.5 42.9 -7.2 21.8 -9.9 24 26 A D E < -A 21 0A 109 -3,-1.9 -3,-1.7 -21,-0.2 2,-0.3 -0.960 68.8-141.7 167.3-178.4 -5.6 18.6 -8.5 25 27 A F E -A 20 0A 50 -2,-0.3 2,-0.2 -5,-0.2 -5,-0.2 -0.953 3.9-154.8-159.5 176.2 -2.5 16.4 -8.7 26 28 A E E -A 19 0A 95 -7,-1.1 -7,-3.7 -2,-0.3 2,-0.3 -0.782 12.2-129.5-145.5-172.4 -1.2 12.8 -8.6 27 29 A b E -A 18 0A 27 -9,-0.3 2,-0.5 -2,-0.2 -9,-0.3 -0.981 10.8-136.9-147.9 158.7 1.9 10.7 -7.8 28 30 A K - 0 0 132 -11,-1.6 -10,-0.1 -2,-0.3 -15,-0.1 -0.679 32.9-164.2-117.9 74.3 4.2 8.1 -9.3 29 31 A c - 0 0 18 -2,-0.5 5,-0.1 -13,-0.3 -12,-0.1 0.253 12.4-123.5 -46.1-179.7 4.7 5.6 -6.4 30 32 A D - 0 0 94 -17,-0.2 -1,-0.1 -14,-0.1 -14,-0.1 0.104 66.7 -12.1-106.6-141.5 7.5 3.1 -6.5 31 33 A E S S- 0 0 144 1,-0.2 36,-0.1 -16,-0.0 -16,-0.0 0.783 131.8 -29.5 -23.1 -92.3 7.7 -0.8 -6.2 32 34 A G S S+ 0 0 11 14,-0.1 14,-4.2 2,-0.0 2,-0.3 0.079 95.9 137.5-124.9 23.5 4.1 -1.5 -5.0 33 35 A Y E -B 45 0B 37 12,-0.3 2,-0.5 33,-0.1 12,-0.3 -0.557 38.5-154.0 -75.4 131.0 3.3 1.7 -3.1 34 36 A E E -B 44 0B 57 10,-0.8 10,-1.2 -2,-0.3 8,-0.1 -0.911 36.3 -87.4-109.9 130.2 -0.2 3.0 -3.7 35 37 A S E -B 43 0B 50 -2,-0.5 2,-2.7 1,-0.2 3,-0.3 -0.005 37.6-134.7 -34.0 114.8 -1.0 6.7 -3.2 36 38 A G >> + 0 0 2 6,-2.2 4,-4.2 1,-0.2 3,-2.5 -0.268 49.1 151.8 -75.6 55.3 -1.8 7.0 0.5 37 39 A F T 34 + 0 0 149 -2,-2.7 -1,-0.2 1,-0.3 -2,-0.1 0.766 65.3 68.5 -57.0 -26.0 -4.9 9.1 -0.3 38 40 A M T 34 S+ 0 0 118 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.711 120.4 18.8 -66.6 -19.0 -6.4 7.7 2.9 39 41 A M T <4 S- 0 0 136 -3,-2.5 -2,-0.3 3,-0.0 -1,-0.2 0.619 137.5 -66.3-119.4 -32.2 -3.7 9.7 4.7 40 42 A M S < S- 0 0 140 -4,-4.2 -3,-0.1 2,-0.1 -27,-0.1 -0.289 80.0 -58.6 178.7 -81.2 -2.7 12.2 2.0 41 43 A K S S+ 0 0 34 -29,-0.3 -4,-0.2 -5,-0.2 -6,-0.1 0.180 84.5 125.4 178.0 33.5 -0.9 11.0 -1.1 42 44 A N S S- 0 0 44 -6,-0.4 -6,-2.2 -29,-0.1 2,-0.6 0.097 70.1 -71.7 -85.2-158.0 2.3 9.2 -0.1 43 45 A c E +B 35 0B 13 -8,-0.2 2,-0.4 -32,-0.2 -8,-0.2 -0.907 52.2 165.8-107.4 116.5 3.4 5.7 -1.0 44 46 A M E -B 34 0B 77 -10,-1.2 -10,-0.8 -2,-0.6 -7,-0.1 -0.820 46.3-100.8-136.2 96.0 1.5 2.9 0.8 45 47 A D E -B 33 0B 20 -2,-0.4 -12,-0.3 -12,-0.3 20,-0.1 0.399 42.3-119.9 -10.9 131.0 2.0 -0.6 -0.6 46 48 A I - 0 0 54 -14,-4.2 2,-1.1 1,-0.1 21,-0.2 0.071 33.8 -85.1 -70.4-173.6 -0.9 -1.7 -2.8 47 49 A D >> + 0 0 62 1,-0.2 3,-4.4 2,-0.1 4,-1.9 -0.629 43.9 177.0 -99.2 74.0 -3.2 -4.7 -2.2 48 50 A E H 3> S+ 0 0 10 -2,-1.1 4,-0.7 1,-0.3 -1,-0.2 0.735 80.6 66.1 -48.3 -22.6 -1.1 -7.4 -3.8 49 51 A d H 34 S+ 0 0 46 1,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.565 111.7 32.7 -76.7 -8.6 -4.0 -9.7 -2.6 50 52 A Q H <4 S+ 0 0 156 -3,-4.4 -2,-0.2 4,-0.0 -1,-0.2 0.579 100.6 76.8-117.6 -23.9 -6.2 -7.9 -5.0 51 53 A R H < S+ 0 0 153 -4,-1.9 -2,-0.1 1,-0.1 -3,-0.1 0.789 103.9 39.6 -59.5 -28.5 -3.8 -7.2 -7.8 52 54 A D < - 0 0 35 -4,-0.7 -1,-0.1 1,-0.1 31,-0.0 -0.980 64.9-152.9-128.4 138.0 -4.0 -10.8 -8.8 53 55 A P S S+ 0 0 110 0, 0.0 -1,-0.1 0, 0.0 30,-0.1 0.523 104.7 42.2 -82.1 -6.4 -7.1 -13.1 -9.0 54 56 A L S > S+ 0 0 92 28,-0.1 3,-3.4 29,-0.1 31,-0.4 0.550 81.3 126.4-111.8 -17.9 -4.8 -16.1 -8.4 55 57 A L T 3 S- 0 0 10 1,-0.3 4,-0.1 28,-0.3 6,-0.1 -0.196 101.2 -22.3 -46.9 118.9 -2.6 -14.6 -5.8 56 58 A e T > S+ 0 0 10 23,-0.2 3,-2.1 1,-0.2 -1,-0.3 0.774 92.6 155.9 44.0 27.0 -2.7 -16.9 -2.8 57 59 A R T < S+ 0 0 200 -3,-3.4 -1,-0.2 1,-0.3 -2,-0.2 0.810 80.7 23.6 -51.0 -31.9 -5.9 -18.0 -4.4 58 60 A G T 3 S+ 0 0 54 -4,-0.4 -1,-0.3 2,-0.1 -2,-0.1 0.033 134.8 28.1-123.9 25.5 -5.4 -21.3 -2.7 59 61 A G S < S- 0 0 27 -3,-2.1 2,-0.4 -4,-0.1 13,-0.3 -0.247 98.9 -53.8-145.1-125.6 -3.2 -20.2 0.2 60 62 A V E -C 71 0C 60 11,-1.8 11,-2.7 -2,-0.1 2,-0.8 -0.999 29.7-150.4-139.3 135.1 -2.6 -17.1 2.2 61 63 A d E -C 70 0C 34 -2,-0.4 2,-1.6 9,-0.2 9,-0.2 -0.834 10.4-176.3-108.9 97.0 -1.7 -13.5 1.1 62 64 A H E -C 69 0C 80 7,-3.2 7,-0.9 -2,-0.8 8,-0.1 -0.459 19.9-158.2 -88.9 63.5 0.4 -11.8 3.7 63 65 A N E +C 68 0C 48 -2,-1.6 5,-0.3 5,-0.2 2,-0.2 -0.168 20.4 173.0 -45.7 122.4 0.4 -8.5 1.9 64 66 A T E > -C 67 0C 43 3,-1.6 3,-1.0 1,-0.1 -16,-0.2 -0.436 38.3 -50.5-120.0-165.5 3.4 -6.5 3.1 65 67 A E T 3 S- 0 0 148 1,-0.3 -1,-0.1 -2,-0.2 -32,-0.1 -0.479 117.7 -14.6 -73.7 140.4 5.3 -3.3 2.3 66 68 A G T 3 S+ 0 0 2 -2,-0.2 2,-0.3 -34,-0.1 -1,-0.3 0.781 140.5 30.5 35.2 36.6 6.3 -2.7 -1.3 67 69 A S E < S-C 64 0C 36 -3,-1.0 -3,-1.6 -35,-0.2 2,-0.3 -0.967 74.8-123.2 169.9-178.7 5.5 -6.4 -1.8 68 70 A Y E -C 63 0C 14 -2,-0.3 2,-0.4 -5,-0.3 -5,-0.2 -0.994 12.5-134.9-153.1 148.4 3.4 -9.4 -0.6 69 71 A R E -C 62 0C 139 -7,-0.9 -7,-3.2 -2,-0.3 2,-0.5 -0.892 13.8-154.8-109.9 135.9 4.0 -12.9 0.8 70 72 A e E -C 61 0C 21 -2,-0.4 2,-0.4 10,-0.4 -9,-0.2 -0.913 11.4-175.6-111.4 131.8 2.1 -16.0 -0.3 71 73 A E E +C 60 0C 66 -11,-2.7 -11,-1.8 -2,-0.5 14,-0.1 -0.990 23.7 166.7-131.4 127.3 1.7 -19.0 1.9 72 74 A f S S- 0 0 25 -2,-0.4 -1,-0.1 -13,-0.3 -11,-0.1 0.806 88.2 -95.6 -77.5 -31.9 0.1 -22.4 1.0 73 75 A P > - 0 0 84 0, 0.0 3,-0.5 0, 0.0 -2,-0.1 0.562 56.1 -79.9 -71.9-169.3 1.6 -22.4 3.5 74 76 A P T 3 S+ 0 0 105 0, 0.0 3,-0.1 0, 0.0 -3,-0.0 0.286 106.4 71.9 -43.2 178.8 5.0 -23.8 2.4 75 77 A G T 3 S+ 0 0 90 1,-0.3 2,-0.0 3,-0.1 0, 0.0 0.168 97.5 65.0 90.6 -18.3 5.6 -27.5 1.8 76 78 A H S < S- 0 0 121 -3,-0.5 -1,-0.3 2,-0.0 9,-0.0 0.317 105.0 -85.9-104.2-128.0 3.5 -27.2 -1.3 77 79 A Q + 0 0 131 9,-2.9 2,-0.4 -3,-0.1 0, 0.0 -0.335 53.7 164.3-150.5 59.9 4.3 -25.1 -4.5 78 80 A L - 0 0 32 7,-0.3 7,-0.2 -8,-0.1 -8,-0.1 -0.695 42.6-112.1 -86.3 129.5 3.2 -21.6 -4.0 79 81 A S - 0 0 14 5,-1.2 4,-0.4 -2,-0.4 5,-0.3 -0.326 18.3-135.9 -59.4 133.0 4.6 -19.0 -6.3 80 82 A P S S- 0 0 100 0, 0.0 -10,-0.4 0, 0.0 -1,-0.1 0.923 94.2 -17.0 -56.1 -48.4 6.9 -16.5 -4.5 81 83 A N S S+ 0 0 86 -12,-0.1 -2,-0.1 3,-0.1 -26,-0.1 0.089 118.6 91.8-147.0 21.2 5.3 -13.5 -6.3 82 84 A I S S- 0 0 118 2,-0.1 -28,-0.1 -28,-0.1 -27,-0.1 0.708 88.3-125.8 -91.1 -23.5 3.5 -15.1 -9.2 83 85 A S + 0 0 4 -4,-0.4 -28,-0.3 -29,-0.1 -29,-0.1 0.938 68.8 90.3 75.6 91.9 0.2 -15.5 -7.3 84 86 A A - 0 0 15 -5,-0.3 -5,-1.2 -32,-0.0 -29,-0.2 -0.050 64.5-127.2 150.6 103.8 -1.1 -19.0 -7.3 85 87 A f 0 0 29 -31,-0.4 -7,-0.3 -7,-0.2 -26,-0.1 -0.290 360.0 360.0 -63.0 148.2 -0.5 -21.9 -4.9 86 88 A I 0 0 108 -28,-0.0 -9,-2.9 0, 0.0 -8,-0.1 -0.829 360.0 360.0-151.8 360.0 0.7 -25.2 -6.4