==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 29-NOV-11 2LMA . COMPND 2 MOLECULE: THP5 PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.K.PANDEY,M.M.KHAN,S.CHATTERJEE,V.P.DWIVEDI,S.TOUSIF,J.DAS, . 22 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2684.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 31.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 22.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A W 0 0 262 0, 0.0 3,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 83.4 2.1 0.0 -1.2 2 2 A R >> - 0 0 219 1,-0.2 2,-2.1 3,-0.0 3,-0.6 -0.067 360.0 -83.2 -56.5 160.6 5.8 0.2 -0.3 3 3 A P T 34 S+ 0 0 115 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.442 103.5 89.0 -69.8 79.1 8.2 2.2 -2.5 4 4 A Y T 3> S+ 0 0 176 -2,-2.1 4,-0.7 -3,-0.1 3,-0.1 0.493 91.4 24.6-135.4 -65.0 8.8 -0.5 -5.1 5 5 A L H <> S+ 0 0 87 -3,-0.6 4,-1.1 1,-0.2 -3,-0.0 0.738 109.0 75.8 -80.8 -24.4 6.4 -0.5 -8.0 6 6 A Q H >X S+ 0 0 87 -4,-0.5 4,-1.2 1,-0.2 3,-0.8 0.920 99.9 42.0 -52.0 -49.1 5.6 3.2 -7.5 7 7 A T H 3> S+ 0 0 73 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.820 101.5 71.0 -68.9 -31.4 8.9 4.2 -9.1 8 8 A E H 3< S+ 0 0 113 -4,-0.7 4,-0.4 1,-0.2 -1,-0.2 0.799 102.2 45.7 -55.1 -29.3 8.5 1.6 -11.8 9 9 A Y H XX S+ 0 0 174 -4,-1.1 4,-1.8 -3,-0.8 3,-1.1 0.904 110.8 49.5 -80.7 -45.4 5.7 3.8 -13.2 10 10 A Y H 3< S+ 0 0 119 -4,-1.2 -2,-0.2 1,-0.3 7,-0.2 0.824 98.6 69.9 -63.1 -31.8 7.6 7.1 -12.9 11 11 A D T 3< S+ 0 0 122 -4,-2.6 3,-0.3 1,-0.2 -1,-0.3 0.831 110.1 33.5 -55.2 -33.4 10.6 5.4 -14.7 12 12 A V T <4 S+ 0 0 123 -3,-1.1 3,-0.4 -4,-0.4 -1,-0.2 0.747 121.3 48.4 -93.2 -29.2 8.5 5.4 -17.8 13 13 A M S >< S+ 0 0 83 -4,-1.8 3,-0.8 1,-0.2 4,-0.3 -0.091 76.9 108.6-101.7 33.2 6.6 8.6 -17.1 14 14 A T T 3 + 0 0 73 -3,-0.3 -1,-0.2 1,-0.2 -3,-0.1 0.488 66.3 69.4 -86.0 -4.0 9.8 10.6 -16.3 15 15 A V T 3 S+ 0 0 112 -3,-0.4 -1,-0.2 1,-0.2 -2,-0.1 0.348 112.4 28.0 -93.8 4.8 9.5 12.5 -19.6 16 16 A I S < S+ 0 0 103 -3,-0.8 -2,-0.2 3,-0.0 -1,-0.2 0.275 117.7 57.2-143.5 3.2 6.4 14.3 -18.3 17 17 A S S > S+ 0 0 50 -4,-0.3 3,-0.9 -7,-0.2 4,-0.3 0.850 115.5 24.7-100.3 -68.4 7.0 14.4 -14.5 18 18 A P G > S+ 0 0 70 0, 0.0 3,-1.0 0, 0.0 4,-0.3 0.780 117.0 64.9 -69.7 -27.9 10.4 16.0 -13.8 19 19 A P G > S+ 0 0 71 0, 0.0 3,-0.5 0, 0.0 -2,-0.1 0.664 93.2 62.5 -69.7 -16.5 10.2 18.0 -17.1 20 20 A E G < S+ 0 0 148 -3,-0.9 -3,-0.1 1,-0.2 -5,-0.0 0.683 82.5 78.5 -81.9 -19.4 7.1 19.8 -15.7 21 21 A F G < 0 0 198 -3,-1.0 -1,-0.2 -4,-0.3 -4,-0.0 0.771 360.0 360.0 -59.6 -25.7 9.2 21.3 -12.9 22 22 A G < 0 0 106 -3,-0.5 0, 0.0 -4,-0.3 0, 0.0 0.052 360.0 360.0 -52.2 360.0 10.5 23.8 -15.5