==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-AUG-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 06-JAN-12 2LNY . COMPND 2 MOLECULE: SHB PEPTIDE; . SOURCE 2 ORGANISM_SCIENTIFIC: ARTIFICIAL GENE; . AUTHOR M.WEINGARTH . 20 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2418.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 124 0, 0.0 11,-3.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 106.6 32.8 19.3 47.4 2 2 A A E +A 11 0A 81 9,-0.2 2,-2.0 11,-0.0 9,-0.2 -0.326 360.0 151.7-139.8 61.3 33.8 21.8 44.7 3 3 A A E +A 10 0A 37 7,-1.9 7,-3.7 1,-0.1 2,-0.9 -0.454 17.5 157.5 -88.5 74.7 31.6 24.9 45.2 4 4 A V E +A 9 0A 101 -2,-2.0 5,-0.3 5,-0.3 -1,-0.1 -0.658 7.9 144.4-108.6 77.8 34.2 27.2 43.8 5 5 A A E > -A 8 0A 74 3,-3.0 2,-1.2 -2,-0.9 3,-0.8 -0.377 61.8-117.1-114.3 41.2 32.1 30.1 42.7 6 6 A G T 3 S+ 0 0 74 1,-0.3 3,-0.3 2,-0.0 -1,-0.1 -0.311 110.6 44.0 59.8 -73.0 34.7 32.9 43.5 7 7 A L T 3 S+ 0 0 187 -2,-1.2 2,-0.4 1,-0.3 -1,-0.3 0.649 125.7 38.9 -73.7 -25.4 32.9 34.9 46.2 8 8 A Y E < S+A 5 0A 139 -3,-0.8 -3,-3.0 2,-0.0 2,-0.7 -0.895 78.3 173.4-120.9 94.4 32.0 31.5 47.7 9 9 A G E +A 4 0A 59 -2,-0.4 2,-0.5 -3,-0.3 -5,-0.3 -0.884 10.9 155.3 -98.9 73.3 35.1 29.4 47.2 10 10 A L E +A 3 0A 64 -7,-3.7 -7,-1.9 -2,-0.7 2,-0.4 -0.869 7.1 160.8-114.6 97.1 34.5 26.1 49.0 11 11 A G E +A 2 0A 51 -2,-0.5 2,-0.3 -9,-0.2 -9,-0.2 -0.950 5.4 153.3-119.5 129.9 36.5 23.1 47.7 12 12 A E - 0 0 115 -11,-3.6 2,-0.4 -2,-0.4 -9,-0.0 -0.906 36.1-135.5-166.3 119.9 37.1 19.8 49.7 13 13 A D - 0 0 112 -2,-0.3 -2,-0.0 1,-0.1 -11,-0.0 -0.687 17.0-177.3 -72.4 117.2 37.8 16.2 49.0 14 14 A R + 0 0 197 -2,-0.4 2,-0.1 2,-0.0 -1,-0.1 -0.545 19.2 167.9-109.6 61.1 35.8 13.9 51.3 15 15 A Q - 0 0 103 1,-0.1 2,-2.6 0, 0.0 -2,-0.0 -0.494 49.4-102.7 -69.3 157.5 37.1 10.5 50.1 16 16 A H >> - 0 0 128 -2,-0.1 3,-0.9 4,-0.1 4,-0.7 -0.285 44.8-152.1 -90.5 70.1 36.3 7.4 52.2 17 17 A R T 34 - 0 0 179 -2,-2.6 -1,-0.1 1,-0.2 0, 0.0 -0.074 65.4 -15.3 -50.3 108.4 39.7 7.2 53.9 18 18 A K T 34 S- 0 0 201 1,-0.1 -1,-0.2 2,-0.1 -2,-0.0 0.849 133.5 -36.2 62.8 66.7 40.6 3.6 54.8 19 19 A K T <4 0 0 215 -3,-0.9 -2,-0.2 1,-0.2 -1,-0.1 0.991 360.0 360.0 39.3 91.6 37.2 1.9 54.5 20 20 A Q < 0 0 177 -4,-0.7 -1,-0.2 0, 0.0 -4,-0.1 -0.953 360.0 360.0-122.7 360.0 34.6 4.5 55.7