==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION/DNA 02-FEB-10 3LNQ . COMPND 2 MOLECULE: HOMEOBOX PROTEIN ARISTALESS; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR Y.TAKAMURA,K.MIYAZONO,K.NAGATA,K.SAIGO,T.KOJIMA,M.TANOKURA . 58 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4695.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 65.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 60.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 87 A R 0 0 309 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 115.4 -4.2 24.9 -8.4 2 88 A Y - 0 0 176 2,-0.0 2,-0.4 1,-0.0 0, 0.0 -0.510 360.0-169.2 -67.6 138.0 -7.9 25.0 -9.5 3 89 A R - 0 0 220 -2,-0.2 2,-0.3 2,-0.0 -1,-0.0 -0.991 20.5-124.8-131.1 129.8 -9.9 22.0 -8.3 4 90 A T - 0 0 29 -2,-0.4 2,-0.8 1,-0.1 -2,-0.0 -0.521 11.9-152.0 -71.7 130.8 -13.4 21.2 -9.5 5 91 A T - 0 0 125 -2,-0.3 2,-0.1 0, 0.0 -1,-0.1 -0.918 21.9-145.8 -98.3 102.1 -16.0 20.8 -6.9 6 92 A F - 0 0 55 -2,-0.8 2,-0.1 1,-0.1 32,-0.0 -0.449 9.9-125.4 -71.4 139.8 -18.5 18.5 -8.6 7 93 A T > - 0 0 73 -2,-0.1 4,-2.8 1,-0.1 5,-0.2 -0.474 26.6-108.6 -74.9 157.8 -22.2 18.9 -7.7 8 94 A S H > S+ 0 0 91 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.917 122.7 54.8 -52.5 -41.5 -24.2 15.9 -6.5 9 95 A F H > S+ 0 0 93 2,-0.2 4,-2.3 1,-0.2 5,-0.3 0.947 107.2 46.2 -55.0 -56.2 -25.9 16.0 -9.9 10 96 A Q H > S+ 0 0 27 1,-0.2 4,-2.6 2,-0.2 -2,-0.2 0.953 114.9 50.7 -52.7 -47.2 -22.6 15.8 -11.8 11 97 A L H X S+ 0 0 67 -4,-2.8 4,-2.3 1,-0.2 -2,-0.2 0.883 109.1 47.0 -60.8 -46.4 -21.5 13.0 -9.5 12 98 A E H X S+ 0 0 107 -4,-3.0 4,-2.2 1,-0.2 -1,-0.2 0.907 114.7 48.3 -64.9 -38.8 -24.6 10.8 -9.8 13 99 A E H X S+ 0 0 8 -4,-2.3 4,-2.2 -5,-0.2 -2,-0.2 0.873 109.6 51.8 -66.8 -38.9 -24.6 11.2 -13.6 14 100 A L H X S+ 0 0 0 -4,-2.6 4,-1.4 -5,-0.3 -2,-0.2 0.947 112.2 47.2 -60.7 -45.0 -20.8 10.3 -13.8 15 101 A E H X S+ 0 0 67 -4,-2.3 4,-1.5 1,-0.2 -2,-0.2 0.873 110.5 50.9 -65.3 -40.4 -21.5 7.2 -11.7 16 102 A K H X S+ 0 0 97 -4,-2.2 4,-1.6 1,-0.2 -1,-0.2 0.874 109.8 51.1 -63.4 -39.0 -24.5 6.2 -13.9 17 103 A A H X S+ 0 0 4 -4,-2.2 4,-2.1 1,-0.2 -1,-0.2 0.826 107.7 54.9 -63.0 -30.0 -22.3 6.6 -16.9 18 104 A F H < S+ 0 0 6 -4,-1.4 -2,-0.2 2,-0.2 -1,-0.2 0.811 104.2 50.7 -78.6 -33.3 -19.7 4.4 -15.2 19 105 A S H < S+ 0 0 99 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.887 108.9 54.2 -69.0 -43.5 -22.1 1.4 -14.6 20 106 A R H < S- 0 0 164 -4,-1.6 2,-0.3 1,-0.2 -2,-0.2 0.944 134.0 -20.7 -51.5 -54.6 -23.0 1.7 -18.3 21 107 A T < - 0 0 58 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.1 -0.953 42.5-145.2-160.9 144.2 -19.3 1.4 -19.3 22 108 A H S S+ 0 0 51 -2,-0.3 29,-0.1 1,-0.3 -1,-0.1 0.719 103.9 40.9 -75.8 -20.9 -15.9 1.9 -17.7 23 109 A Y S S- 0 0 146 -5,-0.1 -1,-0.3 28,-0.0 2,-0.1 -0.681 80.4-169.0-130.6 74.1 -14.5 3.1 -21.0 24 110 A P - 0 0 11 0, 0.0 23,-0.0 0, 0.0 -6,-0.0 -0.427 22.7-117.6 -69.2 138.1 -17.0 5.4 -22.7 25 111 A D > - 0 0 93 -2,-0.1 4,-2.0 1,-0.1 5,-0.1 -0.005 34.1 -94.4 -60.2 173.2 -16.4 6.4 -26.4 26 112 A V H > S+ 0 0 92 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.858 124.5 50.0 -60.0 -40.2 -15.9 10.1 -27.5 27 113 A F H > S+ 0 0 110 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.879 109.5 49.1 -69.5 -45.3 -19.5 10.6 -28.4 28 114 A T H > S+ 0 0 45 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.911 114.0 48.9 -57.8 -44.2 -20.8 9.2 -25.1 29 115 A R H X S+ 0 0 39 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.891 112.5 45.0 -67.0 -45.0 -18.3 11.5 -23.3 30 116 A E H X S+ 0 0 97 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.864 112.9 52.3 -70.0 -34.5 -19.3 14.6 -25.3 31 117 A E H X S+ 0 0 118 -4,-2.5 4,-1.6 2,-0.2 -2,-0.2 0.906 111.8 46.1 -63.7 -42.5 -23.0 13.9 -24.8 32 118 A L H X S+ 0 0 14 -4,-2.3 4,-2.9 2,-0.2 6,-0.2 0.884 109.3 55.5 -64.9 -41.9 -22.4 13.6 -21.1 33 119 A A H X>S+ 0 0 13 -4,-2.3 4,-1.3 1,-0.2 5,-0.8 0.905 108.8 46.9 -57.3 -45.9 -20.4 16.8 -21.1 34 120 A M H <5S+ 0 0 170 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.865 115.1 48.9 -61.8 -38.0 -23.3 18.7 -22.7 35 121 A K H <5S+ 0 0 123 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.939 121.5 28.9 -67.7 -49.1 -25.7 17.2 -20.2 36 122 A I H <5S- 0 0 9 -4,-2.9 -1,-0.2 2,-0.1 -2,-0.2 0.335 102.4-115.0-107.5 7.2 -23.8 17.8 -17.0 37 123 A G T <5S+ 0 0 61 -4,-1.3 2,-0.3 1,-0.2 -3,-0.2 0.795 72.5 121.4 67.2 30.4 -21.8 21.0 -17.7 38 124 A L < - 0 0 17 -5,-0.8 -1,-0.2 -6,-0.2 -2,-0.1 -0.867 65.7-107.1-115.1 156.6 -18.3 19.5 -17.5 39 125 A T > - 0 0 61 -2,-0.3 4,-1.6 1,-0.1 5,-0.1 -0.458 28.2-118.3 -73.4 155.3 -15.6 19.5 -20.1 40 126 A E H > S+ 0 0 74 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.868 115.4 58.7 -57.5 -41.5 -14.8 16.1 -21.8 41 127 A A H > S+ 0 0 59 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.888 105.6 46.5 -55.3 -45.9 -11.3 16.4 -20.4 42 128 A R H > S+ 0 0 106 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.826 112.9 50.2 -69.4 -32.6 -12.6 16.6 -16.8 43 129 A I H X S+ 0 0 0 -4,-1.6 4,-2.5 2,-0.2 -2,-0.2 0.948 109.4 51.3 -66.1 -48.2 -14.9 13.6 -17.4 44 130 A Q H X S+ 0 0 82 -4,-3.2 4,-2.3 1,-0.2 -2,-0.2 0.924 112.9 46.3 -52.1 -47.1 -12.0 11.7 -18.9 45 131 A V H X S+ 0 0 70 -4,-2.3 4,-2.5 1,-0.2 5,-0.3 0.933 110.8 51.0 -65.4 -47.6 -10.0 12.5 -15.7 46 132 A W H X S+ 0 0 29 -4,-2.6 4,-2.1 1,-0.2 -1,-0.2 0.863 111.7 50.0 -53.6 -38.6 -12.9 11.6 -13.4 47 133 A F H X S+ 0 0 4 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.896 107.2 53.1 -72.5 -38.5 -13.1 8.3 -15.3 48 134 A Q H X S+ 0 0 98 -4,-2.3 4,-1.7 1,-0.2 -2,-0.2 0.916 114.9 41.4 -58.7 -45.3 -9.4 7.7 -15.0 49 135 A N H X S+ 0 0 106 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.827 113.2 53.8 -74.9 -29.4 -9.7 8.1 -11.2 50 136 A R H X S+ 0 0 43 -4,-2.1 4,-2.8 -5,-0.3 -2,-0.2 0.929 108.9 48.7 -71.2 -40.6 -12.9 6.2 -11.0 51 137 A R H X S+ 0 0 39 -4,-2.6 4,-2.8 2,-0.2 -2,-0.2 0.886 110.7 49.7 -66.1 -40.4 -11.4 3.2 -12.8 52 138 A A H X S+ 0 0 39 -4,-1.7 4,-2.1 2,-0.2 -1,-0.2 0.886 113.1 47.8 -65.0 -38.4 -8.3 3.2 -10.5 53 139 A K H X S+ 0 0 134 -4,-1.9 4,-1.4 2,-0.2 -2,-0.2 0.957 113.4 47.1 -64.1 -50.4 -10.5 3.3 -7.4 54 140 A W H < S+ 0 0 92 -4,-2.8 3,-0.4 1,-0.2 -2,-0.2 0.919 111.5 51.6 -56.5 -48.2 -12.7 0.5 -8.8 55 141 A R H >< S+ 0 0 127 -4,-2.8 3,-1.5 1,-0.2 -1,-0.2 0.907 105.7 55.4 -52.1 -49.8 -9.7 -1.6 -9.7 56 142 A K H 3< S+ 0 0 171 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.779 93.4 68.5 -62.1 -31.7 -8.2 -1.2 -6.1 57 143 A Q T 3< 0 0 116 -4,-1.4 -1,-0.3 -3,-0.4 -2,-0.1 0.192 360.0 360.0 -80.7 21.1 -11.4 -2.6 -4.5 58 144 A E < 0 0 161 -3,-1.5 -2,-0.1 0, 0.0 -3,-0.1 -0.091 360.0 360.0-128.8 360.0 -10.5 -5.9 -6.0