==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 24-JAN-12 2LOJ . COMPND 2 MOLECULE: PUTATIVE CYTOPLASMIC PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SE . AUTHOR B.WU,A.YEE,S.HOULISTON,M.GARCIA,A.SAVCHENKO,C.H.ARROWSMITH,N . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6566.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 49.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 6.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 20.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 240 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 95.8 2.6 0.6 -0.7 2 2 A S - 0 0 126 1,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.406 360.0 -96.9 -82.6 162.4 5.4 3.1 -1.1 3 3 A R - 0 0 239 -2,-0.1 2,-0.4 3,-0.0 -1,-0.1 -0.604 25.8-142.9 -79.1 136.6 9.2 2.4 -1.3 4 4 A M - 0 0 151 -2,-0.3 2,-0.4 1,-0.0 -1,-0.0 -0.862 41.9 -91.8 -94.3 139.7 11.4 2.7 1.9 5 5 A D - 0 0 151 -2,-0.4 2,-0.2 1,-0.0 -1,-0.0 -0.364 42.9-163.1 -65.8 110.3 14.9 4.1 1.0 6 6 A N + 0 0 139 -2,-0.4 -1,-0.0 2,-0.0 -3,-0.0 -0.526 58.0 59.6 -82.8 162.5 17.4 1.3 0.3 7 7 A T + 0 0 140 -2,-0.2 2,-0.2 2,-0.1 -2,-0.0 0.742 66.3 164.6 73.2 114.8 21.2 2.1 0.4 8 8 A E - 0 0 173 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.653 42.9 -49.7-141.2-171.7 22.4 3.5 3.8 9 9 A L - 0 0 156 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 -0.538 65.6-111.5 -71.2 138.5 25.5 4.1 6.0 10 10 A P - 0 0 124 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.112 35.0 -87.5 -70.1 168.5 27.9 1.0 6.2 11 11 A H - 0 0 175 1,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.266 64.9 -65.3 -70.2 158.6 28.7 -1.2 9.2 12 12 A P - 0 0 130 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 -0.159 53.5-141.3 -48.2 135.2 31.5 -0.2 11.8 13 13 A K - 0 0 149 -3,-0.1 2,-1.1 1,-0.0 0, 0.0 -0.555 30.2 -89.9 -94.7 160.0 35.1 -0.3 10.4 14 14 A E + 0 0 147 -2,-0.2 -1,-0.0 1,-0.2 3,-0.0 -0.649 61.2 150.1 -69.9 95.4 38.3 -1.5 12.2 15 15 A I + 0 0 154 -2,-1.1 2,-0.3 0, 0.0 -1,-0.2 -0.035 56.0 70.3-117.2 23.1 39.4 1.8 13.8 16 16 A D + 0 0 106 2,-0.0 0, 0.0 1,-0.0 0, 0.0 -0.996 48.8 176.5-143.0 139.7 41.2 0.0 16.8 17 17 A N + 0 0 142 -2,-0.3 2,-0.7 2,-0.1 -1,-0.0 -0.062 23.2 145.9-140.9 31.8 44.4 -2.1 16.7 18 18 A E - 0 0 161 1,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.656 42.6-144.1 -72.4 111.8 45.1 -3.1 20.4 19 19 A T - 0 0 129 -2,-0.7 2,-0.1 1,-0.1 -2,-0.1 -0.618 11.9-112.2 -84.9 140.8 46.6 -6.6 19.9 20 20 A L - 0 0 165 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 -0.392 34.0-114.4 -68.5 150.1 46.0 -9.5 22.3 21 21 A L - 0 0 157 1,-0.1 -1,-0.1 -2,-0.1 0, 0.0 -0.488 39.8 -84.6 -87.0 151.9 49.0 -10.7 24.4 22 22 A P - 0 0 79 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.128 31.3-119.0 -54.2 152.1 50.6 -14.3 24.0 23 23 A A S S- 0 0 36 1,-0.3 2,-0.3 17,-0.1 16,-0.1 0.823 96.9 -12.3 -59.7 -33.1 49.0 -17.4 25.9 24 24 A A - 0 0 18 16,-0.0 -1,-0.3 28,-0.0 16,-0.1 -0.949 49.7-145.5-162.0 155.4 52.5 -17.6 27.6 25 25 A E + 0 0 156 -2,-0.3 2,-1.0 -3,-0.1 15,-0.1 0.030 59.9 128.9-108.5 23.3 56.0 -16.1 27.2 26 26 A R - 0 0 171 13,-0.2 15,-2.4 1,-0.0 2,-1.3 -0.698 44.5-161.8 -88.6 96.0 57.6 -19.4 28.4 27 27 A R E +a 41 0A 134 -2,-1.0 2,-0.3 13,-0.2 15,-0.2 -0.696 24.5 163.5 -78.6 90.2 60.3 -20.5 25.8 28 28 A V E -a 42 0A 43 13,-2.2 15,-2.5 -2,-1.3 12,-0.0 -0.845 43.7 -89.9-103.3 152.8 60.7 -24.2 26.7 29 29 A N E > -a 43 0A 85 -2,-0.3 3,-1.9 13,-0.2 15,-0.2 -0.111 44.5 -96.0 -62.0 157.1 62.4 -26.7 24.3 30 30 A S G > S+ 0 0 40 13,-1.8 3,-1.7 1,-0.3 14,-0.1 0.733 119.4 61.9 -44.4 -40.6 60.4 -28.7 21.7 31 31 A Q G 3 S+ 0 0 145 1,-0.3 4,-0.3 2,-0.1 -1,-0.3 0.796 104.4 50.1 -64.2 -27.7 59.9 -31.9 23.9 32 32 A A G < S+ 0 0 34 -3,-1.9 -1,-0.3 1,-0.2 -2,-0.2 -0.072 71.2 140.0 -98.8 30.9 58.0 -29.8 26.5 33 33 A L S < S- 0 0 77 -3,-1.7 7,-0.5 1,-0.2 18,-0.2 0.672 92.9 -9.6 -48.3 -27.7 55.7 -28.4 23.6 34 34 A L S >> S+ 0 0 35 -3,-0.3 4,-2.3 5,-0.1 3,-0.9 0.434 85.2 169.3-132.0 -53.3 52.7 -28.7 26.1 35 35 A G T 34 S- 0 0 53 -4,-0.3 -2,-0.0 1,-0.2 5,-0.0 -0.397 74.5 -45.2 64.2-146.5 53.9 -30.7 29.1 36 36 A P T 34 S+ 0 0 148 0, 0.0 -1,-0.2 0, 0.0 -4,-0.0 0.462 138.9 67.7 -86.3 -2.9 51.4 -30.6 32.1 37 37 A D T <4 S- 0 0 86 -3,-0.9 -2,-0.2 1,-0.1 -3,-0.0 0.962 80.4-157.9 -80.7 -60.1 51.0 -26.8 31.4 38 38 A G < + 0 0 8 -4,-2.3 15,-0.9 14,-0.1 2,-0.4 -0.024 69.7 64.6 106.3 -28.9 49.3 -26.8 27.9 39 39 A K E + B 0 52A 87 13,-0.3 2,-0.3 -5,-0.2 13,-0.2 -0.845 65.3 126.5-134.4 95.4 50.3 -23.3 26.7 40 40 A V E - B 0 51A 6 11,-2.1 11,-2.4 -7,-0.5 2,-0.5 -0.943 58.8-101.9-143.1 161.4 54.0 -22.6 26.1 41 41 A I E -aB 27 50A 11 -15,-2.4 -13,-2.2 -2,-0.3 2,-0.5 -0.810 36.7-132.1 -89.7 124.8 56.4 -21.3 23.4 42 42 A I E -aB 28 49A 4 7,-2.6 7,-1.3 -2,-0.5 2,-0.7 -0.694 11.3-154.0 -81.9 119.4 58.3 -24.1 21.6 43 43 A D E +aB 29 48A 77 -15,-2.5 -13,-1.8 -2,-0.5 2,-0.3 -0.880 44.1 124.1 -96.2 109.4 62.0 -23.5 21.3 44 44 A H E > + B 0 47A 85 3,-1.8 3,-1.5 -2,-0.7 -2,-0.0 -0.960 52.4 25.7-165.4 148.3 63.2 -25.5 18.2 45 45 A N T 3 S- 0 0 112 1,-0.3 3,-0.1 -2,-0.3 -2,-0.0 0.678 126.6 -62.8 69.0 23.5 65.0 -25.1 14.8 46 46 A G T 3 S+ 0 0 88 1,-0.3 -1,-0.3 0, 0.0 2,-0.2 0.748 124.9 85.5 69.5 24.3 66.9 -22.0 16.1 47 47 A Q E < S-B 44 0A 92 -3,-1.5 -3,-1.8 2,-0.0 -1,-0.3 -0.768 70.3-129.5-138.6 178.0 63.4 -20.4 16.5 48 48 A E E +B 43 0A 82 -5,-0.2 2,-0.2 -2,-0.2 -5,-0.2 -0.970 20.9 175.1-134.3 149.3 60.5 -20.0 18.9 49 49 A Y E -B 42 0A 47 -7,-1.3 -7,-2.6 -2,-0.3 2,-0.4 -0.845 30.0-122.0-158.8 125.6 56.6 -20.6 18.3 50 50 A L E -BC 41 62A 14 12,-1.4 12,-2.4 -9,-0.3 2,-0.5 -0.508 26.7-176.9 -75.2 115.8 53.7 -20.5 20.8 51 51 A L E +BC 40 61A 16 -11,-2.4 -11,-2.1 -2,-0.4 2,-0.3 -0.980 13.0 173.4-110.0 124.4 51.6 -23.8 20.9 52 52 A R E -BC 39 60A 82 8,-1.5 8,-2.0 -2,-0.5 2,-0.7 -0.936 36.2-122.7-129.9 152.2 48.7 -23.6 23.3 53 53 A K E - C 0 59A 113 -15,-0.9 2,-0.3 -2,-0.3 6,-0.2 -0.881 30.2-145.3 -90.6 108.3 45.7 -25.7 24.2 54 54 A T E >> - C 0 58A 22 4,-2.0 3,-2.2 -2,-0.7 4,-1.4 -0.645 16.3-126.4 -72.6 136.6 42.5 -23.6 23.5 55 55 A Q T 34 S+ 0 0 200 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.740 106.7 73.0 -60.2 -27.2 39.8 -24.4 26.2 56 56 A A T 34 S- 0 0 96 1,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.691 127.8 -93.5 -58.5 -22.8 37.3 -25.1 23.3 57 57 A G T <4 S+ 0 0 63 -3,-2.2 2,-0.2 1,-0.3 -2,-0.2 0.750 87.0 104.7 113.5 41.3 39.4 -28.3 22.9 58 58 A K E < -C 54 0A 142 -4,-1.4 -4,-2.0 2,-0.0 2,-0.3 -0.803 62.9-113.7-137.0 172.7 42.1 -27.5 20.2 59 59 A L E -C 53 0A 101 -6,-0.2 2,-0.4 -2,-0.2 -6,-0.2 -0.869 22.2-160.9-106.8 148.3 45.8 -26.8 19.7 60 60 A L E -C 52 0A 81 -8,-2.0 -8,-1.5 -2,-0.3 2,-0.5 -0.908 2.6-168.3-137.9 99.6 47.0 -23.3 18.4 61 61 A L E +C 51 0A 100 -2,-0.4 2,-0.4 -10,-0.2 -10,-0.2 -0.843 18.1 177.8 -89.7 122.5 50.5 -23.1 16.8 62 62 A T E C 50 0A 53 -12,-2.4 -12,-1.4 -2,-0.5 -2,-0.0 -0.994 360.0 360.0-135.2 131.7 51.4 -19.3 16.3 63 63 A K 0 0 190 -2,-0.4 -13,-0.2 -14,-0.2 -1,-0.2 0.837 360.0 360.0 -89.4 360.0 54.6 -17.5 15.0