==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=16-SEP-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN FIBRIL 04-FEB-10 3LOZ . COMPND 2 MOLECULE: BETA-2-MICROGLOBULIN SEGMENT LSFSKD; . SOURCE 2 SYNTHETIC: YES . AUTHOR C.LIU,M.SAWAYA,D.EISENBERG . 24 4 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2693.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 33.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 120 0, 0.0 11,-2.6 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 127.8 3.0 -0.9 16.0 2 2 A S E -A 11 0A 101 9,-0.2 2,-0.3 2,-0.0 9,-0.2 -0.999 360.0-175.4-145.7 143.4 2.5 0.2 12.4 3 3 A F E +A 10 0A 93 7,-3.1 7,-2.2 -2,-0.3 2,-0.3 -0.988 6.1 175.4-135.1 139.5 2.8 -1.2 8.9 4 4 A S E -A 9 0A 83 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.998 9.7-175.7-143.3 149.0 2.4 0.2 5.4 5 5 A K 0 0 138 3,-2.5 -2,-0.0 -2,-0.3 0, 0.0 -0.995 360.0 360.0-137.4 141.2 2.8 -0.8 1.8 6 6 A D 0 0 218 -2,-0.3 -2,-0.0 3,-0.0 3,-0.0 -0.291 360.0 360.0 -91.9 360.0 2.5 1.4 -1.3 7 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 8 1 B L 0 0 129 0, 0.0 -3,-2.5 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 127.1 -2.3 -1.1 2.5 9 2 B S E -A 4 0A 93 -5,-0.2 2,-0.3 2,-0.0 -5,-0.2 -0.999 360.0-177.5-150.1 145.6 -1.9 -0.1 6.2 10 3 B F E +A 3 0A 31 -7,-2.2 -7,-3.1 -2,-0.3 2,-0.3 -0.992 9.3 175.2-143.1 138.5 -2.3 -1.5 9.7 11 4 B S E +A 2 0A 84 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.993 6.3 174.5-143.3 143.9 -1.7 0.1 13.1 12 5 B K 0 0 57 -11,-2.6 -2,-0.0 -2,-0.3 0, 0.0 -0.936 360.0 360.0-148.6 123.4 -2.2 -0.9 16.7 13 6 B D 0 0 197 -2,-0.3 -2,-0.0 -11,-0.0 -11,-0.0 -0.830 360.0 360.0-109.6 360.0 -1.2 1.1 19.9 14 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 15 1 C L 0 0 138 0, 0.0 11,-2.3 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 128.3 -7.0 -9.9 20.4 16 2 C S E -B 25 0B 96 9,-0.2 2,-0.3 2,-0.0 9,-0.2 -0.999 360.0-176.9-150.4 149.8 -6.5 -10.7 16.7 17 3 C F E +B 24 0B 101 7,-2.0 7,-2.9 -2,-0.3 2,-0.3 -0.991 9.7 174.1-143.1 138.9 -7.0 -9.4 13.2 18 4 C S E +B 23 0B 82 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.995 7.2 177.2-144.8 148.8 -6.4 -10.9 9.8 19 5 C K 0 0 121 3,-2.7 -2,-0.0 -2,-0.3 0, 0.0 -0.931 360.0 360.0-150.4 121.9 -7.0 -10.0 6.1 20 6 C D 0 0 188 -2,-0.3 -1,-0.1 3,-0.0 3,-0.0 0.661 360.0 360.0-109.2 360.0 -6.0 -12.0 3.0 21 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 22 1 D L 0 0 70 0, 0.0 -3,-2.7 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 116.5 -1.8 -9.6 6.9 23 2 D S E -B 18 0B 105 -5,-0.2 2,-0.3 -3,-0.0 -5,-0.2 -0.996 360.0-176.9-137.9 143.0 -2.1 -11.1 10.4 24 3 D F E +B 17 0B 32 -7,-2.9 -7,-2.0 -2,-0.3 2,-0.3 -0.997 4.2 175.1-139.4 141.3 -2.0 -9.6 14.0 25 4 D S E -B 16 0B 85 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.997 8.1-179.0-144.9 145.1 -2.2 -11.2 17.5 26 5 D K 0 0 115 -11,-2.3 -2,-0.0 -2,-0.3 0, 0.0 -0.984 360.0 360.0-141.8 136.8 -1.9 -10.1 21.1 27 6 D D 0 0 216 -2,-0.3 -2,-0.0 -11,-0.0 -11,-0.0 -0.195 360.0 360.0 -89.6 360.0 -2.2 -12.2 24.2