==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-MAY-02 1LPL . COMPND 2 MOLECULE: HYPOTHETICAL 25.4 KDA PROTEIN F53F4.3 IN . SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; . AUTHOR S.LI,J.FINLEY,Z.-J.LIU,S.H.QIU,C.H.LUAN,M.CARSON,J.TSAO, . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6101.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 58.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 28.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 135 A S 0 0 129 0, 0.0 42,-0.1 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 -29.4 -10.3 20.0 57.5 2 136 A D > - 0 0 79 1,-0.1 4,-0.6 42,-0.1 42,-0.1 -0.203 360.0-144.5 -68.7 156.1 -8.7 17.7 54.9 3 137 A K H > S+ 0 0 146 2,-0.2 4,-2.3 3,-0.1 -1,-0.1 0.830 103.8 60.6 -82.1 -37.0 -8.1 14.0 55.3 4 138 A L H > S+ 0 0 79 1,-0.3 4,-3.0 2,-0.2 5,-0.2 0.894 103.5 46.7 -56.3 -46.2 -5.0 14.6 53.2 5 139 A N H > S+ 0 0 14 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.825 111.1 54.5 -66.8 -28.9 -3.5 17.1 55.7 6 140 A E H X S+ 0 0 104 -4,-0.6 4,-0.8 2,-0.2 -2,-0.2 0.870 112.7 42.6 -69.9 -39.6 -4.4 14.7 58.4 7 141 A E H >X S+ 0 0 140 -4,-2.3 3,-1.7 2,-0.2 4,-0.6 0.982 112.2 50.6 -70.0 -59.8 -2.5 12.0 56.6 8 142 A A H 3< S+ 0 0 37 -4,-3.0 3,-0.2 1,-0.3 -1,-0.2 0.726 111.0 53.0 -51.3 -25.0 0.6 14.0 55.6 9 143 A A H >< S+ 0 0 16 -4,-1.1 3,-1.2 -5,-0.2 -1,-0.3 0.700 84.0 85.8 -85.9 -24.2 0.8 15.2 59.3 10 144 A K H << S+ 0 0 146 -3,-1.7 -1,-0.2 -4,-0.8 -2,-0.2 0.877 103.1 28.8 -42.5 -50.1 0.9 11.7 60.8 11 145 A N T 3< S+ 0 0 131 -4,-0.6 2,-0.7 -3,-0.2 -1,-0.3 0.403 90.8 113.1 -96.8 1.7 4.6 11.4 60.4 12 146 A I < - 0 0 10 -3,-1.2 2,-0.4 -4,-0.1 -3,-0.0 -0.667 46.6-175.2 -81.4 118.6 5.7 15.0 60.6 13 147 A M > - 0 0 103 -2,-0.7 3,-2.3 21,-0.0 19,-0.3 -0.923 31.6-107.4-118.5 141.4 7.7 15.5 63.7 14 148 A V T 3 S+ 0 0 94 -2,-0.4 19,-0.2 1,-0.3 3,-0.1 -0.338 110.4 34.5 -58.3 136.6 9.1 18.7 65.3 15 149 A G T 3 S+ 0 0 37 17,-2.8 -1,-0.3 1,-0.4 18,-0.1 0.068 89.2 130.3 101.1 -24.2 12.9 18.6 64.8 16 150 A N < - 0 0 48 -3,-2.3 16,-3.2 15,-0.1 -1,-0.4 -0.312 60.3-125.0 -64.7 141.9 12.6 16.9 61.4 17 151 A R E +A 31 0A 66 68,-0.4 68,-2.7 14,-0.2 2,-0.3 -0.592 44.1 173.2 -79.8 152.4 14.4 18.4 58.4 18 152 A C E -AB 30 84A 0 12,-2.3 12,-1.8 69,-0.3 2,-0.4 -0.963 36.1-129.6-156.5 170.8 12.0 19.1 55.6 19 153 A E E -AB 29 83A 27 64,-2.4 64,-2.2 -2,-0.3 2,-0.5 -0.997 22.6-154.7-131.0 123.6 11.3 20.6 52.2 20 154 A V E +AB 28 82A 0 8,-3.6 8,-2.7 -2,-0.4 2,-0.4 -0.864 14.9 175.6-104.2 130.5 8.4 23.0 51.7 21 155 A T - 0 0 53 60,-2.5 2,-0.8 -2,-0.5 6,-0.1 -0.798 6.1-180.0-132.7 90.0 6.7 23.4 48.3 22 156 A V > - 0 0 47 -2,-0.4 3,-0.9 4,-0.2 2,-0.2 -0.808 56.2 -57.7-100.2 107.9 3.7 25.7 48.5 23 157 A G T 3 S- 0 0 74 -2,-0.8 0, 0.0 1,-0.2 0, 0.0 -0.439 116.5 -13.1 68.9-128.6 2.0 26.2 45.1 24 158 A A T 3 S+ 0 0 111 -2,-0.2 -1,-0.2 2,-0.1 -2,-0.0 0.870 105.1 118.0 -74.8 -38.4 4.2 27.6 42.4 25 159 A Q S < S- 0 0 78 -3,-0.9 2,-0.3 1,-0.1 3,-0.1 0.300 74.3 -98.9 -29.5 150.6 7.0 28.6 44.8 26 160 A M - 0 0 158 1,-0.1 -4,-0.2 -5,-0.1 -1,-0.1 -0.583 51.6 -91.0 -76.8 135.8 10.5 27.2 44.6 27 161 A A - 0 0 39 -2,-0.3 2,-0.4 -6,-0.1 -6,-0.2 -0.161 46.1-164.8 -49.5 134.9 11.2 24.3 47.1 28 162 A R E -A 20 0A 16 -8,-2.7 -8,-3.6 -3,-0.1 2,-0.2 -0.989 3.8-151.1-128.7 135.6 12.6 25.6 50.4 29 163 A R E +A 19 0A 48 -2,-0.4 22,-2.2 -10,-0.3 23,-0.4 -0.687 33.7 119.9-104.7 159.3 14.3 23.5 53.1 30 164 A G E -AC 18 50A 0 -12,-1.8 -12,-2.3 20,-0.3 2,-0.4 -0.889 57.5 -66.9-179.7-153.6 14.4 24.0 56.8 31 165 A E E -AC 17 49A 80 18,-2.6 18,-3.3 -2,-0.3 2,-0.4 -0.963 42.3-109.8-128.3 140.9 13.4 22.3 60.1 32 166 A V E + C 0 48A 0 -16,-3.2 -17,-2.8 -2,-0.4 16,-0.2 -0.551 38.1 169.6 -69.4 122.2 10.0 21.6 61.5 33 167 A A E + 0 0 20 14,-2.9 2,-0.3 -2,-0.4 15,-0.2 0.551 63.9 16.9-110.4 -10.1 9.5 23.8 64.5 34 168 A Y E - C 0 47A 59 13,-1.6 13,-2.4 -21,-0.1 2,-0.4 -0.970 54.3-173.8-162.2 140.4 5.8 23.2 65.1 35 169 A V E + C 0 46A 44 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.976 49.4 32.0-141.1 127.2 3.0 20.7 64.1 36 170 A G E S- C 0 45A 18 9,-2.1 9,-2.2 -2,-0.4 2,-0.1 -0.899 87.2 -9.5 136.0-164.0 -0.7 21.0 65.0 37 171 A A - 0 0 70 -2,-0.3 2,-0.2 7,-0.2 7,-0.1 -0.351 53.3-172.9 -73.8 153.3 -3.6 23.4 65.5 38 172 A T - 0 0 23 3,-0.8 5,-0.1 5,-0.4 -1,-0.0 -0.760 34.1-111.3-133.8-177.1 -3.2 27.2 65.7 39 173 A K S S+ 0 0 167 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.693 105.9 60.5 -91.7 -20.2 -5.3 30.3 66.6 40 174 A F S S+ 0 0 74 1,-0.2 2,-0.3 21,-0.0 -1,-0.1 0.798 116.7 3.8 -82.5 -28.3 -5.3 31.9 63.1 41 175 A K S S- 0 0 106 2,-0.1 -3,-0.8 4,-0.0 -1,-0.2 -0.983 75.2-107.4-158.5 144.2 -7.0 29.1 61.2 42 176 A E S S+ 0 0 131 -2,-0.3 2,-0.1 -3,-0.1 -3,-0.1 -0.150 76.5 42.6 -64.5 165.2 -8.5 25.7 61.8 43 177 A G S S- 0 0 23 -5,-0.1 -5,-0.4 -42,-0.1 2,-0.3 -0.381 99.7 -39.0 93.8-172.3 -6.9 22.4 60.8 44 178 A V - 0 0 21 -7,-0.1 2,-0.3 -42,-0.1 -7,-0.2 -0.728 54.1-171.9 -93.6 141.0 -3.3 21.2 61.1 45 179 A W E -C 36 0A 32 -9,-2.2 -9,-2.1 -2,-0.3 2,-0.5 -0.968 14.7-147.9-130.5 144.6 -0.4 23.6 60.4 46 180 A V E -CD 35 77A 0 31,-3.0 31,-2.1 -2,-0.3 2,-0.5 -0.970 12.1-153.5-114.2 119.5 3.3 22.9 60.1 47 181 A G E -CD 34 76A 0 -13,-2.4 -14,-2.9 -2,-0.5 -13,-1.6 -0.814 16.1-162.0 -91.6 131.0 5.6 25.8 61.3 48 182 A V E -CD 32 75A 0 27,-3.4 27,-1.6 -2,-0.5 2,-0.8 -0.946 20.3-148.8-120.7 136.9 8.9 25.7 59.6 49 183 A K E -CD 31 74A 82 -18,-3.3 -18,-2.6 -2,-0.4 25,-0.2 -0.908 33.8-145.8 -98.7 103.6 12.3 27.3 60.5 50 184 A Y E -C 30 0A 10 23,-3.3 -20,-0.3 -2,-0.8 5,-0.1 -0.310 16.5-131.7 -72.8 155.7 13.8 27.9 57.0 51 185 A D S S+ 0 0 38 -22,-2.2 -21,-0.1 -2,-0.1 -1,-0.1 0.867 96.1 35.0 -73.2 -37.7 17.5 27.8 56.2 52 186 A E S S- 0 0 103 -23,-0.4 2,-2.5 21,-0.1 3,-0.2 -0.698 101.8 -95.4-111.2 167.7 17.3 31.1 54.4 53 187 A P S S+ 0 0 73 0, 0.0 20,-0.2 0, 0.0 21,-0.1 -0.312 84.0 121.4 -79.7 58.9 15.1 34.3 55.2 54 188 A V + 0 0 53 -2,-2.5 19,-0.2 19,-0.1 18,-0.1 0.202 48.1 93.4-106.9 14.4 12.5 33.0 52.7 55 189 A G S S- 0 0 12 17,-3.7 20,-0.2 -3,-0.2 18,-0.1 -0.171 73.6-124.5 -96.9-169.4 9.6 32.9 55.2 56 190 A K S S+ 0 0 160 18,-2.0 2,-0.3 -2,-0.1 19,-0.2 0.436 80.7 27.9-115.5 -7.1 6.8 35.2 56.3 57 191 A N B -E 74 0A 16 17,-2.3 17,-2.6 13,-0.1 16,-0.5 -0.872 65.4-119.8-148.7 179.7 7.3 35.3 60.0 58 192 A D S S- 0 0 44 2,-0.5 11,-1.0 -2,-0.3 3,-0.1 0.002 85.3 -72.1-110.8 25.0 9.6 35.2 63.1 59 193 A G S S+ 0 0 0 1,-0.3 7,-3.1 9,-0.2 8,-1.8 0.291 113.6 89.6 101.4 -7.6 7.7 32.2 64.6 60 194 A S E -F 65 0B 27 5,-0.3 -2,-0.5 6,-0.2 2,-0.4 -0.929 52.3-166.9-125.1 145.9 4.6 34.3 65.6 61 195 A V E > S-F 64 0B 43 3,-2.3 3,-2.6 -2,-0.3 -22,-0.1 -0.994 76.6 -4.9-130.7 137.9 1.4 35.1 63.8 62 196 A A T 3 S- 0 0 95 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.810 131.5 -55.4 50.4 34.5 -1.1 37.8 64.8 63 197 A G T 3 S+ 0 0 77 1,-0.2 2,-0.5 -3,-0.0 -1,-0.3 0.481 112.6 117.1 82.3 -0.4 0.9 38.4 68.0 64 198 A V E < -F 61 0B 46 -3,-2.6 -3,-2.3 0, 0.0 2,-0.5 -0.910 58.8-140.8-103.2 124.7 0.8 34.7 69.1 65 199 A R E +F 60 0B 112 -2,-0.5 -5,-0.3 -5,-0.3 3,-0.1 -0.740 28.8 166.5 -87.2 128.0 4.3 33.1 69.3 66 200 A Y - 0 0 36 -7,-3.1 2,-0.3 -2,-0.5 -6,-0.2 0.731 68.3 -12.3-107.2 -37.1 4.3 29.5 68.2 67 201 A F S S- 0 0 12 -8,-1.8 -1,-0.4 -33,-0.1 2,-0.4 -0.911 73.8 -96.6-153.0 177.4 8.0 29.0 67.8 68 202 A D + 0 0 106 -2,-0.3 2,-0.3 -35,-0.1 -9,-0.2 -0.894 51.4 117.0-113.9 137.8 11.3 30.9 67.8 69 203 A C - 0 0 26 -11,-1.0 5,-0.1 -2,-0.4 3,-0.1 -0.955 60.4 -74.9-177.9 167.0 13.4 32.2 64.9 70 204 A D > - 0 0 113 -2,-0.3 3,-1.9 1,-0.1 4,-0.3 -0.366 66.9 -77.5 -73.2 154.8 14.7 35.3 63.3 71 205 A P T 3 S+ 0 0 85 0, 0.0 -13,-0.2 0, 0.0 -1,-0.1 -0.224 117.9 16.1 -52.4 141.0 12.3 37.5 61.2 72 206 A K T 3 S+ 0 0 109 -3,-0.1 -17,-3.7 2,-0.1 -14,-0.2 0.435 104.7 92.8 72.5 1.2 11.5 36.2 57.7 73 207 A Y S < S+ 0 0 72 -3,-1.9 -23,-3.3 -16,-0.5 2,-0.3 0.437 71.9 73.4-100.8 -3.2 12.8 32.7 58.7 74 208 A G E +DE 49 57A 0 -17,-2.6 -17,-2.3 -4,-0.3 -18,-2.0 -0.820 52.8 173.9-113.7 155.5 9.6 31.1 59.8 75 209 A G E -D 48 0A 4 -27,-1.6 -27,-3.4 -2,-0.3 2,-0.5 -0.990 21.7-145.2-155.1 147.3 6.6 29.9 57.8 76 210 A F E +D 47 0A 30 -2,-0.3 2,-0.3 -29,-0.2 -29,-0.2 -0.976 31.7 159.2-115.3 128.0 3.3 28.1 58.5 77 211 A V E -D 46 0A 13 -31,-2.1 -31,-3.0 -2,-0.5 -2,-0.0 -0.926 44.0 -88.8-140.9 165.2 2.0 25.8 55.8 78 212 A R > - 0 0 45 -2,-0.3 3,-2.2 -33,-0.2 4,-0.2 -0.436 40.4-113.8 -74.2 148.7 -0.4 22.9 55.4 79 213 A P G > S+ 0 0 0 0, 0.0 3,-2.0 0, 0.0 -1,-0.1 0.846 113.1 66.4 -52.7 -34.1 1.0 19.4 56.0 80 214 A V G 3 S+ 0 0 70 1,-0.3 -75,-0.0 3,-0.0 -2,-0.0 0.673 97.5 55.0 -63.2 -14.3 0.4 18.4 52.3 81 215 A D G < S+ 0 0 44 -3,-2.2 -60,-2.5 -61,-0.1 2,-0.4 0.358 97.2 82.2 -98.4 5.4 3.0 21.0 51.3 82 216 A V E < -B 20 0A 14 -3,-2.0 2,-0.5 -62,-0.2 -62,-0.2 -0.946 53.6-170.2-120.9 129.9 5.7 19.5 53.5 83 217 A K E -B 19 0A 114 -64,-2.2 -64,-2.4 -2,-0.4 2,-0.3 -0.961 17.7-155.4-113.7 128.9 8.0 16.6 52.8 84 218 A V E +B 18 0A 51 -2,-0.5 2,-0.3 -66,-0.2 -66,-0.3 -0.801 41.8 70.1-108.2 148.2 10.0 15.4 55.9 85 219 A G S S- 0 0 35 -68,-2.7 2,-1.5 -2,-0.3 -68,-0.4 -0.999 88.9 -8.2 153.8-154.0 13.3 13.6 55.8 86 220 A D + 0 0 147 -2,-0.3 -68,-0.1 -70,-0.1 -2,-0.0 -0.673 68.5 148.7 -84.0 90.3 16.9 13.9 55.0 87 221 A F - 0 0 32 -2,-1.5 -69,-0.3 -57,-0.1 -57,-0.1 -0.789 28.2-165.4-126.4 86.3 16.9 17.3 53.4 88 222 A P - 0 0 74 0, 0.0 2,-0.1 0, 0.0 -59,-0.0 -0.274 37.5 -79.7 -70.6 157.0 20.3 18.9 54.2 89 223 A E - 0 0 113 1,-0.1 2,-1.5 -38,-0.0 -59,-0.0 -0.327 42.3-121.2 -60.3 132.2 20.8 22.6 53.7 90 224 A L + 0 0 122 -3,-0.1 2,-0.3 -2,-0.1 -1,-0.1 -0.562 64.6 123.8 -78.6 93.6 21.4 23.5 50.1 91 225 A S - 0 0 81 -2,-1.5 2,-0.5 0, 0.0 -2,-0.0 -0.996 44.5-157.6-152.0 145.6 24.8 25.2 50.3 92 226 A I + 0 0 119 -2,-0.3 3,-0.2 1,-0.1 -2,-0.0 -0.983 8.0 179.8-125.8 116.5 28.2 24.8 48.8 93 227 A D S S- 0 0 164 -2,-0.5 2,-0.3 1,-0.4 -1,-0.1 0.925 76.3 -16.0 -79.9 -44.1 31.2 26.2 50.7 94 228 A E 0 0 182 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.957 360.0 360.0-160.4 140.2 33.8 25.1 48.1 95 229 A I 0 0 199 -2,-0.3 -3,-0.0 -3,-0.2 0, 0.0 -0.896 360.0 360.0-143.5 360.0 33.7 22.7 45.2