==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-OCT-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 20-FEB-12 2LPY . COMPND 2 MOLECULE: MATRIX PROTEIN P10; . SOURCE 2 ORGANISM_SCIENTIFIC: MASON-PFIZER MONKEY VIRUS; . AUTHOR J.PRCHAL,R.HRABAL . 124 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10525.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 84 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 22 17.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 57 46.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A G > 0 0 100 0, 0.0 3,-2.3 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0-137.7 99.4 12.2 -14.2 2 3 A Q T > + 0 0 182 1,-0.3 3,-2.0 2,-0.2 4,-0.2 0.742 360.0 81.1 -60.0 -21.6 97.1 14.7 -12.4 3 4 A E T >> + 0 0 83 1,-0.3 3,-3.6 2,-0.2 4,-0.8 0.742 62.5 94.0 -56.2 -22.6 96.0 11.7 -10.4 4 5 A L H X> S+ 0 0 98 -3,-2.3 4,-1.5 1,-0.3 3,-0.6 0.774 70.5 72.1 -41.6 -28.5 99.1 12.2 -8.4 5 6 A S H <> S+ 0 0 59 -3,-2.0 4,-1.7 1,-0.3 -1,-0.3 0.880 91.2 55.7 -57.7 -37.0 96.8 14.2 -6.1 6 7 A Q H <> S+ 0 0 85 -3,-3.6 4,-1.9 1,-0.2 -1,-0.3 0.839 100.6 59.7 -64.3 -33.0 95.3 10.9 -5.0 7 8 A H H X S+ 0 0 107 -4,-1.5 4,-1.4 1,-0.2 3,-0.5 0.932 110.8 49.5 -59.8 -44.8 99.2 12.5 -1.5 9 10 A R H 3X S+ 0 0 144 -4,-1.7 4,-4.1 1,-0.2 5,-0.5 0.859 103.2 62.9 -62.3 -33.5 95.8 11.8 -0.0 10 11 A Y H 3X>S+ 0 0 78 -4,-1.9 4,-1.8 3,-0.2 5,-0.6 0.882 98.6 55.3 -60.0 -37.3 96.9 8.2 0.2 11 12 A V H <>S+ 0 0 2 -4,-1.9 5,-1.5 1,-0.2 3,-1.0 0.776 102.8 71.1 -79.9 -28.0 95.1 2.4 10.1 19 20 A K H ><5S+ 0 0 119 -4,-1.4 3,-1.2 1,-0.3 -2,-0.2 0.881 98.5 49.0 -55.3 -39.8 94.9 5.0 12.8 20 21 A T T 3<5S+ 0 0 107 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.700 97.9 69.4 -74.1 -18.2 91.3 3.8 13.6 21 22 A R T < 5S- 0 0 154 -3,-1.0 -1,-0.3 -4,-0.3 -2,-0.2 0.473 134.3 -84.9 -77.2 -0.2 92.6 0.3 13.6 22 23 A G T < 5S+ 0 0 69 -3,-1.2 -3,-0.2 1,-0.3 2,-0.2 0.552 94.6 124.1 106.7 13.6 94.5 1.2 16.8 23 24 A V < - 0 0 10 -5,-1.5 2,-0.4 -4,-0.2 -1,-0.3 -0.547 53.0-131.8-100.9 168.7 97.5 2.6 15.1 24 25 A K - 0 0 182 -2,-0.2 2,-0.4 -3,-0.1 -8,-0.0 -0.973 16.5-174.6-125.5 137.9 99.1 6.1 15.5 25 26 A V + 0 0 34 -2,-0.4 2,-0.2 -9,-0.0 -6,-0.0 -0.906 10.6 172.8-135.6 107.1 100.2 8.4 12.7 26 27 A K >> - 0 0 153 -2,-0.4 3,-3.5 1,-0.1 4,-0.6 -0.664 51.1 -98.0-108.5 165.8 102.1 11.7 13.5 27 28 A Y H >> S+ 0 0 171 1,-0.3 4,-1.6 -2,-0.2 3,-1.1 0.870 125.1 64.4 -48.0 -38.5 103.7 14.3 11.2 28 29 A A H 3> S+ 0 0 37 1,-0.3 4,-2.2 2,-0.2 -1,-0.3 0.755 89.9 70.2 -57.0 -23.1 107.0 12.5 12.1 29 30 A D H <> S+ 0 0 32 -3,-3.5 4,-3.3 1,-0.2 5,-0.5 0.915 99.2 44.5 -62.3 -44.4 105.4 9.5 10.3 30 31 A L H S+ 0 0 43 -3,-1.1 4,-1.9 -4,-0.6 5,-0.8 0.907 109.5 56.8 -67.5 -41.3 105.7 11.3 6.9 31 32 A L H X5S+ 0 0 75 -4,-1.6 4,-0.8 3,-0.2 -2,-0.2 0.925 122.1 26.1 -57.0 -44.6 109.2 12.3 7.7 32 33 A K H X5S+ 0 0 123 -4,-2.2 4,-2.9 3,-0.2 -2,-0.2 0.926 129.1 41.4 -84.3 -50.9 110.3 8.8 8.2 33 34 A F H X5S+ 0 0 53 -4,-3.3 4,-2.4 -5,-0.3 5,-0.3 0.932 118.2 46.2 -63.5 -48.3 107.8 6.9 6.1 34 35 A F H X5S+ 0 0 75 -4,-1.9 4,-1.9 -5,-0.5 -1,-0.2 0.918 119.0 41.8 -62.0 -44.5 107.9 9.3 3.2 35 36 A D H X< + 0 0 59 -4,-2.3 3,-0.6 -5,-0.2 -3,-0.2 0.891 39.6 160.0 37.7 57.6 111.2 4.0 -4.0 42 43 A P T 3 + 0 0 17 0, 0.0 -1,-0.1 0, 0.0 12,-0.1 0.825 65.8 59.4 -76.5 -33.2 110.2 0.3 -3.8 43 44 A W T 3 S- 0 0 29 -6,-0.2 6,-0.8 11,-0.1 5,-0.1 0.438 106.8-127.9 -75.9 2.4 106.4 0.9 -4.0 44 45 A F X> - 0 0 60 -3,-0.6 3,-1.5 1,-0.2 4,-1.1 0.933 30.4-172.2 50.1 51.4 107.2 2.6 -7.4 45 46 A P T 34 + 0 0 18 0, 0.0 -1,-0.2 0, 0.0 -38,-0.1 0.579 69.9 85.7 -51.1 -7.2 105.2 5.7 -6.3 46 47 A Q T 34 S+ 0 0 162 1,-0.2 -2,-0.1 -5,-0.1 -42,-0.1 0.962 102.9 23.1 -62.2 -52.8 105.7 6.7 -9.9 47 48 A E T <4 S- 0 0 62 -3,-1.5 -1,-0.2 54,-0.1 -3,-0.1 0.597 112.2-119.8 -88.3 -12.9 102.6 4.9 -11.2 48 49 A G < + 0 0 19 -4,-1.1 2,-0.3 1,-0.2 -4,-0.1 0.995 59.5 144.1 71.7 69.1 101.1 5.0 -7.7 49 50 A T - 0 0 22 -6,-0.8 2,-0.4 -5,-0.3 -1,-0.2 -0.927 48.0-114.6-136.4 161.3 100.7 1.3 -7.0 50 51 A I - 0 0 20 -2,-0.3 2,-0.5 35,-0.0 -7,-0.0 -0.793 22.7-163.6 -99.9 139.7 100.9 -1.1 -4.0 51 52 A D + 0 0 30 -2,-0.4 4,-0.3 1,-0.1 34,-0.0 -0.978 14.4 175.9-125.4 120.8 103.5 -3.8 -3.8 52 53 A I S > S+ 0 0 43 -2,-0.5 4,-1.1 2,-0.1 -1,-0.1 0.882 84.3 42.7 -88.0 -44.7 103.2 -6.6 -1.3 53 54 A K H >> S+ 0 0 149 2,-0.2 4,-1.3 1,-0.2 3,-0.6 0.952 117.2 45.2 -66.9 -51.4 106.3 -8.7 -2.3 54 55 A R H 3> S+ 0 0 91 1,-0.2 4,-2.3 2,-0.2 5,-0.3 0.845 105.1 64.9 -62.1 -32.5 108.6 -5.7 -2.6 55 56 A W H 3> S+ 0 0 53 -4,-0.3 4,-2.7 1,-0.2 -1,-0.2 0.894 100.1 51.0 -57.6 -39.7 107.2 -4.3 0.6 56 57 A R H < S+ 0 0 75 -4,-2.1 3,-1.4 1,-0.2 -2,-0.2 0.891 104.4 52.0 -73.4 -42.1 116.4 -2.9 13.5 67 68 A N H >< S+ 0 0 77 -4,-2.7 3,-3.7 1,-0.3 -2,-0.2 0.862 90.3 76.4 -63.4 -37.1 116.8 -6.3 15.2 68 69 A T T 3< S+ 0 0 90 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.703 90.0 61.1 -48.4 -17.1 120.5 -5.8 15.6 69 70 A F T < S- 0 0 123 -3,-1.4 -1,-0.3 -4,-0.1 -2,-0.2 0.199 109.4-127.2 -95.6 15.5 119.5 -3.5 18.4 70 71 A G < - 0 0 57 -3,-3.7 2,-0.4 1,-0.2 -3,-0.1 0.894 36.6-167.0 38.0 59.2 117.8 -6.4 20.3 71 72 A P - 0 0 14 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.639 20.9-175.5 -80.6 125.4 114.5 -4.5 20.5 72 73 A E S S+ 0 0 178 -2,-0.4 -2,-0.1 1,-0.1 0, 0.0 0.848 83.4 54.2 -85.7 -39.2 111.9 -5.9 22.9 73 74 A K S S+ 0 0 139 2,-0.0 3,-0.2 3,-0.0 -1,-0.1 0.889 76.4 175.6 -62.6 -41.3 109.2 -3.4 22.1 74 75 A V - 0 0 52 1,-0.1 2,-0.0 -8,-0.1 -7,-0.0 0.842 40.3-112.2 31.8 93.0 109.3 -4.2 18.4 75 76 A P > - 0 0 69 0, 0.0 3,-0.6 0, 0.0 -1,-0.1 -0.301 26.0-163.4 -55.6 125.6 106.4 -2.0 17.1 76 77 A V T >> S+ 0 0 94 1,-0.2 3,-3.0 -3,-0.2 4,-1.1 0.668 71.6 96.0 -82.8 -19.6 103.7 -4.3 15.8 77 78 A T H 3> S+ 0 0 69 1,-0.3 4,-1.8 2,-0.2 -1,-0.2 0.779 74.9 68.5 -41.6 -28.3 102.1 -1.4 13.9 78 79 A A H <> S+ 0 0 40 -3,-0.6 4,-1.8 1,-0.2 -1,-0.3 0.901 96.1 51.2 -59.8 -41.5 104.1 -2.8 11.0 79 80 A F H <> S+ 0 0 140 -3,-3.0 4,-2.3 1,-0.2 -1,-0.2 0.886 105.0 56.7 -63.2 -40.3 101.8 -5.9 11.0 80 81 A S H X S+ 0 0 33 -4,-1.1 4,-2.2 2,-0.2 -1,-0.2 0.898 105.0 52.0 -59.1 -42.1 98.7 -3.7 10.9 81 82 A Y H X S+ 0 0 27 -4,-1.8 4,-3.3 1,-0.2 5,-0.4 0.955 110.4 46.7 -60.0 -51.2 99.9 -2.0 7.8 82 83 A W H X S+ 0 0 72 -4,-1.8 4,-1.8 1,-0.2 -1,-0.2 0.868 109.3 56.4 -58.5 -38.5 100.5 -5.2 5.9 83 84 A N H X S+ 0 0 81 -4,-2.3 4,-1.5 2,-0.2 -1,-0.2 0.924 115.5 36.0 -61.5 -44.2 97.1 -6.4 7.1 84 85 A L H X S+ 0 0 13 -4,-2.2 4,-2.8 2,-0.2 3,-0.4 0.975 118.4 48.0 -73.0 -56.1 95.4 -3.5 5.5 85 86 A I H X S+ 0 0 10 -4,-3.3 4,-1.4 1,-0.2 -2,-0.2 0.789 108.8 60.4 -54.9 -25.6 97.6 -3.1 2.5 86 87 A K H X S+ 0 0 102 -4,-1.8 4,-0.9 -5,-0.4 -1,-0.2 0.951 113.9 31.3 -67.2 -50.6 97.0 -6.9 2.1 87 88 A E H X S+ 0 0 70 -4,-1.5 4,-1.4 -3,-0.4 -2,-0.2 0.690 109.5 71.7 -80.4 -19.9 93.3 -6.6 1.8 88 89 A L H < S+ 0 0 31 -4,-2.8 6,-0.3 1,-0.2 3,-0.3 0.925 99.3 45.7 -62.3 -44.8 93.6 -3.2 0.1 89 90 A I H < S+ 0 0 58 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.918 103.4 63.9 -64.3 -43.3 95.0 -4.8 -3.1 90 91 A D H < S+ 0 0 115 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.872 85.7 91.6 -47.9 -40.2 92.3 -7.5 -3.1 91 92 A K < - 0 0 111 -4,-1.4 3,-0.3 -3,-0.3 -3,-0.0 -0.317 66.1-156.4 -60.0 136.3 89.7 -4.8 -3.5 92 93 A K S S+ 0 0 201 1,-0.2 -1,-0.2 6,-0.0 6,-0.1 0.539 83.8 79.9 -90.3 -9.0 88.9 -4.1 -7.2 93 94 A E + 0 0 165 3,-0.0 -1,-0.2 2,-0.0 -4,-0.1 0.823 64.4 114.7 -66.5 -31.6 87.8 -0.6 -6.3 94 95 A V S S- 0 0 29 -6,-0.3 4,-0.3 -3,-0.3 -5,-0.0 -0.067 86.5 -84.9 -41.7 135.5 91.4 0.6 -6.2 95 96 A N > - 0 0 57 1,-0.2 3,-2.0 2,-0.1 4,-0.1 0.080 52.3 -87.7 -40.5 157.2 92.0 3.1 -9.0 96 97 A P T >> S+ 0 0 95 0, 0.0 4,-2.8 0, 0.0 3,-1.3 0.643 110.1 101.7 -45.6 -13.0 92.9 1.6 -12.4 97 98 A Q H 3> + 0 0 35 1,-0.3 4,-2.2 2,-0.2 -2,-0.1 0.747 69.3 67.8 -46.7 -23.7 96.4 1.7 -11.1 98 99 A V H <4 S+ 0 0 67 -3,-2.0 -1,-0.3 -4,-0.3 4,-0.1 0.953 111.5 27.6 -63.6 -50.3 95.9 -2.0 -10.5 99 100 A M H X4 S+ 0 0 154 -3,-1.3 3,-1.4 1,-0.2 -2,-0.2 0.868 122.5 52.9 -78.8 -39.0 95.8 -2.9 -14.2 100 101 A A H >< S+ 0 0 46 -4,-2.8 3,-2.6 1,-0.3 4,-0.3 0.840 95.4 69.0 -65.2 -33.5 98.0 0.0 -15.3 101 102 A A T >X S+ 0 0 13 -4,-2.2 3,-1.3 -5,-0.4 4,-0.7 0.688 80.3 80.0 -59.4 -15.7 100.6 -1.0 -12.7 102 103 A V H <> S+ 0 0 68 -3,-1.4 4,-2.2 1,-0.3 -1,-0.3 0.719 73.5 77.5 -63.8 -19.9 101.1 -4.0 -15.1 103 104 A A H <4 S+ 0 0 58 -3,-2.6 -1,-0.3 1,-0.2 -2,-0.2 0.872 89.9 53.9 -57.7 -37.7 103.2 -1.6 -17.2 104 105 A Q H <4 S+ 0 0 73 -3,-1.3 -1,-0.2 -4,-0.3 -2,-0.2 0.895 106.7 51.3 -64.4 -40.3 106.0 -2.1 -14.7 105 106 A T H < S+ 0 0 117 -4,-0.7 -2,-0.2 -3,-0.1 -1,-0.2 0.924 108.3 59.7 -62.8 -45.4 105.8 -5.9 -15.1 106 107 A E S < S- 0 0 108 -4,-2.2 2,-0.5 1,-0.1 -3,-0.0 0.210 106.5 -77.2 -66.3-163.4 106.0 -5.7 -18.9 107 108 A E > - 0 0 132 1,-0.1 3,-2.6 3,-0.1 -1,-0.1 -0.894 25.3-132.3-106.7 129.1 108.9 -4.1 -20.8 108 109 A I T 3 S+ 0 0 162 -2,-0.5 3,-0.2 1,-0.3 -1,-0.1 0.664 103.5 79.2 -50.4 -11.8 109.2 -0.3 -21.0 109 110 A L T 3 S+ 0 0 99 1,-0.2 2,-1.2 2,-0.1 -1,-0.3 0.896 85.5 58.5 -64.4 -40.6 109.7 -1.2 -24.7 110 111 A K < + 0 0 113 -3,-2.6 -1,-0.2 1,-0.2 6,-0.1 -0.703 60.9 168.3 -94.6 87.2 105.9 -1.7 -25.2 111 112 A S S S- 0 0 66 -2,-1.2 2,-0.2 4,-0.3 -1,-0.2 0.896 70.7 -5.8 -63.2 -41.6 104.5 1.7 -24.2 112 113 A N S S- 0 0 107 3,-0.4 0, 0.0 -3,-0.2 0, 0.0 -0.649 97.8 -67.9-137.2-166.3 101.1 0.7 -25.7 113 114 A S S S+ 0 0 112 -2,-0.2 3,-0.1 -3,-0.0 -2,-0.0 0.699 105.4 96.3 -64.0 -17.3 99.4 -2.1 -27.6 114 115 A Q S S- 0 0 94 1,-0.1 4,-0.1 2,-0.1 2,-0.0 0.284 89.4 -73.3 -56.1-166.0 101.5 -0.9 -30.5 115 116 A T - 0 0 85 2,-0.5 -3,-0.4 1,-0.1 -4,-0.3 -0.076 56.5 -82.0 -83.3-171.7 104.8 -2.7 -31.4 116 117 A D S S+ 0 0 97 -6,-0.1 2,-0.5 -5,-0.1 -5,-0.2 0.797 117.8 64.9 -63.3 -28.3 108.1 -2.5 -29.5 117 118 A L S S- 0 0 109 -7,-0.1 -2,-0.5 -6,-0.0 2,-0.3 -0.851 82.0-139.1-101.5 129.8 108.8 0.8 -31.3 118 119 A E - 0 0 112 -2,-0.5 2,-0.4 -4,-0.1 -2,-0.1 -0.676 14.8-152.2 -88.3 139.3 106.6 3.8 -30.7 119 120 A H - 0 0 132 -2,-0.3 2,-0.3 -4,-0.1 3,-0.1 -0.879 10.7-171.8-113.2 143.7 105.5 6.0 -33.6 120 121 A H > - 0 0 77 -2,-0.4 4,-2.5 1,-0.1 -2,-0.0 -0.984 30.5-133.1-135.0 145.6 104.7 9.7 -33.5 121 122 A H T 4 S+ 0 0 173 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.867 110.1 54.0 -62.2 -36.8 103.2 12.1 -36.1 122 123 A H T 4 S+ 0 0 189 1,-0.2 -1,-0.2 -3,-0.1 -3,-0.0 0.917 110.6 45.0 -64.4 -43.9 105.9 14.6 -35.1 123 124 A H T 4 0 0 157 0, 0.0 -2,-0.2 0, 0.0 -1,-0.2 0.898 360.0 360.0 -66.9 -40.7 108.7 12.1 -35.7 124 125 A H < 0 0 208 -4,-2.5 -3,-0.2 0, 0.0 -5,-0.0 0.287 360.0 360.0-153.0 360.0 107.2 10.9 -39.0