==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 19-MAR-12 2LQY . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN H; . SOURCE 2 SYNTHETIC: YES; . AUTHOR C.ISERNIA,S.GALDIERO,L.RUSSO,A.FALANGA,M.CANTISANI,M.VITIELL . 20 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2418.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 35.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A H 0 0 237 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -64.7 -6.6 -13.5 -5.0 2 2 A G >> + 0 0 35 0, 0.0 3,-1.9 0, 0.0 4,-1.6 -0.542 360.0 29.7-179.7 -88.2 -3.0 -12.6 -4.2 3 3 A L H 3> S+ 0 0 133 1,-0.3 4,-1.6 2,-0.3 5,-0.2 0.810 111.8 66.0 -63.2 -37.0 -1.5 -9.4 -5.8 4 4 A A H 34 S+ 0 0 68 1,-0.3 -1,-0.3 2,-0.2 0, 0.0 0.778 113.4 34.9 -55.9 -24.8 -5.0 -7.7 -5.9 5 5 A S H X> S+ 0 0 68 -3,-1.9 3,-2.2 2,-0.1 4,-0.7 0.661 102.0 74.1-103.5 -24.9 -4.7 -7.8 -2.1 6 6 A T H 3X S+ 0 0 89 -4,-1.6 4,-1.5 1,-0.3 3,-0.4 0.838 98.4 51.5 -56.3 -27.7 -0.9 -7.2 -2.0 7 7 A L H 3< S+ 0 0 107 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.1 0.392 101.3 62.4 -91.2 8.0 -1.9 -3.6 -2.9 8 8 A T H <4 S+ 0 0 98 -3,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.536 111.9 34.9-106.1 -12.0 -4.4 -3.6 0.0 9 9 A R H >< S+ 0 0 189 -4,-0.7 3,-2.3 -3,-0.4 4,-0.5 0.821 117.7 46.5-107.4 -54.5 -1.6 -4.0 2.6 10 10 A W G >X S+ 0 0 148 -4,-1.5 3,-1.6 1,-0.3 4,-1.3 0.873 105.8 65.2 -56.4 -29.6 1.4 -2.1 1.2 11 11 A A G 34 S+ 0 0 61 1,-0.3 -1,-0.3 -5,-0.2 -2,-0.1 0.491 98.5 54.0 -72.0 -0.2 -1.2 0.7 0.6 12 12 A H G <4 S+ 0 0 129 -3,-2.3 -1,-0.3 2,-0.1 -2,-0.2 0.521 109.2 48.7-105.3 -9.9 -1.5 0.9 4.4 13 13 A Y T X> S+ 0 0 160 -3,-1.6 3,-1.8 -4,-0.5 4,-0.7 0.931 114.8 36.4 -95.5 -68.7 2.2 1.4 4.9 14 14 A N H 3X S+ 0 0 48 -4,-1.3 4,-1.1 1,-0.3 -3,-0.1 0.650 93.1 95.2 -62.3 -9.8 3.3 4.1 2.5 15 15 A A H 34 S+ 0 0 63 -5,-0.4 -1,-0.3 1,-0.2 -2,-0.1 0.819 100.6 28.1 -50.6 -27.0 -0.1 5.7 3.3 16 16 A L H <4 S+ 0 0 156 -3,-1.8 -1,-0.2 -4,-0.1 -2,-0.2 0.703 117.9 57.4-104.1 -30.0 1.9 7.7 5.9 17 17 A I H < S+ 0 0 120 -4,-0.7 2,-0.3 2,-0.0 -2,-0.2 0.311 90.1 105.8 -83.3 9.6 5.3 7.6 4.0 18 18 A R < + 0 0 172 -4,-1.1 -3,-0.0 -5,-0.2 0, 0.0 -0.634 35.1 163.8 -93.9 145.0 3.4 9.3 1.1 19 19 A A 0 0 109 1,-0.5 -1,-0.1 -2,-0.3 -2,-0.0 0.601 360.0 360.0-120.6 -56.5 3.8 13.0 0.2 20 20 A F 0 0 228 0, 0.0 -1,-0.5 0, 0.0 0, 0.0 -0.813 360.0 360.0-112.4 360.0 2.4 13.5 -3.4