==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 01-OCT-93 1LRA . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.PLETINCKX,J.STEYAERT,H.-W.CHOE,U.HEINEMANN,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5660.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 55.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 110 0, 0.0 2,-1.0 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 152.3 7.6 13.8 -4.7 2 2 A a + 0 0 61 1,-0.2 10,-0.2 10,-0.1 3,-0.1 -0.839 360.0 158.8 -97.0 94.9 5.2 13.3 -1.9 3 3 A D S S+ 0 0 86 8,-1.8 2,-0.3 -2,-1.0 9,-0.2 0.649 71.0 16.9 -94.6 -19.6 3.8 9.8 -2.6 4 4 A Y E -A 11 0A 55 7,-1.7 7,-2.9 -3,-0.2 2,-0.5 -0.958 67.8-152.1-147.0 148.2 2.6 9.2 0.9 5 5 A T E -A 10 0A 51 -2,-0.3 99,-1.8 5,-0.2 2,-0.5 -0.992 10.5-179.0-123.2 127.9 2.0 11.6 3.8 6 6 A b E > S-A 9 0A 1 3,-2.3 3,-2.4 -2,-0.5 2,-0.2 -0.975 74.8 -43.7-120.6 105.6 2.3 10.4 7.4 7 7 A G T 3 S- 0 0 41 -2,-0.5 84,-0.0 86,-0.3 0, 0.0 -0.605 123.4 -30.2 69.2-132.1 1.5 13.4 9.6 8 8 A S T 3 S+ 0 0 120 -2,-0.2 2,-0.4 -3,-0.1 -1,-0.3 0.134 117.2 106.7 -99.7 15.9 3.4 16.3 7.9 9 9 A N E < -A 6 0A 44 -3,-2.4 -3,-2.3 2,-0.0 2,-0.4 -0.813 54.8-157.8 -97.6 142.1 6.2 14.0 6.6 10 10 A a E -A 5 0A 68 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.931 8.9-172.4-115.1 140.2 6.2 13.2 2.9 11 11 A Y E -A 4 0A 5 -7,-2.9 -8,-1.8 -2,-0.4 -7,-1.7 -0.996 12.8-139.1-135.0 148.8 7.9 10.3 1.4 12 12 A S > - 0 0 14 -2,-0.4 4,-2.5 -10,-0.2 5,-0.2 -0.424 32.2-106.1 -94.9 164.0 8.5 9.2 -2.1 13 13 A S H > S+ 0 0 71 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.898 124.3 50.5 -55.3 -36.0 8.3 5.7 -3.7 14 14 A S H > S+ 0 0 75 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.911 105.8 53.5 -70.1 -39.2 12.1 5.6 -3.7 15 15 A D H > S+ 0 0 64 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.906 112.5 46.9 -58.4 -43.2 12.3 6.6 -0.0 16 16 A V H X S+ 0 0 1 -4,-2.5 4,-2.7 1,-0.2 -2,-0.2 0.928 111.2 49.1 -69.8 -43.2 9.9 3.6 0.7 17 17 A S H X S+ 0 0 65 -4,-2.7 4,-1.9 1,-0.2 -2,-0.2 0.841 112.8 49.4 -64.7 -39.8 11.8 1.1 -1.5 18 18 A T H X S+ 0 0 82 -4,-2.5 4,-1.6 -5,-0.2 -1,-0.2 0.950 112.3 45.6 -63.4 -50.8 15.1 2.1 0.2 19 19 A A H X S+ 0 0 6 -4,-2.1 4,-2.1 -5,-0.2 3,-0.3 0.952 113.9 49.7 -59.8 -54.1 13.7 1.8 3.8 20 20 A Q H X S+ 0 0 17 -4,-2.7 4,-3.0 1,-0.2 -1,-0.2 0.889 106.6 55.1 -52.5 -46.0 12.0 -1.6 3.0 21 21 A A H X S+ 0 0 50 -4,-1.9 4,-2.1 2,-0.2 -1,-0.2 0.882 110.5 46.1 -57.9 -42.2 15.2 -3.1 1.5 22 22 A A H X S+ 0 0 21 -4,-1.6 4,-2.0 -3,-0.3 -2,-0.2 0.947 114.4 47.9 -64.4 -50.5 17.2 -2.3 4.7 23 23 A G H X S+ 0 0 0 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.893 112.4 48.3 -60.2 -43.8 14.4 -3.7 6.9 24 24 A Y H X S+ 0 0 41 -4,-3.0 4,-2.5 1,-0.2 -1,-0.2 0.906 107.7 53.8 -70.0 -42.5 14.1 -6.9 4.8 25 25 A K H X S+ 0 0 154 -4,-2.1 4,-2.3 1,-0.2 -1,-0.2 0.852 111.4 46.2 -61.1 -38.5 17.8 -7.6 4.8 26 26 A L H X>S+ 0 0 39 -4,-2.0 5,-1.5 2,-0.2 4,-1.1 0.918 110.6 54.2 -68.9 -39.9 18.0 -7.4 8.6 27 27 A H H ><5S+ 0 0 35 -4,-2.3 3,-0.8 1,-0.2 -2,-0.2 0.900 110.7 45.5 -54.9 -49.2 14.9 -9.6 8.8 28 28 A E H 3<5S+ 0 0 101 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.834 111.6 50.7 -61.7 -40.8 16.6 -12.2 6.7 29 29 A D H 3<5S- 0 0 126 -4,-2.3 -1,-0.3 -5,-0.2 -2,-0.2 0.616 107.5-130.4 -72.3 -14.2 19.8 -12.0 8.7 30 30 A G T <<5 + 0 0 65 -4,-1.1 2,-0.2 -3,-0.8 -3,-0.2 0.638 66.4 121.5 71.2 25.2 17.7 -12.4 11.9 31 31 A E < - 0 0 142 -5,-1.5 2,-0.3 2,-0.0 -1,-0.3 -0.648 45.3-154.4-112.8 163.1 19.3 -9.4 13.6 32 32 A T - 0 0 72 -2,-0.2 2,-0.3 -3,-0.1 8,-0.1 -0.905 2.2-147.1-137.2 166.6 17.7 -6.2 14.9 33 33 A V B > +B 38 0B 46 5,-2.1 5,-2.7 -2,-0.3 37,-0.2 -0.964 55.6 21.0-138.4 149.5 18.7 -2.6 15.6 34 34 A G T > 5S- 0 0 30 -2,-0.3 3,-2.2 35,-0.2 38,-0.1 0.237 91.1 -74.3 75.6 162.7 17.6 -0.1 18.2 35 35 A S T 3 5S+ 0 0 126 1,-0.3 -1,-0.2 36,-0.2 -3,-0.0 0.799 130.5 52.5 -64.2 -27.1 16.0 -0.6 21.6 36 36 A N T 3 5S- 0 0 99 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.274 112.4-123.7 -92.0 8.0 12.6 -1.5 20.3 37 37 A S T < 5 - 0 0 48 -3,-2.2 -3,-0.2 1,-0.1 -2,-0.1 0.934 34.7-130.8 49.1 82.5 14.3 -4.1 18.1 38 38 A Y B + 0 0 32 1,-0.1 3,-1.2 2,-0.1 -1,-0.0 0.865 44.3 157.5 65.2 40.3 -2.3 -5.7 12.2 45 45 A Y T 3 S+ 0 0 146 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.864 72.3 60.1 -62.1 -33.1 -4.4 -5.3 15.3 46 46 A E T 3 S- 0 0 62 1,-0.0 -1,-0.3 55,-0.0 -2,-0.1 0.669 106.4-132.0 -67.3 -24.6 -5.8 -2.3 13.4 47 47 A G < - 0 0 55 -3,-1.2 -2,-0.1 1,-0.2 2,-0.1 0.804 31.4-175.7 72.4 41.5 -7.0 -4.5 10.6 48 48 A F - 0 0 34 1,-0.1 2,-1.7 53,-0.0 -1,-0.2 -0.389 33.4-117.2 -66.9 146.1 -5.7 -2.6 7.6 49 49 A D + 0 0 158 -2,-0.1 -1,-0.1 2,-0.1 2,-0.1 -0.623 44.0 177.2 -87.9 76.3 -6.8 -4.1 4.3 50 50 A F - 0 0 17 -2,-1.7 37,-0.1 1,-0.1 38,-0.1 -0.570 27.1-146.3 -76.5 154.4 -3.4 -4.9 3.0 51 51 A S S S+ 0 0 119 36,-0.3 2,-0.3 -2,-0.1 -1,-0.1 -0.271 75.5 76.5-114.9 39.8 -3.3 -6.7 -0.4 52 52 A V S S- 0 0 24 35,-0.1 -2,-0.1 33,-0.1 35,-0.0 -0.978 90.7 -95.7-139.0 145.5 -0.2 -8.8 0.4 53 53 A S - 0 0 65 -2,-0.3 30,-0.2 1,-0.1 29,-0.2 -0.387 50.8 -92.5 -71.6 156.7 -0.1 -12.0 2.6 54 54 A S S S+ 0 0 81 27,-0.1 2,-0.1 -4,-0.1 27,-0.1 -0.223 81.7 88.4 -78.3 171.1 0.8 -11.9 6.3 55 55 A P - 0 0 53 0, 0.0 27,-1.0 0, 0.0 2,-0.3 0.548 64.2-167.9 -76.5 160.3 2.9 -12.2 8.4 56 56 A Y E -CD 42 81C 27 -14,-0.7 -14,-2.6 25,-0.2 2,-0.3 -0.764 12.2-160.7-114.0 154.7 4.0 -8.6 8.4 57 57 A Y E -CD 41 80C 32 23,-2.1 23,-2.0 -16,-0.3 2,-0.3 -0.932 12.6-139.8-131.1 150.0 7.1 -6.8 9.9 58 58 A A E -CD 40 79C 2 -18,-2.4 -18,-1.2 -2,-0.3 21,-0.2 -0.884 17.4-179.6-114.2 140.0 7.5 -3.0 10.6 59 59 A W E - D 0 78C 2 19,-2.0 19,-3.0 -2,-0.3 2,-0.1 -0.963 34.1-106.1-140.4 136.7 10.7 -1.0 10.0 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.369 26.3-161.9 -65.6 143.2 11.1 2.7 10.7 61 61 A I B -G 67 0D 7 15,-1.7 15,-0.4 12,-0.3 2,-0.4 -0.991 15.7-147.2-123.7 135.3 11.1 5.1 7.8 62 62 A L > - 0 0 35 4,-0.6 3,-2.3 -2,-0.4 12,-0.1 -0.917 18.6-141.7-115.4 138.5 12.6 8.5 8.6 63 63 A S T 3 S+ 0 0 80 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.635 99.3 69.5 -64.2 -19.1 11.8 12.0 7.4 64 64 A S T 3 S- 0 0 80 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.579 109.7-120.3 -74.6 -10.4 15.4 13.0 7.4 65 65 A G S < S+ 0 0 53 -3,-2.3 -2,-0.1 1,-0.3 2,-0.1 0.307 72.5 126.3 90.4 -6.8 16.0 10.5 4.5 66 66 A D - 0 0 114 1,-0.0 -4,-0.6 -5,-0.0 2,-0.4 -0.480 67.1-111.7 -80.5 161.0 18.5 8.4 6.5 67 67 A V B -G 61 0D 64 -6,-0.1 -6,-0.1 -3,-0.1 -48,-0.0 -0.860 45.2 -96.1 -90.5 135.5 18.0 4.7 6.8 68 68 A Y + 0 0 10 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.126 48.9 167.7 -45.1 129.7 17.2 3.7 10.4 69 69 A S - 0 0 99 1,-0.9 -35,-0.2 3,-0.1 2,-0.1 -0.002 64.1 -69.7-135.7 28.9 20.4 2.6 12.3 70 70 A G S S+ 0 0 22 -37,-0.2 -1,-0.9 1,-0.1 2,-0.3 -0.278 97.0 86.4 101.6 169.6 19.1 2.6 15.9 71 71 A G S S- 0 0 59 -2,-0.1 -36,-0.2 -3,-0.1 -1,-0.1 -0.687 92.5 -2.5 101.3-165.4 18.3 5.8 17.7 72 72 A S - 0 0 101 -2,-0.3 -3,-0.1 1,-0.1 -2,-0.1 -0.518 55.2-165.6 -65.0 118.4 14.9 7.5 17.5 73 73 A P - 0 0 31 0, 0.0 3,-0.4 0, 0.0 -12,-0.3 0.549 22.5-151.3 -87.5 -9.0 12.5 5.7 15.2 74 74 A G - 0 0 49 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.202 40.7 -67.4 73.1-167.4 9.9 8.5 14.9 75 75 A A S S+ 0 0 24 -69,-0.1 17,-2.5 -14,-0.1 2,-0.3 0.547 101.0 92.4-101.7 -6.7 6.3 7.5 14.3 76 76 A D E - E 0 91C 3 -15,-0.4 -15,-1.7 -3,-0.4 2,-0.3 -0.745 46.0-178.6-102.1 147.6 6.5 6.1 10.8 77 77 A R E -DE 60 90C 12 13,-3.6 13,-3.0 -2,-0.3 2,-0.4 -0.989 24.5-142.1-143.2 148.9 6.9 2.6 9.4 78 78 A V E -DE 59 89C 0 -19,-3.0 -19,-2.0 -2,-0.3 2,-0.4 -0.802 27.6-152.4 -98.9 142.7 7.2 0.7 6.2 79 79 A V E +DE 58 88C 0 9,-2.5 8,-3.3 -2,-0.4 9,-1.3 -0.984 22.5 163.0-118.7 136.2 5.4 -2.6 6.5 80 80 A F E -DE 57 86C 0 -23,-2.0 -23,-2.1 -2,-0.4 2,-0.2 -0.860 25.7-125.4-143.1 168.9 6.5 -5.7 4.3 81 81 A N E > -D 56 0C 2 4,-1.6 3,-2.3 -2,-0.3 -25,-0.2 -0.584 39.4 -87.2-110.2-174.0 6.0 -9.4 4.4 82 82 A E T 3 S+ 0 0 72 -27,-1.0 -26,-0.1 1,-0.3 -28,-0.1 0.781 127.3 55.4 -59.2 -27.3 8.2 -12.5 4.4 83 83 A N T 3 S- 0 0 105 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.422 116.8-112.7 -89.1 3.2 8.2 -12.4 0.6 84 84 A N < + 0 0 63 -3,-2.3 2,-0.5 1,-0.3 -2,-0.1 0.872 68.5 144.7 67.0 39.1 9.6 -8.7 0.5 85 85 A Q - 0 0 80 -32,-0.1 -4,-1.6 -4,-0.0 2,-0.3 -0.878 54.6-117.0-101.6 140.2 6.3 -7.4 -0.9 86 86 A L E -E 80 0C 60 -2,-0.5 -6,-0.3 -6,-0.2 3,-0.1 -0.530 29.5-177.1 -74.7 135.9 5.4 -3.9 0.4 87 87 A A E - 0 0 17 -8,-3.3 -36,-0.3 1,-0.4 2,-0.3 0.819 54.5 -61.0-101.6 -33.7 2.2 -3.9 2.4 88 88 A G E -E 79 0C 9 -9,-1.3 -9,-2.5 -38,-0.1 2,-0.4 -0.952 41.6-100.4 169.3 178.1 1.8 -0.2 3.3 89 89 A V E -E 78 0C 2 14,-0.3 14,-2.3 -2,-0.3 2,-0.3 -0.992 45.1-178.4-127.8 128.6 3.4 2.8 5.1 90 90 A I E -EF 77 102C 0 -13,-3.0 -13,-3.6 -2,-0.4 2,-0.3 -0.870 8.9-163.1-128.8 167.3 1.8 3.5 8.5 91 91 A T E -EF 76 101C 2 10,-2.6 10,-2.3 -2,-0.3 -15,-0.2 -0.994 30.5-141.4-158.1 153.7 2.3 6.0 11.3 92 92 A H S > S+ 0 0 47 -17,-2.5 3,-1.7 -2,-0.3 2,-0.2 0.820 75.4 106.3 -83.6 -25.5 1.5 6.6 14.9 93 93 A T T 3 S+ 0 0 68 1,-0.2 -86,-0.3 -18,-0.2 8,-0.1 -0.450 85.7 19.4 -65.6 129.5 0.9 10.4 14.1 94 94 A G T 3 S+ 0 0 76 1,-0.3 2,-0.3 -2,-0.2 -1,-0.2 0.399 108.1 93.7 91.5 2.5 -2.9 11.1 14.2 95 95 A A S < S- 0 0 30 -3,-1.7 -1,-0.3 4,-0.2 2,-0.1 -0.891 73.6-118.0-119.2 154.9 -3.8 8.0 16.3 96 96 A S S > S- 0 0 87 -2,-0.3 3,-2.4 4,-0.1 -3,-0.0 -0.431 73.4 -10.0 -86.7 161.2 -4.1 7.8 20.1 97 97 A G T 3 S- 0 0 70 1,-0.3 -2,-0.1 -2,-0.1 0, 0.0 -0.152 128.5 -30.1 50.7-130.0 -2.0 5.6 22.4 98 98 A N T 3 S+ 0 0 142 2,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.226 105.4 127.5-101.9 17.2 0.2 3.1 20.5 99 99 A N < - 0 0 85 -3,-2.4 2,-0.3 -7,-0.1 -4,-0.2 -0.181 48.3-137.1 -71.5 166.7 -2.4 2.9 17.7 100 100 A F - 0 0 29 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.867 12.5-166.1-123.9 158.4 -1.6 3.4 14.0 101 101 A V E -F 91 0C 55 -10,-2.3 -10,-2.6 -2,-0.3 2,-0.3 -0.893 34.3-106.7-132.4 155.8 -3.3 5.1 11.1 102 102 A E E -F 90 0C 89 -2,-0.3 -12,-0.2 -12,-0.2 2,-0.2 -0.661 29.6-117.2 -88.4 149.1 -2.3 4.5 7.5 103 103 A b 0 0 13 -14,-2.3 -14,-0.3 -2,-0.3 -97,-0.2 -0.569 360.0 360.0 -72.4 141.8 -0.3 7.2 5.6 104 104 A T 0 0 139 -99,-1.8 -98,-0.1 -2,-0.2 -1,-0.1 0.631 360.0 360.0-119.0 360.0 -2.3 8.5 2.6