==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 17-MAY-02 1LS9 . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: CLADOPHORA GLOMERATA; . AUTHOR W.CARPENTIER . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5424.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 67.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 133 0, 0.0 2,-0.1 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 133.6 3.3 1.9 9.1 2 2 A D > - 0 0 75 1,-0.2 4,-2.1 2,-0.1 5,-0.2 -0.295 360.0-149.3 -53.4 120.2 -0.5 1.1 9.6 3 3 A A H > S+ 0 0 80 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.891 97.0 51.5 -62.3 -37.8 -2.3 2.6 6.6 4 4 A E H > S+ 0 0 59 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.910 106.8 54.4 -70.1 -35.5 -5.5 3.3 8.7 5 5 A L H > S+ 0 0 47 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.928 112.1 44.4 -60.0 -48.1 -3.4 5.1 11.3 6 6 A L H X S+ 0 0 32 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.905 113.0 50.4 -66.4 -40.5 -2.0 7.4 8.6 7 7 A A H X S+ 0 0 57 -4,-2.6 4,-1.8 2,-0.2 -1,-0.2 0.911 111.6 48.5 -61.7 -42.1 -5.4 7.9 7.0 8 8 A D H X S+ 0 0 93 -4,-2.6 4,-2.4 -5,-0.2 -2,-0.2 0.924 111.4 50.4 -61.0 -42.8 -6.8 8.8 10.4 9 9 A G H X S+ 0 0 0 -4,-2.4 4,-2.6 68,-0.3 -2,-0.2 0.891 106.3 54.5 -66.8 -36.1 -3.9 11.2 11.0 10 10 A K H X S+ 0 0 132 -4,-2.7 4,-2.6 2,-0.2 -1,-0.2 0.888 109.3 49.2 -60.1 -42.3 -4.4 12.9 7.6 11 11 A K H X S+ 0 0 85 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.934 110.8 48.2 -64.0 -44.9 -8.0 13.5 8.6 12 12 A V H X S+ 0 0 11 -4,-2.4 4,-1.7 1,-0.2 5,-0.4 0.906 112.0 51.8 -62.5 -38.3 -7.1 14.9 11.9 13 13 A F H X>S+ 0 0 12 -4,-2.6 4,-2.7 1,-0.2 5,-1.9 0.949 109.3 48.2 -64.4 -47.6 -4.5 17.1 10.2 14 14 A A H <5S+ 0 0 71 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.883 115.8 45.0 -57.1 -39.6 -7.0 18.4 7.7 15 15 A G H <5S+ 0 0 61 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.721 132.8 11.3 -76.7 -24.4 -9.5 19.2 10.4 16 16 A N H <5S+ 0 0 59 -4,-1.7 -3,-0.2 -3,-0.3 -2,-0.2 0.601 127.8 35.0-131.5 -21.2 -7.2 20.8 12.9 17 17 A C T >X5S+ 0 0 22 -4,-2.7 4,-2.0 -5,-0.4 3,-1.7 0.700 89.7 78.4-120.2 -25.0 -3.7 21.6 11.6 18 18 A A H 3>< S+ 0 0 22 -4,-2.0 3,-2.4 5,-0.2 4,-0.2 -0.089 70.5 164.6-125.6 35.0 0.5 24.1 8.5 22 22 A L G >< S+ 0 0 132 -4,-0.8 3,-1.7 1,-0.3 -3,-0.0 -0.233 77.9 6.5 -51.4 135.5 -0.9 24.0 4.9 23 23 A G G 3 S- 0 0 36 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.642 131.3 -68.7 68.6 11.0 1.4 22.0 2.7 24 24 A G G < S+ 0 0 0 -3,-2.4 10,-3.1 1,-0.2 11,-0.4 0.588 111.8 112.3 78.8 8.9 3.6 21.1 5.7 25 25 A N < - 0 0 72 -3,-1.7 2,-0.3 8,-0.2 -1,-0.2 0.103 69.6-113.7 -94.2-157.1 4.7 24.7 6.1 26 26 A N - 0 0 25 4,-0.2 -5,-0.2 7,-0.1 6,-0.1 -0.835 19.9-175.0-147.6 108.3 3.9 27.3 8.8 27 27 A S S S+ 0 0 89 -7,-2.4 3,-0.2 -2,-0.3 -6,-0.1 0.455 87.8 48.3 -81.5 -6.4 1.9 30.3 8.0 28 28 A V S S+ 0 0 89 -8,-0.5 2,-0.4 1,-0.3 -1,-0.2 0.801 130.4 12.0 -95.8 -46.3 2.4 31.8 11.4 29 29 A L S > S- 0 0 97 3,-0.1 3,-1.7 1,-0.1 -1,-0.3 -0.885 79.1-156.0-135.1 95.9 6.1 31.4 11.9 30 30 A A T 3 S+ 0 0 72 -2,-0.4 -4,-0.2 1,-0.3 3,-0.2 0.742 83.0 51.8 -59.2 -33.1 7.5 30.5 8.5 31 31 A D T 3 S+ 0 0 113 1,-0.2 2,-1.7 -6,-0.1 -1,-0.3 0.756 91.9 76.3 -72.5 -25.1 10.7 28.8 9.3 32 32 A K S < S+ 0 0 73 -3,-1.7 -1,-0.2 -6,-0.1 -3,-0.1 -0.436 70.6 155.0 -93.9 65.9 9.2 26.3 11.8 33 33 A T - 0 0 20 -2,-1.7 -8,-0.2 -3,-0.2 -7,-0.1 -0.114 58.2-110.2 -82.0-177.9 7.6 24.0 9.3 34 34 A L S S+ 0 0 22 -10,-3.1 -9,-0.2 -9,-0.1 2,-0.1 0.228 79.8 116.2 -98.2 12.7 6.7 20.3 9.4 35 35 A K S > S- 0 0 76 -11,-0.4 4,-2.7 1,-0.1 5,-0.3 -0.484 78.2-111.1 -81.9 155.3 9.5 19.4 6.9 36 36 A K H > S+ 0 0 33 50,-0.5 4,-2.6 1,-0.2 5,-0.2 0.880 113.8 48.3 -57.5 -47.0 12.3 17.2 8.1 37 37 A D H > S+ 0 0 116 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.922 113.5 47.5 -68.4 -33.4 15.1 19.7 8.1 38 38 A A H > S+ 0 0 13 2,-0.2 4,-2.9 1,-0.2 5,-0.5 0.913 112.5 49.0 -68.4 -45.4 13.0 22.3 10.0 39 39 A I H X S+ 0 0 8 -4,-2.7 4,-1.9 1,-0.2 7,-0.3 0.949 111.2 50.1 -59.8 -46.2 11.9 19.8 12.6 40 40 A E H < S+ 0 0 103 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.883 117.5 41.4 -57.8 -40.1 15.5 18.6 13.0 41 41 A K H < S+ 0 0 154 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.864 131.0 17.2 -77.2 -35.6 16.6 22.3 13.4 42 42 A Y H < S+ 0 0 80 -4,-2.9 2,-0.4 -5,-0.2 -3,-0.2 0.769 94.1 93.1-118.5 -24.7 13.9 23.7 15.6 43 43 A L S >< S- 0 0 25 -4,-1.9 3,-2.9 -5,-0.5 2,-0.2 -0.559 78.4-116.0 -82.7 131.4 11.8 21.0 17.4 44 44 A E T 3 S+ 0 0 156 -2,-0.4 11,-0.1 1,-0.3 -1,-0.1 -0.443 107.1 21.7 -62.2 123.7 12.9 20.1 20.9 45 45 A G T 3 S- 0 0 60 -2,-0.2 -1,-0.3 -5,-0.1 6,-0.2 0.267 109.5-124.9 97.9 -12.2 13.9 16.5 20.6 46 46 A G < - 0 0 16 -3,-2.9 2,-1.7 -7,-0.3 -6,-0.2 -0.230 65.8 -9.5 72.0-157.4 14.4 16.7 16.8 47 47 A L S S+ 0 0 31 4,-0.1 2,-0.3 -11,-0.1 -1,-0.1 -0.581 93.7 119.9 -85.8 82.3 12.7 14.4 14.3 48 48 A T > - 0 0 52 -2,-1.7 4,-2.2 1,-0.1 5,-0.2 -0.982 69.7-123.8-136.0 155.1 11.1 11.8 16.4 49 49 A L H > S+ 0 0 63 -2,-0.3 4,-3.0 1,-0.2 5,-0.2 0.904 114.9 54.2 -61.9 -42.5 7.5 10.7 16.9 50 50 A E H > S+ 0 0 161 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.895 109.2 47.5 -59.0 -43.2 8.0 11.4 20.7 51 51 A A H > S+ 0 0 6 2,-0.2 4,-1.9 -6,-0.2 -1,-0.2 0.898 114.0 46.2 -65.1 -43.2 9.1 14.9 20.0 52 52 A I H X S+ 0 0 9 -4,-2.2 4,-2.5 1,-0.2 -2,-0.2 0.951 114.2 47.4 -63.2 -53.1 6.3 15.6 17.6 53 53 A K H X S+ 0 0 49 -4,-3.0 4,-2.9 1,-0.2 -2,-0.2 0.870 108.4 56.4 -59.3 -39.4 3.7 14.1 19.9 54 54 A Y H X S+ 0 0 138 -4,-2.4 4,-2.8 -5,-0.2 5,-0.2 0.917 111.1 42.3 -60.2 -46.9 5.1 16.1 22.8 55 55 A Q H X S+ 0 0 48 -4,-1.9 4,-2.5 2,-0.2 -1,-0.2 0.876 113.0 52.3 -69.5 -37.4 4.6 19.4 21.0 56 56 A V H < S+ 0 0 19 -4,-2.5 10,-2.4 -5,-0.2 11,-0.2 0.951 116.7 41.8 -60.1 -45.1 1.2 18.5 19.6 57 57 A N H < S+ 0 0 45 -4,-2.9 10,-2.2 9,-0.2 11,-0.3 0.910 129.1 24.9 -64.8 -47.1 0.1 17.6 23.2 58 58 A N H < S- 0 0 88 -4,-2.8 7,-0.3 7,-0.2 -3,-0.2 0.550 94.7-141.7-109.2 -6.5 1.7 20.5 25.0 59 59 A G < - 0 0 18 -4,-2.5 2,-0.2 5,-0.4 6,-0.2 0.071 3.7-134.2 74.9 171.5 2.0 23.3 22.6 60 60 A K B > -A 63 0A 108 3,-2.4 3,-2.9 1,-0.2 -1,-0.1 -0.762 57.0 -44.7-165.7 120.6 4.8 25.9 22.1 61 61 A G T 3 S- 0 0 84 1,-0.3 -1,-0.2 -2,-0.2 0, 0.0 -0.295 131.3 -7.2 60.5-125.9 4.5 29.6 21.6 62 62 A A T 3 S+ 0 0 83 -3,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.443 113.8 101.6 -86.4 3.0 1.7 30.2 19.1 63 63 A M B < S-A 60 0A 39 -3,-2.9 -3,-2.4 1,-0.0 0, 0.0 -0.799 78.2-130.3 -81.4 117.0 1.4 26.4 18.4 64 64 A P - 0 0 52 0, 0.0 -5,-0.4 0, 0.0 2,-0.4 -0.158 11.6-115.9 -69.6 152.2 -1.6 25.5 20.5 65 65 A A - 0 0 44 -7,-0.3 -8,-0.2 -6,-0.2 -7,-0.2 -0.774 27.1-172.7 -81.9 139.8 -1.5 22.5 22.9 66 66 A W >> + 0 0 21 -10,-2.4 4,-2.1 -2,-0.4 3,-2.1 0.456 56.8 97.7-113.6 -5.6 -4.0 19.8 21.8 67 67 A A T 34 S+ 0 0 58 -10,-2.2 -1,-0.1 1,-0.3 -9,-0.1 0.792 93.1 41.6 -61.7 -21.9 -4.0 17.3 24.7 68 68 A D T 34 S+ 0 0 123 -11,-0.3 -1,-0.3 1,-0.1 -2,-0.1 0.371 120.4 45.0-103.1 7.3 -7.2 18.8 26.1 69 69 A R T <4 S+ 0 0 151 -3,-2.1 2,-0.4 1,-0.3 -2,-0.2 0.633 110.7 41.4-120.2 -27.2 -8.8 19.1 22.7 70 70 A L S < S- 0 0 26 -4,-2.1 -1,-0.3 -13,-0.1 -4,-0.0 -0.972 83.3-111.7-123.1 145.0 -8.2 15.9 20.8 71 71 A D > - 0 0 92 -2,-0.4 4,-2.2 1,-0.1 5,-0.2 -0.151 36.0-101.8 -72.6 169.0 -8.4 12.3 22.1 72 72 A E H > S+ 0 0 100 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.884 122.0 54.5 -62.2 -37.5 -5.2 10.2 22.5 73 73 A D H > S+ 0 0 122 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.934 110.1 45.8 -66.9 -41.6 -6.1 8.2 19.3 74 74 A D H > S+ 0 0 58 2,-0.2 4,-2.8 1,-0.2 5,-0.3 0.876 113.8 49.0 -67.0 -41.4 -6.3 11.4 17.2 75 75 A I H X S+ 0 0 6 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.935 113.2 47.0 -65.0 -42.4 -3.1 12.8 18.8 76 76 A E H X S+ 0 0 47 -4,-2.8 4,-2.4 1,-0.2 -2,-0.2 0.921 115.0 46.8 -63.4 -45.3 -1.3 9.5 18.0 77 77 A A H X S+ 0 0 2 -4,-2.8 4,-2.4 -5,-0.2 -68,-0.3 0.928 113.8 45.3 -66.8 -47.2 -2.6 9.4 14.5 78 78 A V H X S+ 0 0 4 -4,-2.8 4,-2.8 1,-0.2 5,-0.2 0.886 112.8 52.5 -67.7 -32.7 -1.8 13.0 13.6 79 79 A S H X S+ 0 0 0 -4,-2.3 4,-2.6 -5,-0.3 -1,-0.2 0.922 110.5 47.3 -66.1 -45.3 1.7 12.7 15.2 80 80 A N H X S+ 0 0 26 -4,-2.4 4,-2.7 2,-0.2 -2,-0.2 0.890 111.6 51.5 -63.5 -34.1 2.3 9.6 13.1 81 81 A Y H X S+ 0 0 27 -4,-2.4 4,-2.9 2,-0.2 5,-0.3 0.949 112.1 45.8 -63.8 -50.2 1.0 11.4 9.9 82 82 A V H X S+ 0 0 10 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.933 114.0 48.5 -61.9 -45.3 3.3 14.3 10.6 83 83 A Y H X S+ 0 0 77 -4,-2.6 4,-3.2 -5,-0.2 5,-0.3 0.927 113.5 47.3 -57.3 -47.9 6.3 12.1 11.3 84 84 A D H X S+ 0 0 25 -4,-2.7 4,-1.7 1,-0.2 -2,-0.2 0.902 112.9 48.6 -61.7 -44.8 5.6 10.0 8.1 85 85 A Q H <>S+ 0 0 25 -4,-2.9 5,-2.6 -5,-0.2 6,-0.7 0.911 118.1 40.8 -58.9 -45.8 5.2 13.1 6.0 86 86 A A H ><5S+ 0 0 0 -4,-2.6 3,-1.4 -5,-0.3 -50,-0.5 0.969 116.0 45.0 -69.0 -54.4 8.4 14.7 7.3 87 87 A V H 3<5S+ 0 0 49 -4,-3.2 -1,-0.2 1,-0.3 -2,-0.2 0.822 120.9 40.7 -65.1 -32.0 10.7 11.7 7.5 88 88 A N T 3<5S- 0 0 93 -4,-1.7 -1,-0.3 -5,-0.3 -2,-0.2 0.297 107.9-122.6 -97.3 3.8 9.6 10.5 4.0 89 89 A S T < 5 + 0 0 90 -3,-1.4 -3,-0.2 -4,-0.3 -4,-0.1 0.900 61.7 144.7 55.4 51.6 9.5 13.9 2.5 90 90 A K < 0 0 73 -5,-2.6 -4,-0.1 -6,-0.2 -5,-0.1 0.445 360.0 360.0-100.3 -5.1 5.9 13.6 1.4 91 91 A W 0 0 85 -6,-0.7 -67,-0.1 -57,-0.1 -56,-0.0 -0.326 360.0 360.0 -67.1 360.0 4.6 17.1 1.9