==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 24-APR-12 2LS9 . COMPND 2 MOLECULE: PLEUROCIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR L.S.VERMEER,J.KOZLOWSKA,J.A.MASON . 25 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2802.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 36.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 111 0, 0.0 3,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -96.9 19.9 -0.2 3.1 2 2 A W > + 0 0 215 1,-0.1 3,-1.1 2,-0.1 0, 0.0 0.190 360.0 100.3-114.1 13.9 16.5 -0.8 1.7 3 3 A G T 3 + 0 0 49 1,-0.3 3,-0.3 3,-0.1 -1,-0.1 0.688 65.1 77.1 -74.1 -16.2 14.5 -0.6 5.0 4 4 A S T 3 S+ 0 0 98 1,-0.2 -1,-0.3 -3,-0.2 2,-0.1 0.372 78.2 78.6 -73.7 6.4 13.5 2.9 4.1 5 5 A F X - 0 0 101 -3,-1.1 3,-1.3 2,-0.0 2,-0.8 -0.380 68.2-178.0-110.2 51.8 11.0 1.3 1.7 6 6 A F T 3 S- 0 0 152 1,-0.3 5,-0.2 -3,-0.3 -3,-0.1 -0.360 76.3 -37.9 -57.8 98.6 8.4 0.4 4.5 7 7 A K T 3> S- 0 0 148 -2,-0.8 4,-2.4 1,-0.1 3,-0.5 0.922 78.3-178.0 43.3 58.0 5.8 -1.4 2.4 8 8 A K H <> S+ 0 0 125 -3,-1.3 4,-0.8 1,-0.3 -1,-0.1 0.771 78.4 50.2 -57.2 -27.1 6.3 1.0 -0.5 9 9 A A H > S+ 0 0 75 -4,-0.2 4,-1.8 2,-0.2 -1,-0.3 0.854 110.3 47.4 -80.7 -36.7 3.6 -0.7 -2.5 10 10 A A H > S+ 0 0 56 -3,-0.5 4,-2.7 2,-0.2 -2,-0.2 0.855 105.0 60.6 -73.9 -34.8 1.0 -0.7 0.3 11 11 A H H < S+ 0 0 144 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.858 112.6 38.5 -59.8 -37.2 1.7 3.0 1.1 12 12 A V H >< S+ 0 0 105 -4,-0.8 3,-0.9 -5,-0.2 4,-0.4 0.824 113.5 56.4 -82.6 -33.7 0.6 3.8 -2.5 13 13 A G H >< S+ 0 0 40 -4,-1.8 3,-1.4 1,-0.2 -2,-0.2 0.904 99.3 57.7 -65.9 -42.0 -2.2 1.3 -2.5 14 14 A K G >< S+ 0 0 132 -4,-2.7 3,-1.6 1,-0.3 -1,-0.2 0.578 84.1 85.6 -67.5 -8.7 -4.0 2.6 0.6 15 15 A H G < S+ 0 0 139 -3,-0.9 -1,-0.3 1,-0.3 3,-0.2 0.880 94.9 42.1 -59.5 -38.0 -4.3 6.0 -1.2 16 16 A V G X S+ 0 0 94 -3,-1.4 3,-1.7 -4,-0.4 -1,-0.3 -0.240 75.5 139.4-100.8 43.6 -7.4 4.7 -2.8 17 17 A G G X> + 0 0 28 -3,-1.6 3,-1.5 1,-0.3 4,-0.8 0.613 51.2 84.1 -64.4 -12.2 -8.6 3.1 0.4 18 18 A K G 34 S+ 0 0 161 1,-0.3 -1,-0.3 -3,-0.2 3,-0.1 0.828 103.8 30.4 -60.6 -32.3 -12.1 4.3 -0.4 19 19 A A G <4 S+ 0 0 74 -3,-1.7 -1,-0.3 1,-0.1 -2,-0.2 0.099 108.1 74.6-112.0 19.2 -12.5 1.1 -2.5 20 20 A A T X4 + 0 0 17 -3,-1.5 3,-2.4 1,-0.1 5,-0.3 0.536 65.8 90.3-105.9 -10.7 -10.2 -1.0 -0.4 21 21 A L G >< S+ 0 0 98 -4,-0.8 3,-0.6 1,-0.3 -1,-0.1 0.623 75.0 72.6 -62.1 -11.2 -12.6 -1.5 2.5 22 22 A T G 3 S+ 0 0 118 1,-0.2 -1,-0.3 -3,-0.1 -2,-0.1 0.711 116.4 16.7 -76.0 -20.7 -13.8 -4.6 0.6 23 23 A H G < S+ 0 0 150 -3,-2.4 -1,-0.2 0, 0.0 -2,-0.2 -0.231 134.4 34.7-147.4 48.1 -10.5 -6.3 1.5 24 24 A Y < 0 0 183 -3,-0.6 -3,-0.2 -7,-0.0 -2,-0.1 0.217 360.0 360.0-161.0 -61.5 -9.0 -4.4 4.3 25 25 A L 0 0 189 -5,-0.3 -1,-0.0 0, 0.0 -4,-0.0 -0.652 360.0 360.0 -88.6 360.0 -11.4 -2.8 6.8