==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 24-APR-12 2LSA . COMPND 2 MOLECULE: MAGAININ-2; . SOURCE 2 SYNTHETIC: YES; . AUTHOR L.S.VERMEER,J.A.MASON . 23 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2494.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 21.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 26.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 73 0, 0.0 8,-0.1 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 140.5 -6.8 4.6 0.2 2 2 A I + 0 0 148 3,-0.1 0, 0.0 4,-0.1 0, 0.0 0.513 360.0 66.4-129.6 -20.4 -7.7 4.3 3.9 3 3 A G S S- 0 0 72 1,-0.0 0, 0.0 3,-0.0 0, 0.0 0.999 135.2 -41.8 -66.8 -72.8 -11.5 3.8 3.8 4 4 A K S > S+ 0 0 180 2,-0.1 3,-1.3 3,-0.0 4,-0.2 0.356 128.8 81.6-137.1 -6.0 -11.7 0.4 2.1 5 5 A F T >> S+ 0 0 159 1,-0.3 4,-1.6 2,-0.2 3,-0.9 0.633 78.6 76.7 -71.6 -12.6 -9.0 0.8 -0.5 6 6 A L H 3> S+ 0 0 78 1,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.645 72.2 82.8 -72.1 -13.9 -6.6 -0.0 2.3 7 7 A H H <4 S+ 0 0 147 -3,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.881 112.2 15.5 -59.9 -40.9 -7.7 -3.7 1.9 8 8 A S H X>>S+ 0 0 70 -3,-0.9 4,-3.1 -4,-0.2 5,-2.2 0.608 110.9 80.5-106.4 -18.0 -5.2 -4.1 -0.9 9 9 A A H 3<5S+ 0 0 31 -4,-1.6 8,-0.2 1,-0.3 -2,-0.2 0.789 111.0 27.7 -57.1 -25.9 -3.2 -1.0 -0.2 10 10 A K T 3<5S+ 0 0 132 -4,-1.3 -1,-0.3 3,-0.2 -2,-0.1 0.009 123.8 50.8-126.1 26.1 -1.5 -3.1 2.5 11 11 A K T <45S+ 0 0 151 -3,-1.8 -2,-0.2 0, 0.0 -3,-0.2 0.543 131.2 9.1-127.6 -35.0 -1.9 -6.5 1.0 12 12 A F T ><5S+ 0 0 153 -4,-3.1 3,-1.0 2,-0.1 -3,-0.2 0.715 134.4 46.4-110.0 -47.2 -0.6 -6.0 -2.5 13 13 A G G >>XS+ 0 0 11 -5,-2.2 4,-3.2 1,-0.2 3,-1.7 0.492 87.5 94.0 -76.4 -1.4 0.9 -2.5 -2.3 14 14 A K G 345S+ 0 0 129 -6,-0.4 4,-0.5 1,-0.3 -1,-0.2 0.849 88.5 44.0 -57.5 -36.0 2.6 -3.5 1.0 15 15 A A G <45S+ 0 0 54 -3,-1.0 -1,-0.3 2,-0.1 5,-0.2 0.339 123.3 38.4 -93.2 6.4 5.7 -4.5 -0.9 16 16 A F T X>>S+ 0 0 107 -3,-1.7 4,-1.7 3,-0.2 3,-1.4 0.712 118.8 37.6-117.2 -57.6 5.6 -1.3 -3.0 17 17 A V T 3<5S+ 0 0 82 -4,-3.2 -3,-0.2 1,-0.3 5,-0.2 0.800 121.5 48.1 -72.8 -26.4 4.4 1.6 -0.8 18 18 A G T 345S+ 0 0 117 -3,-1.4 4,-2.2 3,-0.1 3,-0.4 0.592 122.4 34.6-129.1 -70.0 9.5 -0.2 -0.1 20 20 A I T <5S+ 0 0 109 -4,-1.7 -3,-0.2 1,-0.2 -2,-0.1 0.637 113.0 62.2 -76.9 -14.1 9.9 2.0 -3.2 21 21 A M T 4