==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING/PROTEIN BINDING 01-MAY-12 2LSJ . COMPND 2 MOLECULE: DNA REPAIR PROTEIN REV1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR J.LIU,J.WOJTASZEK,P.ZHOU . 111 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6733.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 84 75.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 65 58.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 23 A A 0 0 142 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 38.5 2.1 12.6 13.8 2 24 A A - 0 0 38 2,-0.0 2,-1.7 44,-0.0 41,-0.1 -0.820 360.0 -90.0-120.1 159.9 1.1 12.3 10.1 3 25 A P + 0 0 3 0, 0.0 2,-0.4 0, 0.0 36,-0.1 -0.481 66.8 150.3 -69.8 86.2 -0.5 9.6 8.0 4 26 A N - 0 0 55 -2,-1.7 2,-0.6 34,-0.1 5,-0.3 -0.957 38.0-146.3-124.4 141.1 2.5 7.7 6.9 5 27 A L B > S-A 8 0A 0 3,-2.8 3,-1.1 -2,-0.4 12,-0.1 -0.912 80.6 -29.4-110.2 112.9 2.9 4.0 6.0 6 28 A A T 3 S- 0 0 1 -2,-0.6 -1,-0.2 1,-0.3 3,-0.1 0.791 132.5 -41.5 53.9 28.5 6.3 2.5 6.9 7 29 A G T 3 S+ 0 0 34 1,-0.2 2,-0.6 102,-0.1 -1,-0.3 0.594 113.1 126.2 94.9 13.1 7.8 5.9 6.3 8 30 A A B < +A 5 0A 0 -3,-1.1 -3,-2.8 1,-0.2 -1,-0.2 -0.915 24.1 165.5-110.6 113.7 5.7 6.7 3.2 9 31 A V + 0 0 78 -2,-0.6 -1,-0.2 -5,-0.3 2,-0.1 0.819 57.3 81.8 -91.5 -37.5 3.7 9.9 3.3 10 32 A E S > S- 0 0 137 1,-0.1 4,-1.8 -5,-0.1 -5,-0.2 -0.425 79.3-131.8 -71.4 143.4 2.9 10.1 -0.4 11 33 A F H > S+ 0 0 52 1,-0.2 4,-2.7 2,-0.2 3,-0.5 0.951 107.5 54.0 -58.8 -52.6 -0.1 8.1 -1.6 12 34 A S H > S+ 0 0 74 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.849 111.4 47.2 -51.0 -37.0 1.9 6.6 -4.6 13 35 A D H > S+ 0 0 40 2,-0.2 4,-1.3 3,-0.1 -1,-0.3 0.815 112.1 50.8 -75.2 -31.5 4.5 5.5 -2.0 14 36 A V H >X S+ 0 0 0 -4,-1.8 4,-1.9 -3,-0.5 3,-0.7 0.974 109.5 46.4 -69.8 -57.4 1.8 4.0 0.3 15 37 A K H 3X S+ 0 0 66 -4,-2.7 4,-2.6 1,-0.3 -1,-0.2 0.815 110.4 57.6 -55.1 -31.1 -0.0 1.9 -2.3 16 38 A T H 3X S+ 0 0 62 -4,-1.0 4,-1.6 -5,-0.4 -1,-0.3 0.878 105.5 48.2 -68.1 -38.8 3.4 0.7 -3.4 17 39 A L H X>S+ 0 0 43 -4,-1.6 4,-2.8 2,-0.2 3,-0.8 0.892 112.3 57.0 -75.9 -42.0 4.4 -5.5 -2.3 21 43 A W H 3<5S+ 0 0 0 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.663 112.3 45.1 -63.5 -14.8 3.5 -6.2 1.3 22 44 A I H 3<5S+ 0 0 5 -4,-1.4 -1,-0.3 -3,-0.1 -2,-0.2 0.585 121.5 36.4-102.3 -16.1 0.6 -8.2 -0.1 23 45 A T H <<5S+ 0 0 85 -3,-0.8 -2,-0.2 -4,-0.6 -3,-0.2 0.856 119.1 42.6-100.0 -55.7 2.6 -10.0 -2.7 24 46 A T T <5S+ 0 0 98 -4,-2.8 2,-0.4 1,-0.1 -3,-0.2 0.677 121.0 50.4 -66.3 -16.6 6.0 -10.7 -1.2 25 47 A I < + 0 0 26 -5,-0.6 -1,-0.1 1,-0.1 0, 0.0 -0.987 50.7 167.7-128.9 128.0 4.1 -11.7 2.0 26 48 A S S S+ 0 0 46 -2,-0.4 -1,-0.1 1,-0.2 44,-0.1 0.646 77.6 55.3-106.9 -24.3 1.2 -14.1 2.2 27 49 A D S S- 0 0 128 43,-0.0 -1,-0.2 44,-0.0 -5,-0.0 -0.705 76.5-172.2-113.9 79.1 1.1 -14.5 6.0 28 50 A P - 0 0 25 0, 0.0 2,-0.2 0, 0.0 -6,-0.0 -0.322 15.1-130.3 -69.8 151.7 0.8 -11.0 7.4 29 51 A M > - 0 0 85 1,-0.1 4,-2.5 -2,-0.0 5,-0.2 -0.600 20.1-113.0-101.3 163.9 1.0 -10.3 11.1 30 52 A E H > S+ 0 0 131 1,-0.2 4,-1.6 -2,-0.2 5,-0.1 0.850 117.9 52.8 -62.3 -35.0 -1.3 -8.4 13.4 31 53 A E H > S+ 0 0 110 2,-0.2 4,-1.5 68,-0.2 -1,-0.2 0.935 110.5 45.4 -66.6 -47.8 1.5 -5.8 13.9 32 54 A D H > S+ 0 0 5 1,-0.2 4,-0.6 2,-0.2 3,-0.4 0.930 115.0 47.1 -61.6 -47.6 2.0 -5.2 10.2 33 55 A I H >X S+ 0 0 17 -4,-2.5 4,-0.8 1,-0.2 3,-0.7 0.813 106.3 60.6 -64.5 -30.4 -1.7 -5.0 9.5 34 56 A L H >X S+ 0 0 56 -4,-1.6 4,-1.8 1,-0.2 3,-0.9 0.875 91.9 65.5 -64.7 -38.2 -2.1 -2.6 12.4 35 57 A Q H 3X S+ 0 0 61 -4,-1.5 4,-0.9 -3,-0.4 -1,-0.2 0.811 98.5 55.6 -54.0 -30.9 0.3 -0.1 10.8 36 58 A V H S+ 0 0 0 -4,-1.2 5,-2.8 -3,-0.4 4,-0.8 0.824 97.6 57.4 -54.0 -32.7 -6.7 10.4 7.1 44 66 A I H <5S+ 0 0 0 -4,-0.9 -1,-0.2 3,-0.2 -2,-0.2 0.934 113.0 36.7 -64.8 -47.7 -9.9 11.1 9.0 45 67 A E H <5S+ 0 0 142 -4,-0.8 -2,-0.2 -3,-0.3 -1,-0.2 0.839 120.4 48.1 -73.8 -34.2 -8.3 13.6 11.4 46 68 A E H <5S- 0 0 90 -4,-3.1 -1,-0.2 -5,-0.1 -2,-0.2 0.567 108.3-127.9 -81.8 -9.5 -6.1 15.0 8.6 47 69 A K T <5 + 0 0 140 -4,-0.8 3,-0.2 -5,-0.3 -3,-0.2 0.885 67.2 133.9 63.8 39.9 -9.1 15.2 6.3 48 70 A D >>< + 0 0 48 -5,-2.8 3,-1.6 1,-0.2 4,-1.1 -0.134 10.3 135.7-110.6 35.4 -7.3 13.2 3.6 49 71 A L H 3> + 0 0 59 -6,-0.4 4,-1.9 1,-0.3 5,-0.3 0.765 59.6 78.5 -53.3 -25.3 -10.2 10.8 2.8 50 72 A E H 3> S+ 0 0 163 1,-0.3 4,-0.5 -3,-0.2 -1,-0.3 0.905 100.6 36.8 -50.5 -46.6 -9.4 11.5 -0.8 51 73 A K H <> S+ 0 0 43 -3,-1.6 4,-2.9 2,-0.2 -1,-0.3 0.727 108.3 69.7 -79.1 -22.9 -6.4 9.0 -0.6 52 74 A L H X S+ 0 0 5 -4,-1.1 4,-3.4 2,-0.2 5,-0.3 0.981 99.2 44.2 -57.8 -62.2 -8.4 6.8 1.8 53 75 A D H X S+ 0 0 90 -4,-1.9 4,-1.5 1,-0.2 -1,-0.2 0.775 116.0 52.4 -54.6 -26.5 -10.9 5.6 -0.9 54 76 A L H X S+ 0 0 70 -4,-0.5 4,-1.5 -5,-0.3 -1,-0.2 0.904 113.1 40.4 -77.0 -44.0 -7.9 5.2 -3.1 55 77 A V H X S+ 0 0 0 -4,-2.9 4,-3.3 -3,-0.2 5,-0.3 0.899 115.8 51.5 -71.3 -42.0 -5.9 3.1 -0.7 56 78 A I H X S+ 0 0 2 -4,-3.4 4,-2.0 -5,-0.2 -2,-0.2 0.969 115.4 39.5 -59.1 -57.2 -8.9 1.0 0.5 57 79 A K H X S+ 0 0 116 -4,-1.5 4,-1.9 -5,-0.3 -1,-0.2 0.844 117.3 53.0 -62.1 -34.3 -10.0 0.1 -3.1 58 80 A Y H X S+ 0 0 13 -4,-1.5 4,-0.9 1,-0.2 -2,-0.2 0.962 112.7 40.6 -66.1 -53.5 -6.3 -0.4 -4.0 59 81 A M H X S+ 0 0 0 -4,-3.3 4,-3.4 1,-0.2 5,-0.3 0.786 110.9 62.7 -65.8 -27.4 -5.4 -2.8 -1.2 60 82 A K H X S+ 0 0 29 -4,-2.0 4,-2.9 -5,-0.3 5,-0.3 0.975 99.7 49.1 -61.9 -57.6 -8.8 -4.5 -1.7 61 83 A R H X S+ 0 0 116 -4,-1.9 4,-1.6 1,-0.2 -1,-0.2 0.778 117.5 46.0 -53.6 -26.8 -8.1 -5.7 -5.3 62 84 A L H X S+ 0 0 5 -4,-0.9 4,-2.0 2,-0.2 -2,-0.2 0.942 112.9 44.5 -81.4 -54.1 -4.8 -7.0 -3.9 63 85 A M H < S+ 0 0 2 -4,-3.4 9,-0.2 1,-0.2 -2,-0.2 0.790 119.7 46.2 -61.0 -27.8 -6.1 -8.7 -0.7 64 86 A Q H < S+ 0 0 96 -4,-2.9 -1,-0.2 -5,-0.3 -2,-0.2 0.928 114.7 42.7 -80.2 -50.0 -8.9 -10.1 -2.8 65 87 A Q H < S+ 0 0 136 -4,-1.6 -2,-0.2 -5,-0.3 -3,-0.2 0.706 93.1 114.2 -69.2 -19.3 -6.8 -11.3 -5.8 66 88 A S S < S- 0 0 25 -4,-2.0 6,-0.1 1,-0.1 -43,-0.1 -0.115 74.4-129.2 -52.1 149.0 -4.3 -12.6 -3.3 67 89 A V S S+ 0 0 132 2,-0.0 2,-0.5 4,-0.0 -1,-0.1 0.824 91.3 76.8 -71.1 -32.1 -3.8 -16.4 -3.2 68 90 A E > - 0 0 77 1,-0.1 3,-1.1 2,-0.0 4,-0.3 -0.701 66.9-157.6 -85.3 125.6 -4.2 -16.4 0.6 69 91 A S T >> S+ 0 0 86 -2,-0.5 3,-1.5 1,-0.2 4,-0.7 0.744 86.6 78.3 -71.5 -23.6 -7.8 -16.1 1.7 70 92 A V H 3> S+ 0 0 53 1,-0.3 4,-1.5 2,-0.2 3,-0.3 0.757 82.8 67.2 -56.4 -24.3 -6.5 -14.8 5.1 71 93 A W H <> S+ 0 0 1 -3,-1.1 4,-1.7 1,-0.2 -1,-0.3 0.858 89.0 63.5 -65.4 -35.9 -6.0 -11.5 3.3 72 94 A N H <> S+ 0 0 68 -3,-1.5 4,-1.1 -4,-0.3 -1,-0.2 0.879 105.1 46.0 -56.1 -39.9 -9.7 -11.0 2.9 73 95 A M H X S+ 0 0 130 -4,-0.7 4,-2.3 -3,-0.3 -1,-0.2 0.885 104.0 62.0 -70.8 -40.1 -10.1 -10.9 6.7 74 96 A A H X S+ 0 0 7 -4,-1.5 4,-1.9 1,-0.2 -1,-0.2 0.878 100.4 55.2 -53.0 -40.8 -7.1 -8.5 7.1 75 97 A F H X S+ 0 0 14 -4,-1.7 4,-1.9 1,-0.2 -1,-0.2 0.931 109.2 45.3 -59.3 -47.8 -9.1 -6.0 5.1 76 98 A D H X S+ 0 0 97 -4,-1.1 4,-2.7 1,-0.2 -1,-0.2 0.857 107.4 60.1 -64.6 -35.8 -12.1 -6.1 7.4 77 99 A F H X S+ 0 0 62 -4,-2.3 4,-0.7 1,-0.2 -1,-0.2 0.908 108.0 43.7 -58.9 -44.1 -9.8 -5.9 10.4 78 100 A I H >X S+ 0 0 1 -4,-1.9 4,-2.8 1,-0.2 3,-0.6 0.881 114.7 49.2 -69.2 -39.4 -8.4 -2.6 9.3 79 101 A L H 3X>S+ 0 0 7 -4,-1.9 4,-1.9 1,-0.2 5,-0.6 0.848 101.2 63.9 -68.5 -34.7 -11.9 -1.3 8.4 80 102 A D H 3<5S+ 0 0 104 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.780 115.5 32.0 -59.8 -26.8 -13.2 -2.4 11.8 81 103 A N H X>S+ 0 0 8 -4,-2.9 4,-2.6 2,-0.2 5,-1.1 0.872 105.8 49.6 -74.2 -38.5 -14.1 7.6 10.7 87 109 A Q H 3<5S+ 0 0 93 -4,-1.6 -2,-0.2 -5,-0.3 -1,-0.2 0.896 104.5 57.6 -67.1 -41.3 -17.8 7.4 11.8 88 110 A Q T 3<5S+ 0 0 165 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.663 114.7 41.5 -63.8 -14.9 -17.1 9.2 15.1 89 111 A T T <45S- 0 0 66 -3,-0.6 -2,-0.2 -4,-0.3 -1,-0.2 0.892 142.3 -4.1 -95.8 -60.6 -15.8 12.0 12.9 90 112 A Y T <5S- 0 0 90 -4,-2.6 -3,-0.2 2,-0.2 -2,-0.1 0.794 85.4-128.1-102.7 -42.7 -18.1 12.4 10.0 91 113 A G S > - 0 0 10 -69,-0.1 4,-2.1 1,-0.1 3,-1.0 -0.854 360.0-122.6-177.0 139.5 7.0 -6.5 11.1 101 209 B F H 3> S+ 0 0 23 1,-0.3 4,-2.0 -2,-0.2 5,-0.2 0.882 116.4 54.3 -54.0 -41.0 7.7 -6.1 7.4 102 210 B F H 3> S+ 0 0 0 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.779 107.5 52.3 -65.1 -26.6 6.8 -2.4 7.7 103 211 B D H <> S+ 0 0 62 -3,-1.0 4,-1.6 2,-0.2 -2,-0.2 0.922 112.5 41.3 -75.3 -46.7 9.3 -2.1 10.4 104 212 B K H X S+ 0 0 107 -4,-2.1 4,-0.6 2,-0.2 -2,-0.2 0.756 120.5 46.4 -72.2 -24.9 12.2 -3.6 8.5 105 213 B K H X S+ 0 0 72 -4,-2.0 4,-1.4 -5,-0.3 -2,-0.2 0.898 111.7 47.8 -83.0 -45.3 11.1 -1.6 5.4 106 214 B R H X S+ 0 0 89 -4,-2.3 4,-1.5 1,-0.2 -2,-0.2 0.830 113.4 50.0 -64.7 -32.5 10.6 1.7 7.1 107 215 B S H X S+ 0 0 53 -4,-1.6 4,-2.6 2,-0.2 -1,-0.2 0.759 101.9 63.3 -77.0 -25.9 14.0 1.4 8.8 108 216 B E H < S+ 0 0 147 -4,-0.6 -2,-0.2 2,-0.2 -1,-0.2 0.918 108.1 39.9 -64.4 -44.8 15.6 0.5 5.5 109 217 B R H < S+ 0 0 124 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.879 117.8 48.5 -72.2 -39.2 14.8 3.9 4.0 110 218 B I H < S+ 0 0 121 -4,-1.5 -2,-0.2 -5,-0.2 -1,-0.2 0.858 105.9 70.1 -69.0 -36.1 15.6 5.8 7.2 111 219 B S < 0 0 73 -4,-2.6 0, 0.0 -5,-0.1 0, 0.0 -0.369 360.0 360.0 -80.5 161.9 18.9 3.9 7.6 112 220 B N 0 0 208 -2,-0.1 -3,-0.1 0, 0.0 -2,-0.0 -0.981 360.0 360.0-159.6 360.0 22.0 4.5 5.4