==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 02-MAY-12 2LSM . COMPND 2 MOLECULE: DNA-PACKAGING PROTEIN FI; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; . AUTHOR A.POPOVIC,B.WU,A.M.EDWARDS,A.R.DAVIDSON,K.L.MAXWELL . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4667.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 57.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 23.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 72 A P 0 0 166 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-172.7 2.1 -0.0 -1.2 2 73 A D + 0 0 161 3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.103 360.0 70.6-161.1 25.9 2.8 -2.7 -3.8 3 74 A T - 0 0 102 2,-0.0 3,-0.1 0, 0.0 0, 0.0 0.757 60.2-167.2-112.7 -52.9 6.5 -2.2 -4.9 4 75 A V + 0 0 136 1,-0.2 2,-0.5 0, 0.0 0, 0.0 0.930 38.5 139.0 59.9 47.8 8.6 -3.2 -1.9 5 76 A I - 0 0 123 2,-0.1 2,-1.1 0, 0.0 -1,-0.2 -0.949 43.2-154.5-129.3 112.7 11.8 -1.7 -3.4 6 77 A L + 0 0 124 -2,-0.5 2,-0.4 -3,-0.1 41,-0.2 -0.728 33.8 149.5 -88.2 99.5 14.2 0.2 -1.2 7 78 A D + 0 0 109 -2,-1.1 -2,-0.1 1,-0.1 4,-0.0 -0.911 12.3 154.8-136.7 108.1 16.0 2.7 -3.5 8 79 A T - 0 0 85 -2,-0.4 -1,-0.1 2,-0.1 3,-0.0 0.086 64.9-108.8-116.7 20.3 17.3 6.0 -2.3 9 80 A S S S+ 0 0 91 1,-0.1 2,-0.3 0, 0.0 -2,-0.1 0.848 82.7 127.6 54.9 35.7 20.0 6.5 -4.9 10 81 A E - 0 0 138 2,-0.0 36,-0.2 0, 0.0 -1,-0.1 -0.627 38.8-174.6-123.3 72.4 22.5 5.9 -2.1 11 82 A L - 0 0 44 -2,-0.3 2,-0.4 34,-0.1 34,-0.2 -0.321 13.0-143.1 -66.5 148.3 24.8 3.1 -3.4 12 83 A V E -A 44 0A 31 32,-3.3 32,-2.5 2,-0.0 2,-0.5 -0.952 9.6-127.9-119.5 134.4 27.5 1.7 -1.1 13 84 A T E +A 43 0A 65 -2,-0.4 48,-0.5 30,-0.2 2,-0.3 -0.671 37.4 163.8 -82.2 123.8 31.0 0.6 -2.0 14 85 A V E -AB 42 60A 0 28,-1.9 28,-2.9 -2,-0.5 2,-0.5 -0.988 22.7-155.2-144.8 131.9 31.9 -2.9 -0.8 15 86 A V E -AB 41 59A 15 44,-2.9 44,-2.9 -2,-0.3 26,-0.2 -0.909 22.7-122.4-110.5 131.6 34.7 -5.2 -1.8 16 87 A A E - B 0 58A 1 24,-1.5 23,-1.3 -2,-0.5 42,-0.3 -0.416 15.1-165.4 -70.1 142.5 34.4 -9.0 -1.5 17 88 A L S S+ 0 0 87 40,-3.1 2,-0.3 21,-0.2 41,-0.2 0.639 73.7 26.4-100.5 -20.8 37.0 -10.7 0.7 18 89 A V S S- 0 0 68 39,-1.2 2,-0.5 19,-0.1 -1,-0.2 -0.969 102.5 -74.9-142.1 156.4 36.3 -14.3 -0.5 19 90 A K + 0 0 113 -2,-0.3 2,-0.3 19,-0.1 18,-0.2 -0.308 69.3 154.7 -53.1 102.3 34.8 -16.0 -3.6 20 91 A L B -C 36 0B 43 16,-1.2 16,-2.2 -2,-0.5 2,-0.8 -0.994 43.7-131.5-137.8 143.2 31.1 -15.2 -3.1 21 92 A H + 0 0 130 -2,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.819 33.0 177.2 -97.5 105.0 28.2 -14.9 -5.6 22 93 A T - 0 0 9 -2,-0.8 2,-0.8 2,-0.1 -2,-0.0 -0.830 25.8-141.9-109.5 146.9 26.3 -11.7 -4.9 23 94 A D + 0 0 140 -2,-0.3 2,-0.4 2,-0.0 11,-0.2 -0.793 41.2 145.5-109.7 89.4 23.3 -10.4 -6.8 24 95 A A E -D 33 0C 7 9,-1.8 9,-1.3 -2,-0.8 2,-0.6 -0.979 32.5-155.1-130.0 121.5 23.6 -6.6 -7.0 25 96 A L E -D 32 0C 120 -2,-0.4 -2,-0.0 7,-0.2 5,-0.0 -0.840 29.9-112.1 -98.6 122.5 22.5 -4.5 -10.0 26 97 A H - 0 0 33 5,-0.9 5,-0.1 -2,-0.6 18,-0.1 -0.264 32.0-176.1 -52.4 124.6 24.2 -1.2 -10.5 27 98 A A S S+ 0 0 54 3,-0.1 -1,-0.2 4,-0.1 17,-0.0 0.873 83.9 31.2 -90.8 -46.3 21.7 1.6 -9.9 28 99 A T S S+ 0 0 98 2,-0.0 2,-0.2 0, 0.0 -2,-0.1 0.804 128.5 37.5 -81.8 -31.7 23.8 4.6 -10.7 29 100 A R S S- 0 0 172 2,-0.1 2,-0.6 -4,-0.0 0, 0.0 -0.479 87.0-109.0-110.6-177.3 25.8 2.8 -13.3 30 101 A D S S+ 0 0 154 -2,-0.2 -3,-0.1 2,-0.0 -5,-0.0 -0.724 74.6 101.2-117.9 80.6 25.1 0.1 -16.0 31 102 A E - 0 0 127 -2,-0.6 -5,-0.9 -5,-0.1 -2,-0.1 -0.682 55.1-146.0-165.2 103.6 26.8 -3.1 -14.8 32 103 A P E -D 25 0C 86 0, 0.0 2,-0.5 0, 0.0 -7,-0.2 -0.299 11.2-143.4 -69.8 154.0 25.0 -6.0 -13.2 33 104 A V E +D 24 0C 18 -9,-1.3 -9,-1.8 1,-0.1 3,-0.1 -0.966 35.6 150.4-126.5 117.4 26.7 -8.2 -10.5 34 105 A A S S+ 0 0 56 -2,-0.5 2,-0.3 1,-0.4 -1,-0.1 0.586 76.0 14.9-114.5 -21.6 26.1 -11.9 -10.3 35 106 A F - 0 0 126 -14,-0.2 -1,-0.4 -11,-0.1 2,-0.3 -0.923 64.0-165.1-159.1 129.5 29.5 -13.0 -8.8 36 107 A V B -C 20 0B 6 -16,-2.2 -16,-1.2 -2,-0.3 -21,-0.0 -0.789 12.1-137.7-115.3 159.1 32.3 -11.1 -7.1 37 108 A L > - 0 0 64 -2,-0.3 3,-2.0 -18,-0.2 2,-1.7 -0.740 36.3 -87.3-113.6 162.6 35.9 -12.1 -6.4 38 109 A P T 3 S+ 0 0 68 0, 0.0 -21,-0.2 0, 0.0 -19,-0.1 -0.480 120.2 26.2 -69.8 86.0 38.2 -11.5 -3.3 39 110 A G T 3 S+ 0 0 60 -2,-1.7 2,-0.4 -23,-1.3 -22,-0.1 0.277 91.4 113.5 142.8 -7.0 39.6 -8.1 -4.2 40 111 A T < - 0 0 75 -3,-2.0 -24,-1.5 -24,-0.2 2,-0.7 -0.792 57.1-139.6 -97.4 134.3 36.9 -6.5 -6.4 41 112 A A E +A 15 0A 43 -2,-0.4 2,-0.4 -26,-0.2 -26,-0.3 -0.824 26.0 178.0 -96.2 113.8 35.0 -3.5 -5.2 42 113 A F E -A 14 0A 10 -28,-2.9 -28,-1.9 -2,-0.7 2,-0.4 -0.926 24.0-129.9-118.2 140.8 31.3 -3.6 -6.1 43 114 A R E +A 13 0A 122 -2,-0.4 2,-0.2 -30,-0.2 -30,-0.2 -0.709 34.1 166.6 -90.3 136.2 28.6 -1.1 -5.3 44 115 A V E -A 12 0A 2 -32,-2.5 -32,-3.3 -2,-0.4 -20,-0.1 -0.805 38.9 -70.5-137.8 178.6 25.3 -2.3 -3.8 45 116 A S > - 0 0 37 -2,-0.2 4,-2.4 -34,-0.2 5,-0.2 -0.263 43.1-113.7 -70.4 159.6 22.2 -1.0 -2.0 46 117 A A H > S+ 0 0 50 1,-0.2 4,-0.8 -36,-0.2 -1,-0.1 0.834 119.2 44.6 -62.7 -33.2 22.4 0.3 1.6 47 118 A G H > S+ 0 0 38 -41,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.840 111.5 51.9 -80.2 -34.9 20.3 -2.6 2.7 48 119 A V H >> S+ 0 0 54 1,-0.2 4,-2.0 2,-0.2 3,-1.2 0.946 104.6 54.9 -66.3 -49.9 22.2 -5.3 0.8 49 120 A A H 3X S+ 0 0 0 -4,-2.4 4,-3.0 1,-0.3 5,-0.4 0.853 97.7 66.7 -51.9 -37.6 25.6 -4.2 2.1 50 121 A A H 3X S+ 0 0 56 -4,-0.8 4,-1.0 1,-0.2 -1,-0.3 0.885 107.3 38.9 -51.8 -42.7 24.2 -4.6 5.6 51 122 A E H X>S+ 0 0 15 -4,-2.0 5,-1.1 1,-0.2 6,-1.0 0.955 113.1 39.5 -56.7 -54.5 27.2 -8.6 3.0 53 124 A T H 3<5S+ 0 0 56 -4,-3.0 -1,-0.2 1,-0.2 3,-0.2 0.803 115.2 54.5 -66.3 -29.4 29.3 -7.1 5.8 54 125 A E H 3<5S+ 0 0 117 -4,-1.0 -1,-0.2 -5,-0.4 -2,-0.2 0.721 101.7 58.9 -76.3 -22.0 27.2 -9.1 8.4 55 126 A R H <<5S- 0 0 139 -4,-1.6 -1,-0.2 -3,-0.5 -2,-0.2 0.756 103.3-131.8 -77.5 -25.6 28.0 -12.3 6.5 56 127 A G T <5S+ 0 0 57 -4,-0.9 -3,-0.1 2,-0.3 -2,-0.1 0.671 84.2 98.3 81.7 17.4 31.7 -11.8 7.0 57 128 A L S