==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-AUG-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 08-JUN-12 2LU7 . COMPND 2 MOLECULE: OBSCURIN-LIKE PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.PULAVARTI,A.ELETSKY,B.SATYAMOORTHY,D.K.SUKUMARAN,D.LEE,E.K . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4988.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 73.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 30.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 22 26.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 153 0, 0.0 2,-1.1 0, 0.0 74,-0.2 0.000 360.0 360.0 360.0 139.3 -5.5 7.0 8.2 2 2 A T - 0 0 44 72,-1.6 2,-0.2 1,-0.0 74,-0.1 -0.567 360.0-151.1 -73.4 95.2 -4.0 3.4 8.4 3 3 A R - 0 0 123 -2,-1.1 2,-0.3 72,-0.2 74,-0.2 -0.478 19.7-178.4 -83.9 136.3 -0.3 4.3 8.9 4 4 A V E -a 77 0A 30 72,-2.0 74,-1.6 -2,-0.2 2,-0.4 -0.990 9.6-155.6-130.6 144.0 2.8 2.2 7.7 5 5 A R E +a 78 0A 120 -2,-0.3 2,-0.2 72,-0.2 74,-0.2 -0.939 16.1 168.6-121.7 138.5 6.5 3.0 8.2 6 6 A S E -a 79 0A 12 72,-2.2 74,-2.4 -2,-0.4 6,-0.1 -0.796 27.3-117.2-137.3 178.1 9.6 1.7 6.1 7 7 A T > - 0 0 53 4,-0.3 3,-1.6 72,-0.2 2,-1.4 -0.943 37.8 -95.6-125.0 147.7 13.4 2.4 5.7 8 8 A P T 3 S+ 0 0 61 0, 0.0 49,-0.3 0, 0.0 3,-0.1 -0.397 114.9 18.9 -69.8 87.6 15.4 3.7 2.5 9 9 A G T 3 S+ 0 0 51 47,-2.2 48,-0.1 -2,-1.4 46,-0.0 0.029 107.3 88.6 144.2 -27.1 16.6 0.4 1.0 10 10 A G S < S- 0 0 29 -3,-1.6 46,-2.4 46,-0.4 45,-0.5 0.220 82.0 -76.1 -79.3-159.7 14.3 -2.3 2.6 11 11 A D - 0 0 118 44,-0.2 2,-0.5 43,-0.2 -4,-0.3 -0.712 30.2-137.1-102.5 158.2 10.9 -3.7 1.5 12 12 A L E +E 53 0B 2 41,-2.3 41,-2.3 -2,-0.2 2,-0.5 -0.945 24.1 174.7-119.2 108.2 7.4 -2.0 1.8 13 13 A E E -E 52 0B 104 -2,-0.5 2,-0.7 39,-0.2 39,-0.2 -0.961 10.1-169.2-118.3 114.9 4.5 -4.3 3.0 14 14 A L E +E 51 0B 0 37,-2.6 37,-1.7 -2,-0.5 2,-0.5 -0.896 8.8 179.8-103.6 103.3 1.0 -2.7 3.7 15 15 A V E -E 50 0B 54 -2,-0.7 2,-0.3 35,-0.2 35,-0.2 -0.934 10.9-159.8-105.6 122.1 -1.3 -5.3 5.5 16 16 A V - 0 0 1 33,-1.8 33,-0.3 -2,-0.5 -2,-0.0 -0.720 23.4-172.6-100.8 148.3 -4.8 -3.9 6.3 17 17 A H + 0 0 153 -2,-0.3 31,-0.1 31,-0.2 30,-0.1 -0.374 37.9 151.1-128.3 51.3 -7.4 -5.2 8.8 18 18 A L - 0 0 8 28,-0.2 54,-0.1 1,-0.1 53,-0.0 -0.212 59.4-107.1 -72.2 170.3 -10.3 -2.9 7.6 19 19 A S S S+ 0 0 86 52,-0.1 28,-0.1 49,-0.1 -1,-0.1 0.059 81.8 111.4 -90.7 23.9 -14.1 -3.7 7.9 20 20 A G - 0 0 6 26,-0.2 5,-0.0 51,-0.2 28,-0.0 -0.629 60.9-124.8-102.8 157.3 -14.5 -4.4 4.1 21 21 A P - 0 0 60 0, 0.0 25,-0.2 0, 0.0 4,-0.2 0.000 48.0 -73.4 -82.2-168.1 -15.2 -7.7 2.1 22 22 A G S > S+ 0 0 41 1,-0.2 3,-2.0 23,-0.1 24,-0.3 0.906 72.5 154.8 -55.2 -51.2 -13.2 -9.3 -0.9 23 23 A G T 3 S- 0 0 49 1,-0.4 -1,-0.2 45,-0.1 2,-0.1 -0.792 80.5 -90.2 106.3 -97.2 -14.4 -6.6 -3.3 24 24 A P T 3 - 0 0 93 0, 0.0 -1,-0.4 0, 0.0 2,-0.3 0.238 61.5-149.3 -69.9 126.4 -12.1 -6.8 -5.4 25 25 A V < - 0 0 5 -3,-2.0 2,-0.2 -4,-0.2 43,-0.2 -0.551 12.7-137.7 -66.6 131.6 -10.5 -4.1 -3.1 26 26 A R E -B 67 0A 122 41,-1.6 41,-2.1 -2,-0.3 2,-0.5 -0.608 5.2-144.4 -96.1 150.8 -8.2 -1.7 -5.1 27 27 A W E -B 66 0A 8 7,-0.4 7,-2.4 -2,-0.2 2,-0.3 -0.979 20.6-175.2-110.3 125.2 -4.8 -0.3 -4.2 28 28 A Y E -BC 65 33A 53 37,-1.3 37,-1.3 -2,-0.5 2,-0.3 -0.793 10.5-163.6-111.7 161.7 -4.0 3.3 -5.3 29 29 A K E > S-BC 64 32A 29 3,-1.7 3,-1.8 -2,-0.3 35,-0.2 -0.923 75.8 -17.6-146.7 122.9 -0.7 5.4 -5.0 30 30 A D T 3 S- 0 0 118 33,-2.0 34,-0.1 -2,-0.3 3,-0.1 0.687 132.7 -47.1 54.5 25.7 -0.5 9.2 -5.4 31 31 A G T 3 S+ 0 0 69 32,-0.3 2,-0.4 1,-0.2 -1,-0.3 -0.076 124.0 90.5 111.8 -30.5 -4.0 9.1 -7.2 32 32 A E E < S-C 29 0A 131 -3,-1.8 -3,-1.7 1,-0.0 -1,-0.2 -0.871 75.3-116.4-111.9 131.8 -3.4 6.1 -9.6 33 33 A R E -C 28 0A 162 -2,-0.4 2,-0.3 -5,-0.3 -5,-0.3 -0.136 24.3-125.9 -62.2 151.9 -4.1 2.4 -8.9 34 34 A L - 0 0 44 -7,-2.4 -7,-0.4 3,-0.0 2,-0.3 -0.794 17.0-149.9-101.0 142.3 -1.3 -0.3 -8.8 35 35 A A - 0 0 77 -2,-0.3 2,-0.9 1,-0.0 5,-0.1 -0.740 40.3 -81.9-105.6 157.5 -1.3 -3.6 -10.8 36 36 A S + 0 0 107 -2,-0.3 2,-0.2 5,-0.1 5,-0.2 -0.456 66.3 169.0 -61.6 97.6 0.2 -7.0 -9.9 37 37 A Q - 0 0 105 3,-1.2 5,-0.2 -2,-0.9 -3,-0.0 -0.646 51.7-102.6-109.5 163.3 3.9 -6.3 -11.0 38 38 A G S S+ 0 0 58 -2,-0.2 3,-0.1 1,-0.2 -1,-0.0 0.831 129.3 32.0 -53.9 -35.8 7.2 -8.3 -10.4 39 39 A R S S+ 0 0 146 1,-0.2 15,-1.2 14,-0.1 2,-1.1 0.766 111.8 70.2 -89.5 -33.1 8.1 -5.7 -7.7 40 40 A V E -F 53 0B 21 13,-0.2 -3,-1.2 -5,-0.1 2,-0.9 -0.713 69.0-172.4 -91.0 86.0 4.4 -5.1 -6.7 41 41 A Q E -F 52 0B 95 11,-2.4 11,-1.3 -2,-1.1 2,-0.2 -0.732 9.9-167.1 -82.8 101.2 3.4 -8.4 -4.9 42 42 A L E -F 51 0B 43 -2,-0.9 2,-0.3 9,-0.2 9,-0.2 -0.577 12.2-174.4 -89.9 152.9 -0.5 -8.1 -4.3 43 43 A E E -F 50 0B 54 7,-1.6 7,-2.3 -2,-0.2 2,-0.5 -0.965 6.7-161.6-146.5 131.8 -2.6 -10.4 -2.0 44 44 A Q E +F 49 0B 114 -2,-0.3 5,-0.2 5,-0.2 3,-0.1 -0.914 33.0 141.0-124.8 103.1 -6.5 -10.2 -1.7 45 45 A A - 0 0 51 3,-2.0 2,-1.4 -2,-0.5 4,-0.2 0.181 58.2-127.0-120.9 11.2 -8.2 -11.8 1.4 46 46 A G S S+ 0 0 2 -24,-0.3 -26,-0.2 2,-0.3 -28,-0.2 -0.620 104.9 39.0 82.7 -86.4 -10.9 -9.1 1.9 47 47 A A S S+ 0 0 55 -2,-1.4 2,-0.3 1,-0.2 -1,-0.2 0.469 123.7 51.2 -72.6 -5.4 -10.4 -8.2 5.6 48 48 A R + 0 0 117 -31,-0.1 -3,-2.0 -33,-0.0 2,-0.5 -0.878 69.2 173.9-133.7 101.2 -6.6 -8.6 4.8 49 49 A Q E - F 0 44B 0 -2,-0.3 -33,-1.8 -33,-0.3 2,-0.5 -0.947 12.3-162.8-106.1 126.6 -5.3 -6.7 1.8 50 50 A V E -EF 15 43B 11 -7,-2.3 -7,-1.6 -2,-0.5 2,-0.5 -0.953 12.1-177.2-115.8 122.1 -1.5 -6.8 1.2 51 51 A L E -EF 14 42B 0 -37,-1.7 -37,-2.6 -2,-0.5 2,-0.6 -0.978 10.3-173.7-111.3 114.5 0.5 -4.3 -1.1 52 52 A R E -EF 13 41B 74 -11,-1.3 -11,-2.4 -2,-0.5 2,-0.6 -0.932 6.0-172.7-114.4 108.3 4.3 -5.3 -1.3 53 53 A V E -EF 12 40B 13 -41,-2.3 -41,-2.3 -2,-0.6 2,-0.6 -0.906 21.7-136.8 -96.6 120.9 6.6 -2.9 -3.1 54 54 A Q S S+ 0 0 113 -15,-1.2 -43,-0.2 -2,-0.6 -44,-0.1 -0.699 82.7 21.2 -79.2 116.1 10.2 -4.3 -3.5 55 55 A G S S- 0 0 2 -2,-0.6 2,-0.9 -45,-0.5 -44,-0.2 0.940 71.0-157.7 89.6 72.4 12.8 -1.6 -2.7 56 56 A A + 0 0 0 -46,-2.4 -47,-2.2 -3,-0.2 -46,-0.4 -0.711 43.3 124.9 -80.5 102.5 11.3 1.3 -0.6 57 57 A R S S- 0 0 134 -2,-0.9 -1,-0.2 -49,-0.3 22,-0.1 0.606 79.3 -37.6-118.3 -73.6 13.5 4.4 -1.2 58 58 A S S > S+ 0 0 96 -50,-0.0 3,-1.7 3,-0.0 21,-0.2 0.670 129.8 42.5-127.7 -67.2 11.7 7.6 -2.5 59 59 A G T 3 S+ 0 0 62 1,-0.3 -3,-0.1 3,-0.0 0, 0.0 0.604 107.3 66.1 -67.1 -12.5 8.9 7.2 -5.0 60 60 A D T 3 S+ 0 0 34 -5,-0.1 2,-0.4 -7,-0.0 -1,-0.3 0.613 86.9 84.8 -82.9 -17.5 7.6 4.2 -2.9 61 61 A A < + 0 0 29 -3,-1.7 2,-0.3 18,-0.1 17,-0.2 -0.724 66.0 84.7 -84.6 134.2 6.8 6.7 -0.1 62 62 A G E S- D 0 77A 11 15,-1.8 15,-1.3 -2,-0.4 2,-0.6 -0.946 81.4 -48.6 161.0-178.6 3.4 8.4 -0.4 63 63 A E E - D 0 76A 110 -2,-0.3 -33,-2.0 13,-0.2 -32,-0.3 -0.780 50.8-168.1 -87.1 117.7 -0.4 8.2 0.3 64 64 A Y E -BD 29 75A 5 11,-1.8 11,-2.6 -2,-0.6 2,-0.4 -0.633 11.4-143.3 -94.6 157.0 -1.9 4.8 -0.8 65 65 A L E -BD 28 74A 47 -37,-1.3 2,-1.3 9,-0.2 -37,-1.3 -0.909 6.7-164.7-127.9 105.6 -5.7 4.1 -1.0 66 66 A C E -BD 27 73A 0 7,-2.5 7,-2.3 -2,-0.4 2,-1.4 -0.742 20.8-157.8 -82.9 88.2 -7.0 0.6 0.0 67 67 A D E -B 26 0A 37 -41,-2.1 -41,-1.6 -2,-1.3 5,-0.2 -0.593 13.5-177.7 -79.4 86.7 -10.4 1.1 -1.6 68 68 A A >> - 0 0 3 -2,-1.4 3,-0.7 -43,-0.2 4,-0.5 -0.719 37.7-114.1 -81.0 140.6 -12.8 -1.4 0.1 69 69 A P T 34 S+ 0 0 84 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.744 111.2 9.7 -46.3 -35.9 -16.5 -1.4 -1.3 70 70 A Q T 34 S+ 0 0 150 1,-0.1 -51,-0.0 -49,-0.1 -3,-0.0 0.333 137.8 42.3-124.2 0.4 -18.0 -0.0 2.0 71 71 A D T <4 + 0 0 36 -3,-0.7 2,-0.3 -50,-0.1 -51,-0.2 -0.282 66.6 177.2-156.5 49.5 -14.8 0.9 4.0 72 72 A S < - 0 0 51 -4,-0.5 2,-0.3 -5,-0.2 -5,-0.3 -0.485 13.9-172.9 -66.8 121.6 -12.2 2.7 1.7 73 73 A R E - D 0 66A 97 -7,-2.3 -7,-2.5 -2,-0.3 2,-0.3 -0.948 19.5-132.1-127.5 142.7 -9.1 3.8 3.8 74 74 A I E - D 0 65A 62 -2,-0.3 -72,-1.6 -9,-0.2 2,-0.6 -0.675 16.7-140.8 -91.1 139.9 -5.9 5.9 3.1 75 75 A F E - D 0 64A 0 -11,-2.6 -11,-1.8 -2,-0.3 2,-1.2 -0.921 1.9-150.1-102.1 114.9 -2.4 4.7 4.1 76 76 A L E - D 0 63A 75 -2,-0.6 -72,-2.0 -13,-0.2 2,-0.6 -0.756 28.6-178.2 -77.4 93.9 0.1 7.3 5.4 77 77 A V E +aD 4 62A 5 -15,-1.3 -15,-1.8 -2,-1.2 2,-0.5 -0.906 6.7 178.8-105.4 113.1 3.3 5.5 4.1 78 78 A S E -a 5 0A 40 -74,-1.6 -72,-2.2 -2,-0.6 2,-0.9 -0.967 21.5-154.8-118.1 117.6 6.6 7.2 5.0 79 79 A V E +a 6 0A 21 -2,-0.5 -72,-0.2 -74,-0.2 2,-0.2 -0.848 49.6 131.2 -84.8 106.3 10.0 5.7 3.9 80 80 A E + 0 0 66 -74,-2.4 -2,-0.0 -2,-0.9 -75,-0.0 -0.714 17.0 77.0-144.4-174.0 12.2 7.3 6.7 81 81 A E 0 0 108 -2,-0.2 -1,-0.2 -74,-0.2 0, 0.0 0.987 360.0 360.0 59.8 81.2 14.9 6.5 9.4 82 82 A P 0 0 175 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.919 360.0 360.0 -41.4 360.0 18.2 6.2 7.2