==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-FEB-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 19-JUN-12 2LUQ . COMPND 2 MOLECULE: RIBONUCLEASE 3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR Z.WANG,J.FEIGON . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5964.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 67.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 18.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 32.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 364 A G 0 0 120 0, 0.0 2,-1.2 0, 0.0 53,-0.0 0.000 360.0 360.0 360.0-145.3 -3.2 -11.7 12.1 2 365 A S + 0 0 65 61,-0.0 2,-0.4 2,-0.0 65,-0.1 -0.632 360.0 154.5 -95.0 77.2 -4.4 -8.2 11.7 3 366 A L - 0 0 64 -2,-1.2 2,-0.1 63,-0.0 57,-0.1 -0.829 23.5-160.9-107.4 144.5 -6.1 -8.4 8.3 4 367 A D - 0 0 64 -2,-0.4 3,-0.2 55,-0.1 59,-0.1 -0.360 23.9-120.0-108.7-170.5 -8.9 -6.2 7.0 5 368 A M S S+ 0 0 173 1,-0.2 2,-0.4 -2,-0.1 3,-0.1 0.840 101.2 21.5 -99.9 -47.8 -11.5 -6.5 4.2 6 369 A N S > S+ 0 0 78 1,-0.1 4,-1.8 2,-0.1 5,-0.2 -0.673 71.4 137.8-126.3 78.8 -10.8 -3.5 1.9 7 370 A A H > S+ 0 0 0 -2,-0.4 4,-3.7 2,-0.2 5,-0.4 0.949 78.0 43.5 -82.9 -58.5 -7.2 -2.4 2.5 8 371 A K H > S+ 0 0 63 1,-0.2 4,-1.4 2,-0.2 -1,-0.1 0.788 121.7 46.4 -58.6 -25.1 -6.0 -1.7 -1.1 9 372 A R H > S+ 0 0 171 2,-0.2 4,-1.8 3,-0.2 -2,-0.2 0.951 116.0 40.3 -80.1 -56.9 -9.4 -0.1 -1.5 10 373 A Q H X S+ 0 0 100 -4,-1.8 4,-3.1 2,-0.2 3,-0.2 0.952 119.1 48.1 -57.9 -49.8 -9.4 2.0 1.7 11 374 A L H X>S+ 0 0 1 -4,-3.7 4,-2.5 2,-0.3 5,-1.1 0.972 107.9 53.1 -53.0 -62.0 -5.8 2.9 1.2 12 375 A Y H <5S+ 0 0 141 -4,-1.4 -1,-0.3 -5,-0.4 -2,-0.2 0.826 114.1 45.9 -44.3 -33.5 -6.2 3.8 -2.4 13 376 A S H <5S+ 0 0 85 -4,-1.8 -1,-0.3 -3,-0.2 -2,-0.3 0.912 119.0 40.8 -74.7 -45.7 -9.0 6.0 -1.1 14 377 A L H <5S- 0 0 38 -4,-3.1 -2,-0.2 -5,-0.1 -3,-0.2 0.990 145.6 -6.6 -66.3 -65.7 -6.8 7.3 1.7 15 378 A I T <5S+ 0 0 0 -4,-2.5 -3,-0.2 -5,-0.1 5,-0.2 0.817 95.6 122.8-100.9 -44.3 -3.4 7.8 -0.1 16 379 A G < + 0 0 9 -5,-1.1 2,-0.3 -8,-0.1 3,-0.0 0.149 36.7 160.6 -24.9 114.8 -4.1 6.3 -3.5 17 380 A Y >> - 0 0 80 1,-0.1 4,-1.4 65,-0.0 3,-0.5 -0.996 52.1-127.3-148.4 141.8 -3.4 9.0 -6.0 18 381 A A T 34 S+ 0 0 72 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.1 0.750 117.4 46.3 -58.0 -23.5 -2.6 9.1 -9.8 19 382 A S T 34 S+ 0 0 47 1,-0.1 -1,-0.3 71,-0.1 -3,-0.1 0.725 109.0 52.9 -90.3 -25.9 0.4 11.1 -8.8 20 383 A L T <4 S- 0 0 7 -3,-0.5 24,-2.9 -5,-0.2 25,-0.3 0.612 83.0-162.8 -84.0 -13.2 1.5 8.8 -6.0 21 384 A R < - 0 0 184 -4,-1.4 -3,-0.1 22,-0.2 -5,-0.1 0.791 18.3-171.7 30.7 46.3 1.4 5.8 -8.3 22 385 A L + 0 0 18 -5,-0.5 2,-0.3 21,-0.2 21,-0.3 -0.296 8.7 171.3 -63.6 148.5 1.3 3.6 -5.2 23 386 A H E -A 42 0A 75 19,-2.5 19,-1.3 -3,-0.1 2,-0.5 -0.957 33.9-108.0-153.2 170.5 1.6 -0.1 -5.9 24 387 A Y E -A 41 0A 79 -2,-0.3 2,-0.4 17,-0.2 17,-0.2 -0.925 27.7-160.6-110.8 124.4 2.1 -3.5 -4.3 25 388 A V E -A 40 0A 24 15,-1.6 15,-1.5 -2,-0.5 2,-0.8 -0.870 12.8-137.7-106.3 135.2 5.4 -5.3 -4.7 26 389 A T E +A 39 0A 63 -2,-0.4 13,-0.2 13,-0.2 3,-0.1 -0.804 29.2 165.1 -95.5 107.8 5.8 -9.1 -4.1 27 390 A V E S+ 0 0 77 11,-1.5 2,-0.3 -2,-0.8 -1,-0.2 0.819 72.5 8.9 -86.6 -35.2 8.9 -9.9 -2.1 28 391 A K E -A 38 0A 62 10,-1.0 10,-2.1 28,-0.0 -1,-0.3 -0.968 65.3-166.4-144.0 157.8 7.9 -13.4 -1.3 29 392 A K E - 0 0 126 -2,-0.3 7,-0.5 8,-0.3 8,-0.1 -0.885 41.1 -68.1-139.3 169.8 5.1 -15.9 -2.3 30 393 A P E +A 35 0A 58 0, 0.0 2,-0.3 0, 0.0 7,-0.1 -0.376 60.0 165.0 -62.8 131.6 3.7 -19.2 -1.2 31 394 A T - 0 0 55 3,-1.8 5,-0.1 -2,-0.1 -3,-0.0 -0.951 52.0-101.6-145.5 163.5 6.0 -22.1 -1.7 32 395 A A S S+ 0 0 109 -2,-0.3 -1,-0.1 1,-0.2 0, 0.0 0.914 125.7 41.3 -51.1 -48.3 6.5 -25.7 -0.6 33 396 A V S S+ 0 0 119 1,-0.3 -1,-0.2 -3,-0.1 0, 0.0 0.878 137.6 11.3 -68.3 -39.5 9.2 -24.7 1.9 34 397 A D - 0 0 72 -5,-0.1 -3,-1.8 2,-0.1 2,-1.4 -0.846 60.7-161.6-146.6 105.1 7.2 -21.6 3.0 35 398 A P E +A 30 0A 84 0, 0.0 2,-0.3 0, 0.0 -3,-0.1 -0.147 62.0 106.8 -78.0 42.6 3.5 -21.1 2.0 36 399 A N E - 0 0 65 -2,-1.4 2,-0.3 -7,-0.5 19,-0.2 -0.825 52.9-153.6-121.4 161.3 3.8 -17.4 2.8 37 400 A S E - B 0 54A 0 17,-2.0 17,-2.1 -2,-0.3 2,-0.4 -0.960 4.1-149.9-133.8 151.3 4.0 -14.2 0.8 38 401 A I E -AB 28 53A 53 -10,-2.1 -11,-1.5 -2,-0.3 -10,-1.0 -0.931 14.0-177.7-122.9 146.4 5.4 -10.7 1.4 39 402 A V E -AB 26 52A 0 13,-1.7 13,-1.6 -2,-0.4 2,-0.4 -0.999 13.3-165.9-145.6 148.0 4.3 -7.3 0.0 40 403 A E E -AB 25 51A 50 -15,-1.5 -15,-1.6 -2,-0.3 2,-1.3 -0.971 21.1-137.6-135.2 117.0 5.4 -3.7 0.2 41 404 A C E -AB 24 50A 1 9,-0.9 8,-2.4 -2,-0.4 9,-1.7 -0.596 35.0-179.9 -77.4 95.3 3.2 -0.8 -0.9 42 405 A R E -AB 23 48A 91 -2,-1.3 -19,-2.5 -19,-1.3 2,-0.3 -0.251 12.2-144.6 -87.7 178.5 5.6 1.4 -2.8 43 406 A V > - 0 0 1 4,-1.4 3,-3.8 -21,-0.3 4,-0.5 -0.968 36.1 -91.5-144.5 158.3 4.9 4.7 -4.5 44 407 A G T 3 S+ 0 0 57 -24,-2.9 -23,-0.1 1,-0.3 -24,-0.1 0.727 121.6 69.0 -39.5 -26.7 6.0 6.7 -7.6 45 408 A D T 3 S- 0 0 127 -25,-0.3 -1,-0.3 2,-0.2 3,-0.1 0.406 115.0-117.4 -76.4 4.2 8.6 8.2 -5.3 46 409 A G S < S+ 0 0 57 -3,-3.8 2,-0.3 1,-0.3 -2,-0.2 0.565 78.2 124.0 71.1 6.3 10.3 4.8 -5.2 47 410 A T - 0 0 73 -4,-0.5 -4,-1.4 -6,-0.0 2,-0.7 -0.716 63.7-124.6-101.2 151.3 9.6 4.8 -1.4 48 411 A V E +B 42 0A 57 -2,-0.3 -6,-0.3 -6,-0.2 -7,-0.1 -0.845 27.4 173.2 -98.5 113.4 7.6 2.1 0.5 49 412 A L E + 0 0 15 -8,-2.4 2,-0.3 -2,-0.7 -7,-0.2 0.814 68.6 21.6 -85.8 -33.5 4.7 3.5 2.5 50 413 A G E -B 41 0A 3 -9,-1.7 -9,-0.9 18,-0.1 2,-0.3 -0.855 55.3-170.6-133.2 168.9 3.3 0.1 3.5 51 414 A T E +B 40 0A 65 13,-0.4 2,-0.3 -11,-0.3 -11,-0.3 -0.814 13.6 168.8-162.0 115.7 4.3 -3.5 4.0 52 415 A G E -B 39 0A 2 -13,-1.6 -13,-1.7 -2,-0.3 2,-0.3 -0.960 18.6-148.4-134.1 152.0 2.1 -6.5 4.7 53 416 A V E +B 38 0A 60 -2,-0.3 2,-0.3 -15,-0.2 -15,-0.2 -0.895 26.0 152.4-117.7 146.8 2.5 -10.3 4.7 54 417 A G E -B 37 0A 6 -17,-2.1 -17,-2.0 -2,-0.3 6,-0.1 -0.988 60.1 -83.8-163.8 167.2 -0.1 -12.9 3.9 55 418 A R S S+ 0 0 179 -2,-0.3 2,-0.2 -19,-0.2 -1,-0.1 0.875 115.7 6.5 -42.5 -44.5 -0.7 -16.4 2.6 56 419 A N S > S- 0 0 68 -27,-0.1 4,-1.7 -19,-0.1 -19,-0.3 -0.579 98.0 -81.6-126.8-170.7 -0.5 -15.0 -0.9 57 420 A I H > S+ 0 0 56 -2,-0.2 4,-1.7 2,-0.2 -5,-0.1 0.642 125.9 55.3 -71.4 -13.5 0.4 -11.6 -2.5 58 421 A K H > S+ 0 0 104 2,-0.2 4,-5.0 3,-0.2 5,-0.2 0.952 106.4 43.8 -82.9 -58.3 -3.2 -10.5 -1.7 59 422 A I H > S+ 0 0 40 2,-0.2 4,-2.8 1,-0.2 -2,-0.2 0.885 120.1 46.4 -54.9 -36.4 -3.3 -11.1 2.0 60 423 A A H X S+ 0 0 0 -4,-1.7 4,-3.0 2,-0.2 -1,-0.2 0.978 114.8 44.9 -67.9 -54.9 0.1 -9.5 2.1 61 424 A G H X S+ 0 0 4 -4,-1.7 4,-3.4 2,-0.2 5,-0.3 0.915 114.9 49.9 -54.0 -45.0 -0.9 -6.7 -0.2 62 425 A I H X S+ 0 0 15 -4,-5.0 4,-2.8 1,-0.2 5,-0.3 0.983 112.7 45.3 -55.2 -61.8 -4.1 -6.3 1.9 63 426 A R H X S+ 0 0 80 -4,-2.8 4,-2.9 -5,-0.2 -1,-0.2 0.833 118.5 45.5 -50.4 -39.0 -2.2 -6.2 5.2 64 427 A A H X>S+ 0 0 0 -4,-3.0 4,-3.6 2,-0.2 5,-0.6 0.986 110.7 48.2 -70.9 -62.6 0.3 -3.8 3.6 65 428 A A H X5S+ 0 0 0 -4,-3.4 4,-2.2 1,-0.2 -2,-0.2 0.917 121.7 40.0 -42.6 -50.6 -2.1 -1.4 1.9 66 429 A E H X5S+ 0 0 3 -4,-2.8 4,-3.5 -5,-0.3 -1,-0.2 0.956 112.1 55.9 -62.3 -54.2 -4.0 -1.3 5.2 67 430 A N H X5S+ 0 0 62 -4,-2.9 4,-0.8 -5,-0.3 -2,-0.2 0.925 115.9 37.2 -45.0 -55.6 -0.8 -1.3 7.3 68 431 A A H ><5S+ 0 0 0 -4,-3.6 3,-0.7 1,-0.2 -1,-0.3 0.864 115.6 56.6 -64.8 -35.8 0.4 1.8 5.5 69 432 A L H 3<>S+ 0 0 142 -2,-0.8 4,-2.9 2,-0.2 5,-0.6 0.973 78.0 60.9 -69.3 -57.8 -2.6 8.8 9.2 73 436 A K H >5S+ 0 0 183 1,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.872 111.1 42.0 -37.0 -52.0 0.4 11.1 9.2 74 437 A M H >5S+ 0 0 68 2,-0.2 4,-3.7 3,-0.2 5,-0.3 0.946 114.1 53.2 -62.9 -45.8 1.5 9.4 5.9 75 438 A L H X5S+ 0 0 11 -4,-1.7 4,-3.1 1,-0.3 5,-0.2 0.969 114.5 39.6 -48.6 -64.1 -2.1 9.5 4.7 76 439 A D H X5S+ 0 0 100 -4,-2.9 4,-1.5 1,-0.2 -1,-0.3 0.680 115.9 57.5 -60.1 -18.8 -2.3 13.2 5.4 77 440 A F H X< S+ 0 0 65 -4,-3.0 3,-0.8 1,-0.3 -2,-0.2 0.883 117.3 35.2 -39.4 -49.6 -1.3 15.7 -3.8 83 446 A A H 3< S+ 0 0 86 -4,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.833 115.9 57.3 -74.0 -33.2 -2.5 19.2 -3.1 84 447 A A T 3< S+ 0 0 68 -4,-2.0 -1,-0.3 -5,-0.4 -2,-0.2 -0.083 80.5 133.7 -87.8 32.9 1.1 20.2 -2.4 85 448 A I < - 0 0 31 -3,-0.8 3,-0.2 1,-0.2 -3,-0.1 -0.762 45.9-158.7 -90.6 125.2 2.1 19.0 -5.9 86 449 A P S S+ 0 0 106 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 0.930 82.7 20.2 -66.2 -47.8 4.4 21.5 -7.8 87 450 A R + 0 0 207 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.974 69.9 171.7-130.9 119.9 3.6 20.1 -11.2 88 451 A S + 0 0 48 -2,-0.4 -69,-0.0 -3,-0.2 -3,-0.0 -0.990 15.1 169.1-131.3 128.1 0.5 18.0 -12.0 89 452 A E 0 0 185 -2,-0.4 -1,-0.1 1,-0.1 -70,-0.0 0.675 360.0 360.0-105.0 -26.8 -0.8 16.9 -15.4 90 453 A S 0 0 111 -72,-0.0 -72,-0.1 0, 0.0 -1,-0.1 0.259 360.0 360.0 -93.2 360.0 -3.5 14.5 -14.3