==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 22-JUN-12 2LUY . COMPND 2 MOLECULE: MEIOTIC CHROMOSOME SEGREGATION PROTEIN P8B7.28C; . SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; . AUTHOR C.HE,Y.SHI,E.BAYNE,J.WU . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8432.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 41.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 13.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 31 A M 0 0 221 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 14.3 3.5 26.7 -5.6 2 32 A G + 0 0 30 5,-0.0 4,-0.1 0, 0.0 0, 0.0 0.478 360.0 145.4 142.2 36.6 2.5 23.3 -7.0 3 33 A K S S- 0 0 184 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.924 95.1 -41.1 -62.3 -45.4 -1.1 23.4 -8.1 4 34 A N S > S+ 0 0 110 0, 0.0 3,-0.8 0, 0.0 -1,-0.1 0.279 123.9 89.0-164.4 -0.5 -0.5 21.0 -11.0 5 35 A D G > S+ 0 0 98 1,-0.2 3,-0.6 2,-0.1 -2,-0.0 0.407 72.3 79.3 -87.0 2.1 2.8 22.2 -12.5 6 36 A N G 3 + 0 0 76 1,-0.2 15,-0.5 -4,-0.1 -1,-0.2 0.347 70.0 83.7 -89.6 6.0 4.7 19.9 -10.1 7 37 A D G < + 0 0 114 -3,-0.8 -1,-0.2 13,-0.1 -2,-0.1 0.263 61.8 132.6 -90.6 11.4 3.8 16.9 -12.4 8 38 A A < - 0 0 38 -3,-0.6 13,-0.5 1,-0.0 2,-0.5 -0.391 43.4-155.7 -65.4 138.5 6.9 17.8 -14.6 9 39 A L E -A 20 0A 113 11,-0.2 2,-0.5 -2,-0.1 11,-0.3 -0.963 1.3-157.0-123.1 117.5 9.1 14.8 -15.4 10 40 A I E -A 19 0A 24 9,-1.8 9,-1.4 -2,-0.5 2,-0.3 -0.801 17.1-130.3 -96.4 128.6 12.7 15.3 -16.3 11 41 A M E -A 18 0A 119 -2,-0.5 37,-0.4 7,-0.2 2,-0.4 -0.582 18.3-136.0 -77.7 134.0 14.5 12.7 -18.4 12 42 A C - 0 0 0 5,-1.8 4,-0.3 -2,-0.3 37,-0.2 -0.741 8.0-158.7 -91.7 135.3 17.8 11.4 -17.0 13 43 A M S S+ 0 0 99 35,-1.1 -1,-0.1 -2,-0.4 36,-0.1 0.527 88.9 58.1 -88.5 -6.8 20.6 11.0 -19.5 14 44 A R S S+ 0 0 180 34,-0.3 -1,-0.1 3,-0.1 35,-0.1 0.949 126.6 9.2 -85.3 -60.8 22.4 8.6 -17.2 15 45 A C S S- 0 0 55 2,-0.2 -2,-0.1 0, 0.0 3,-0.1 0.106 94.8-123.7-107.5 20.2 19.9 5.8 -16.7 16 46 A R + 0 0 202 -4,-0.3 2,-0.4 1,-0.2 -3,-0.2 0.824 64.6 146.3 40.8 36.9 17.5 7.1 -19.3 17 47 A K - 0 0 108 -7,-0.0 -5,-1.8 -5,-0.0 2,-0.5 -0.884 42.3-145.2-108.1 134.4 14.9 7.1 -16.5 18 48 A V E +A 11 0A 76 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.854 31.2 153.7-101.6 128.9 12.1 9.7 -16.4 19 49 A K E -A 10 0A 81 -9,-1.4 -9,-1.8 -2,-0.5 2,-0.1 -0.909 35.5-111.3-145.2 170.6 11.0 10.9 -13.0 20 50 A G E >> -A 9 0A 12 -2,-0.3 3,-0.9 -11,-0.3 4,-0.7 -0.255 57.8 -71.0 -95.7-175.0 9.4 13.9 -11.3 21 51 A I T 34 S+ 0 0 39 -13,-0.5 8,-0.1 -15,-0.5 -12,-0.1 0.598 127.6 72.0 -54.2 -6.6 10.7 16.4 -8.8 22 52 A D T 34 S+ 0 0 134 1,-0.2 -1,-0.2 3,-0.1 4,-0.1 0.970 105.6 29.7 -74.2 -55.3 10.7 13.4 -6.4 23 53 A S T <4 S+ 0 0 33 -3,-0.9 28,-1.0 2,-0.1 2,-0.5 0.305 116.0 79.6 -86.2 9.4 13.6 11.5 -7.9 24 54 A Y S < S- 0 0 0 -4,-0.7 26,-0.1 26,-0.2 -1,-0.0 -0.975 84.9-119.5-123.2 127.6 15.1 14.8 -9.0 25 55 A S > - 0 0 30 -2,-0.5 4,-3.5 24,-0.3 5,-0.3 -0.234 23.2-121.4 -59.7 148.8 17.0 17.1 -6.7 26 56 A K H > S+ 0 0 143 1,-0.2 4,-2.2 2,-0.2 -1,-0.1 0.890 114.3 50.3 -59.6 -40.1 15.6 20.6 -6.2 27 57 A T H > S+ 0 0 92 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.932 115.2 41.6 -64.1 -46.7 18.8 22.1 -7.5 28 58 A Q H >4 S+ 0 0 13 1,-0.2 3,-0.6 2,-0.2 -2,-0.2 0.905 114.6 51.4 -67.7 -42.2 18.9 19.9 -10.6 29 59 A W H >< S+ 0 0 51 -4,-3.5 3,-1.9 1,-0.2 -1,-0.2 0.869 103.1 59.8 -62.5 -36.9 15.1 20.3 -11.2 30 60 A S H >< S+ 0 0 49 -4,-2.2 3,-2.1 1,-0.3 -1,-0.2 0.815 90.8 69.2 -61.2 -30.7 15.5 24.0 -11.0 31 61 A K T << S+ 0 0 120 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.587 79.1 81.7 -65.0 -7.6 17.9 23.9 -13.9 32 62 A T T < S+ 0 0 16 -3,-1.9 11,-2.7 -4,-0.2 2,-0.3 0.698 102.8 26.4 -70.4 -18.5 14.8 22.9 -15.9 33 63 A F E < -B 42 0B 63 -3,-2.1 9,-0.3 9,-0.3 2,-0.2 -0.983 69.3-160.0-144.5 153.4 14.0 26.6 -16.1 34 64 A T E -B 41 0B 70 7,-3.0 7,-2.5 -2,-0.3 2,-0.6 -0.769 26.5-103.9-128.0 172.4 15.9 29.9 -16.0 35 65 A F E +B 40 0B 150 -2,-0.2 2,-0.4 5,-0.2 5,-0.2 -0.892 38.6 173.3-104.8 122.3 15.1 33.6 -15.3 36 66 A V E > -B 39 0B 67 3,-2.4 3,-2.9 -2,-0.6 -2,-0.0 -0.992 68.7 -16.1-130.9 134.3 14.9 36.0 -18.3 37 67 A R T 3 S- 0 0 253 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.771 127.3 -58.4 46.5 26.5 13.9 39.6 -18.4 38 68 A G T 3 S+ 0 0 58 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.784 117.1 116.0 75.6 27.4 12.5 38.8 -14.9 39 69 A R E < S-B 36 0B 183 -3,-2.9 -3,-2.4 2,-0.0 -1,-0.2 -0.995 71.1-113.0-133.2 133.7 10.2 36.1 -16.4 40 70 A T E +B 35 0B 91 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.414 40.7 179.7 -64.4 131.4 10.3 32.4 -15.7 41 71 A V E -B 34 0B 47 -7,-2.5 -7,-3.0 -2,-0.1 2,-0.4 -0.997 27.8-120.7-138.2 141.2 11.4 30.4 -18.8 42 72 A S E -B 33 0B 108 -2,-0.4 -9,-0.3 -9,-0.3 -10,-0.1 -0.642 36.5-110.9 -82.1 132.8 11.9 26.7 -19.5 43 73 A V - 0 0 37 -11,-2.7 -1,-0.1 -2,-0.4 -12,-0.0 -0.327 16.3-134.7 -62.2 140.8 15.4 25.6 -20.5 44 74 A S S S+ 0 0 120 1,-0.3 -1,-0.1 -2,-0.0 -12,-0.0 0.902 95.8 2.4 -63.0 -42.2 15.6 24.5 -24.1 45 75 A D S S- 0 0 110 2,-0.0 2,-0.6 -3,-0.0 -1,-0.3 -0.622 74.7-170.2-149.2 83.5 17.7 21.5 -23.2 46 76 A P - 0 0 44 0, 0.0 2,-0.7 0, 0.0 -14,-0.1 -0.663 10.2-154.7 -80.5 118.7 18.4 21.0 -19.4 47 77 A K + 0 0 147 -2,-0.6 2,-0.3 -16,-0.1 -35,-0.1 -0.843 31.8 143.3 -98.8 114.0 21.0 18.3 -18.7 48 78 A V - 0 0 5 -2,-0.7 -35,-1.1 -37,-0.4 -34,-0.3 -0.927 32.3-142.3-143.7 166.2 20.7 16.8 -15.3 49 79 A I - 0 0 37 -2,-0.3 -24,-0.3 -37,-0.2 -21,-0.1 -0.777 30.5 -88.1-126.5 170.4 21.1 13.4 -13.6 50 80 A C > - 0 0 4 -2,-0.2 4,-1.5 -26,-0.1 -26,-0.2 -0.289 37.0-111.7 -75.5 164.0 19.3 11.4 -10.8 51 81 A R T 4 S+ 0 0 118 -28,-1.0 -1,-0.1 1,-0.2 -27,-0.1 0.852 122.3 40.0 -63.9 -35.5 20.2 11.7 -7.1 52 82 A T T 4 S+ 0 0 122 -29,-0.2 -1,-0.2 1,-0.2 4,-0.1 0.746 108.0 62.9 -84.5 -25.7 21.6 8.2 -7.2 53 83 A C T 4 S+ 0 0 30 2,-0.1 -2,-0.2 0, 0.0 -1,-0.2 0.823 91.3 80.4 -67.4 -32.2 23.2 8.6 -10.6 54 84 A Q S < S- 0 0 76 -4,-1.5 2,-0.0 1,-0.1 0, 0.0 -0.473 92.6-102.9 -77.0 148.4 25.4 11.3 -9.2 55 85 A P - 0 0 115 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.288 34.6-174.2 -68.1 153.7 28.6 10.3 -7.3 56 86 A K + 0 0 187 -4,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.748 19.1 141.1-155.7 101.7 28.7 10.5 -3.5 57 87 A Q - 0 0 187 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.989 19.1-175.7-143.2 150.6 31.8 9.9 -1.4 58 88 A H - 0 0 110 -2,-0.3 2,-0.1 13,-0.0 -2,-0.0 -0.995 28.8-112.2-149.1 140.5 33.5 11.4 1.6 59 89 A D + 0 0 101 -2,-0.3 13,-1.0 12,-0.0 2,-0.3 -0.398 39.8 176.4 -71.1 147.4 36.7 10.8 3.5 60 90 A S E -C 71 0C 67 11,-0.2 2,-0.4 12,-0.1 11,-0.3 -0.932 23.8-130.0-146.6 167.7 36.5 9.3 7.0 61 91 A I E -C 70 0C 16 9,-3.0 9,-1.3 -2,-0.3 2,-0.4 -0.987 20.5-127.1-128.2 132.5 38.8 8.1 9.8 62 92 A W E -C 69 0C 171 -2,-0.4 2,-0.4 7,-0.2 7,-0.2 -0.629 23.9-153.9 -79.0 127.5 38.6 4.7 11.6 63 93 A C - 0 0 0 5,-1.0 5,-0.4 -2,-0.4 4,-0.4 -0.851 16.9-170.7-104.3 136.4 38.4 5.1 15.4 64 94 A T S S+ 0 0 53 21,-0.8 -1,-0.1 -2,-0.4 22,-0.1 0.456 79.8 74.7-100.5 -4.0 39.6 2.4 17.8 65 95 A A S S+ 0 0 46 20,-0.3 -1,-0.1 1,-0.1 21,-0.1 0.878 123.7 3.4 -74.4 -39.1 38.2 4.1 20.8 66 96 A C S S- 0 0 42 2,-0.2 -2,-0.2 0, 0.0 -1,-0.1 0.391 96.1-124.1-124.4 -5.0 34.6 3.1 20.0 67 97 A Q + 0 0 156 -4,-0.4 2,-0.4 1,-0.2 -3,-0.2 0.917 67.6 129.2 60.0 45.4 35.2 1.0 16.9 68 98 A Q - 0 0 105 -5,-0.4 -5,-1.0 2,-0.0 2,-0.3 -0.984 62.6-112.3-134.0 144.1 32.9 3.2 14.7 69 99 A T E +C 62 0C 108 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.559 40.0 177.7 -76.0 133.0 33.4 5.0 11.4 70 100 A K E -C 61 0C 53 -9,-1.3 -9,-3.0 -2,-0.3 5,-0.0 -0.982 25.5-117.6-138.1 148.8 33.4 8.8 11.6 71 101 A G E -C 60 0C 21 -2,-0.3 3,-0.3 -11,-0.3 -11,-0.2 -0.205 30.3-110.9 -76.4 172.7 33.9 11.6 9.1 72 102 A I S > S+ 0 0 49 -13,-1.0 3,-0.6 1,-0.2 -12,-0.1 0.595 110.1 74.5 -79.8 -11.2 36.7 14.1 9.2 73 103 A N T 3 S+ 0 0 139 1,-0.2 -1,-0.2 3,-0.0 -13,-0.0 0.927 104.0 34.9 -66.6 -45.2 34.2 16.8 10.2 74 104 A E T 3 S+ 0 0 113 -3,-0.3 14,-1.3 2,-0.1 2,-0.5 0.211 109.2 86.6 -93.0 14.6 33.8 15.5 13.7 75 105 A F S < S- 0 0 10 -3,-0.6 12,-0.1 12,-0.2 5,-0.1 -0.968 79.9-124.8-120.9 124.4 37.5 14.6 13.7 76 106 A S > - 0 0 47 -2,-0.5 4,-0.9 10,-0.3 10,-0.1 -0.210 20.8-121.1 -61.2 153.0 40.2 17.0 14.7 77 107 A K H >> S+ 0 0 183 1,-0.2 4,-1.3 2,-0.2 3,-0.7 0.912 114.8 50.0 -62.5 -43.3 43.0 17.6 12.2 78 108 A A H 3> S+ 0 0 66 1,-0.3 4,-2.1 2,-0.2 -1,-0.2 0.870 104.0 59.2 -63.5 -36.8 45.7 16.5 14.7 79 109 A Q H 34 S+ 0 0 26 1,-0.2 -1,-0.3 2,-0.2 -2,-0.2 0.766 105.0 51.5 -63.4 -24.2 43.6 13.4 15.4 80 110 A R H << S+ 0 0 132 -4,-0.9 -1,-0.2 -3,-0.7 -2,-0.2 0.818 106.7 52.7 -80.7 -34.0 44.0 12.5 11.7 81 111 A H H < S+ 0 0 165 -4,-1.3 -2,-0.2 -3,-0.2 -3,-0.1 0.926 93.8 83.9 -68.0 -45.8 47.8 13.0 11.7 82 112 A V S < S- 0 0 70 -4,-2.1 0, 0.0 1,-0.1 0, 0.0 -0.052 87.5-121.4 -54.5 160.8 48.4 10.6 14.7 83 113 A L S S+ 0 0 176 1,-0.3 -1,-0.1 2,-0.0 -4,-0.1 0.598 108.0 45.4 -81.9 -11.1 48.6 6.9 14.0 84 114 A D S S- 0 0 65 2,-0.0 -1,-0.3 -21,-0.0 -2,-0.1 -0.663 82.1-161.6-133.4 77.8 45.7 6.3 16.3 85 115 A P - 0 0 16 0, 0.0 -21,-0.8 0, 0.0 2,-0.4 -0.263 4.4-159.9 -59.8 143.0 42.9 8.8 15.6 86 116 A R - 0 0 71 -23,-0.1 -10,-0.3 -22,-0.1 5,-0.1 -0.991 23.9-107.5-132.0 128.2 40.2 9.3 18.4 87 117 A C > - 0 0 6 -2,-0.4 4,-2.5 1,-0.2 5,-0.3 -0.102 31.0-115.9 -48.5 145.7 36.8 10.8 17.9 88 118 A Q H > S+ 0 0 88 -14,-1.3 4,-0.6 1,-0.2 -1,-0.2 0.733 120.8 45.7 -58.4 -19.9 36.4 14.3 19.4 89 119 A I H 4 S+ 0 0 102 -15,-0.2 -1,-0.2 2,-0.2 5,-0.1 0.812 108.2 54.0 -90.2 -36.5 33.9 12.6 21.8 90 120 A C H >> S+ 0 0 20 1,-0.2 4,-2.0 2,-0.2 3,-1.2 0.870 105.4 54.6 -66.0 -37.3 36.0 9.6 22.6 91 121 A V H 3< S+ 0 0 33 -4,-2.5 4,-0.4 1,-0.3 5,-0.3 0.878 107.7 49.1 -64.2 -38.3 38.9 11.8 23.7 92 122 A H T 3< S+ 0 0 155 -4,-0.6 -1,-0.3 -5,-0.3 -2,-0.2 0.409 114.2 49.0 -81.5 3.2 36.7 13.7 26.1 93 123 A S T <4 S+ 0 0 79 -3,-1.2 -2,-0.2 -4,-0.1 -1,-0.2 0.669 111.2 44.4-110.3 -29.7 35.6 10.3 27.4 94 124 A Q S < S- 0 0 108 -4,-2.0 -2,-0.2 -5,-0.1 -3,-0.1 0.371 98.3-132.3 -96.0 3.0 38.9 8.6 27.9 95 125 A R 0 0 208 -4,-0.4 -3,-0.1 -5,-0.2 -4,-0.1 0.554 360.0 360.0 58.3 3.3 40.4 11.7 29.5 96 126 A N 0 0 167 -5,-0.3 -1,-0.1 -6,-0.3 -4,-0.1 -0.203 360.0 360.0 44.9 360.0 43.2 11.0 27.2