==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-AUG-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 30-JUN-12 2LVC . COMPND 2 MOLECULE: OBSCURIN-LIKE PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.PULAVARTI,A.ELETSKY,D.K.SUKUMARAN,D.LEE,E.KOHAN,H.JANJUA,R . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5776.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 72.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 28.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 24 26.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A H 0 0 203 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 124.7 -14.6 -18.4 -6.6 2 2 A M - 0 0 156 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.671 360.0-130.9 -80.9 139.0 -14.0 -16.6 -3.3 3 3 A P - 0 0 74 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.970 53.1 -70.4 -55.4 -86.0 -14.2 -12.6 -3.5 4 4 A V - 0 0 4 26,-0.0 2,-0.3 29,-0.0 78,-0.1 -0.842 37.9-174.2-177.0 139.6 -11.0 -11.2 -1.8 5 5 A H - 0 0 98 -2,-0.2 25,-0.7 -3,-0.1 2,-0.3 -0.893 29.7-128.0-142.0 113.4 -9.3 -10.7 1.7 6 6 A I - 0 0 2 -2,-0.3 23,-0.3 23,-0.2 77,-0.1 -0.410 17.2-166.7 -62.5 113.8 -6.0 -8.7 2.1 7 7 A V + 0 0 70 21,-0.5 3,-0.2 -2,-0.3 22,-0.2 0.755 62.4 72.6 -74.3 -25.3 -3.5 -10.9 4.0 8 8 A D B S+A 28 0A 78 20,-2.3 20,-1.7 1,-0.3 -1,-0.2 -0.989 89.4 22.3-151.3 134.4 -1.1 -8.0 4.8 9 9 A P - 0 0 21 0, 0.0 2,-0.6 0, 0.0 -1,-0.3 0.556 62.2-176.9 -87.7 150.4 -1.2 -5.6 6.6 10 10 A R + 0 0 157 -3,-0.2 2,-0.3 74,-0.1 -3,-0.0 -0.559 59.8 48.0-106.1 64.3 -3.7 -6.7 9.4 11 11 A E S S- 0 0 142 -2,-0.6 2,-0.6 74,-0.1 74,-0.4 -0.954 98.6 -69.9-175.3 171.0 -3.8 -3.4 11.5 12 12 A H - 0 0 159 -2,-0.3 2,-0.8 72,-0.1 74,-0.2 -0.732 53.4-141.4 -72.8 118.8 -4.2 0.4 11.4 13 13 A V E -d 86 0B 29 72,-2.1 74,-2.4 -2,-0.6 2,-0.7 -0.770 16.2-168.2 -96.3 102.4 -0.8 1.5 9.8 14 14 A F E -d 87 0B 144 -2,-0.8 2,-0.6 72,-0.2 74,-0.2 -0.816 6.3-169.7 -90.1 112.5 0.6 4.7 11.4 15 15 A V E -d 88 0B 27 72,-2.4 74,-2.5 -2,-0.7 2,-0.6 -0.924 10.4-156.0-102.9 118.2 3.5 6.1 9.2 16 16 A H E +d 89 0B 131 -2,-0.6 2,-0.3 72,-0.2 74,-0.2 -0.878 27.8 173.8 -86.6 122.9 5.6 9.0 10.7 17 17 A A - 0 0 1 72,-2.7 2,-0.3 -2,-0.6 51,-0.0 -0.873 22.0-161.1-130.6 158.5 7.2 10.9 7.7 18 18 A I > - 0 0 70 -2,-0.3 3,-1.8 1,-0.0 49,-0.4 -0.899 39.0-104.2-131.7 162.8 9.3 14.0 7.0 19 19 A T T 3 S+ 0 0 76 -2,-0.3 71,-0.0 1,-0.3 -1,-0.0 0.813 123.3 47.5 -56.1 -35.0 9.8 16.1 3.7 20 20 A S T 3 S+ 0 0 107 46,-0.1 -1,-0.3 2,-0.0 2,-0.2 0.093 99.4 95.8 -96.3 20.7 13.4 14.5 3.3 21 21 A E < - 0 0 106 -3,-1.8 46,-2.5 46,-0.3 2,-0.5 -0.725 69.3-132.5-107.6 160.7 12.0 10.9 3.9 22 22 A C - 0 0 92 -2,-0.2 2,-0.8 44,-0.2 44,-0.1 -0.947 16.0-160.9-115.7 109.9 11.0 8.2 1.5 23 23 A V E - B 0 64A 17 41,-1.4 41,-1.7 -2,-0.5 2,-0.7 -0.826 9.5-178.6 -96.2 107.9 7.6 6.5 2.3 24 24 A M E - B 0 63A 109 -2,-0.8 39,-0.2 39,-0.2 2,-0.1 -0.882 12.0-163.4-107.7 95.1 7.3 3.1 0.5 25 25 A L E - B 0 62A 8 37,-2.4 37,-2.0 -2,-0.7 2,-0.3 -0.458 4.1-165.0 -77.1 152.3 3.9 1.6 1.4 26 26 A A E + B 0 61A 44 35,-0.2 2,-0.3 -2,-0.1 35,-0.2 -0.997 14.0 175.4-145.9 136.7 3.1 -2.1 0.8 27 27 A C E - B 0 60A 2 33,-2.6 33,-1.5 -2,-0.3 2,-0.4 -0.949 9.8-165.8-144.9 117.3 -0.2 -4.2 0.7 28 28 A E E -AB 8 59A 67 -20,-1.7 -20,-2.3 -2,-0.3 -21,-0.5 -0.908 8.4-155.1-108.7 129.8 -0.3 -8.0 -0.1 29 29 A V - 0 0 3 29,-1.8 -23,-0.2 -2,-0.4 3,-0.1 -0.508 24.5-119.9 -95.5 168.3 -3.7 -9.8 -1.0 30 30 A D S S+ 0 0 66 -25,-0.7 2,-0.5 -2,-0.2 -24,-0.1 0.868 97.2 49.6 -70.7 -41.2 -4.6 -13.5 -0.7 31 31 A R > - 0 0 49 3,-0.2 3,-1.2 1,-0.1 -1,-0.1 -0.902 64.0-151.4-113.3 128.6 -5.4 -13.9 -4.5 32 32 A E T 3 S+ 0 0 124 -2,-0.5 -1,-0.1 1,-0.2 25,-0.1 0.756 98.9 69.2 -60.3 -25.1 -3.1 -12.9 -7.4 33 33 A D T 3 S+ 0 0 101 1,-0.2 -1,-0.2 -3,-0.0 -29,-0.0 0.801 99.2 47.2 -60.5 -37.0 -6.5 -12.5 -9.3 34 34 A A S < S- 0 0 16 -3,-1.2 -3,-0.2 -31,-0.0 -1,-0.2 -0.772 72.2-175.4-121.1 82.7 -7.6 -9.4 -7.2 35 35 A P - 0 0 52 0, 0.0 2,-0.1 0, 0.0 24,-0.1 -0.511 26.7-116.0 -74.1 144.8 -4.8 -6.6 -6.8 36 36 A V - 0 0 0 -9,-0.2 2,-0.4 22,-0.2 43,-0.2 -0.462 17.0-137.7 -76.8 151.5 -5.5 -3.5 -4.6 37 37 A R E -E 78 0B 139 41,-1.9 41,-2.3 -2,-0.1 2,-0.3 -0.936 19.6-128.2-104.8 136.0 -5.7 0.1 -5.9 38 38 A W E -E 77 0B 7 -2,-0.4 7,-2.3 39,-0.2 2,-0.4 -0.678 21.5-157.3 -85.5 132.4 -4.0 2.8 -3.8 39 39 A Y E -E 76 0B 33 37,-0.7 37,-1.5 -2,-0.3 2,-1.1 -0.965 12.8-147.1-115.7 127.5 -6.2 5.9 -2.9 40 40 A K E > S-E 75 0B 41 -2,-0.4 3,-1.8 1,-0.2 35,-0.2 -0.767 86.9 -41.1 -90.5 91.2 -4.8 9.4 -2.0 41 41 A D T 3 S- 0 0 91 33,-1.8 -1,-0.2 -2,-1.1 34,-0.1 0.844 119.0 -48.8 51.8 40.7 -7.5 10.5 0.5 42 42 A G T 3 S+ 0 0 53 32,-0.2 -1,-0.3 34,-0.1 33,-0.1 0.064 125.6 100.2 91.6 -23.1 -10.2 9.0 -1.8 43 43 A Q S < S- 0 0 160 -3,-1.8 -2,-0.1 -4,-0.0 -4,-0.1 0.748 87.9-124.5 -62.0 -26.7 -8.8 10.8 -5.0 44 44 A E - 0 0 78 -7,-0.1 -5,-0.3 32,-0.0 2,-0.3 0.650 23.8 -94.7 72.4 124.8 -7.0 7.4 -6.0 45 45 A V - 0 0 13 -7,-2.3 2,-0.3 1,-0.0 -7,-0.2 -0.508 42.8-159.6 -72.0 125.0 -3.2 7.5 -6.6 46 46 A E - 0 0 159 -2,-0.3 2,-0.4 -6,-0.0 5,-0.1 -0.809 28.9 -94.7-110.1 149.2 -2.3 8.0 -10.4 47 47 A E + 0 0 146 -2,-0.3 2,-0.2 5,-0.1 5,-0.2 -0.480 59.4 159.4 -68.3 116.6 1.1 7.2 -12.1 48 48 A S - 0 0 59 3,-2.7 5,-0.1 -2,-0.4 -1,-0.0 -0.692 55.3 -91.8-131.2 179.1 3.3 10.3 -12.1 49 49 A D S S+ 0 0 156 -2,-0.2 3,-0.1 1,-0.2 -2,-0.0 0.858 127.1 18.1 -63.9 -40.5 7.0 11.4 -12.5 50 50 A F S S+ 0 0 95 1,-0.1 2,-0.7 14,-0.0 16,-0.2 0.473 117.1 74.0-110.9 -10.9 7.6 11.3 -8.6 51 51 A V + 0 0 19 13,-0.1 -3,-2.7 -5,-0.1 2,-0.4 -0.905 65.6 177.0-107.1 103.4 4.6 9.1 -7.7 52 52 A V E -C 63 0A 55 11,-1.7 11,-2.4 -2,-0.7 2,-0.7 -0.925 21.3-153.5-118.0 131.1 5.4 5.5 -8.8 53 53 A L E -C 62 0A 34 -2,-0.4 2,-0.5 9,-0.2 9,-0.2 -0.886 12.7-162.6-105.1 107.2 3.2 2.4 -8.2 54 54 A E E +C 61 0A 105 7,-0.7 7,-2.2 -2,-0.7 2,-0.3 -0.788 13.9 178.4 -96.9 123.5 5.2 -0.9 -8.1 55 55 A N E +C 60 0A 103 -2,-0.5 5,-0.2 5,-0.2 2,-0.2 -0.976 18.0 166.9-135.5 140.0 3.2 -4.2 -8.6 56 56 A E E > -C 59 0A 104 3,-2.4 3,-1.8 -2,-0.3 -2,-0.0 -0.725 63.7 -67.3-155.6 91.3 4.1 -7.9 -8.7 57 57 A G T 3 S- 0 0 30 1,-0.3 -1,-0.2 -2,-0.2 -26,-0.1 -0.400 121.9 -1.2 61.9-121.6 1.3 -10.5 -8.5 58 58 A P T 3 S+ 0 0 37 0, 0.0 -29,-1.8 0, 0.0 2,-0.4 0.737 119.4 90.2 -67.8 -22.2 -0.3 -10.4 -4.9 59 59 A H E < -BC 28 56A 65 -3,-1.8 -3,-2.4 -31,-0.2 2,-0.4 -0.636 55.0-178.0 -85.3 127.4 2.2 -7.7 -3.8 60 60 A R E -BC 27 55A 48 -33,-1.5 -33,-2.6 -2,-0.4 2,-0.3 -0.994 5.7-173.1-127.3 131.6 1.2 -4.0 -4.4 61 61 A R E -BC 26 54A 68 -7,-2.2 -7,-0.7 -2,-0.4 2,-0.4 -0.931 21.3-159.2-130.7 148.6 3.5 -1.0 -3.5 62 62 A L E -BC 25 53A 3 -37,-2.0 -37,-2.4 -2,-0.3 2,-0.6 -0.938 18.1-167.4-125.3 103.2 3.3 2.9 -3.4 63 63 A V E +BC 24 52A 34 -11,-2.4 -11,-1.7 -2,-0.4 -39,-0.2 -0.849 10.8 177.0 -98.1 118.7 6.9 4.4 -3.6 64 64 A L E -B 23 0A 5 -41,-1.7 -41,-1.4 -2,-0.6 3,-0.3 -0.918 6.8-172.7-119.0 99.1 7.2 8.2 -2.7 65 65 A P S S+ 0 0 76 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 0.918 84.3 29.0 -59.5 -49.1 11.0 9.3 -2.8 66 66 A A S S- 0 0 56 -16,-0.2 2,-1.1 -44,-0.1 -44,-0.2 -0.867 84.6-151.3-115.7 92.3 10.4 12.8 -1.4 67 67 A T - 0 0 2 -46,-2.5 -46,-0.3 -2,-0.6 -45,-0.0 -0.528 19.6-160.2 -72.7 97.1 7.4 12.6 0.9 68 68 A Q > - 0 0 70 -2,-1.1 3,-0.7 1,-0.1 4,-0.1 -0.212 33.7-112.2 -71.9 161.8 5.9 16.2 0.7 69 69 A P G > S+ 0 0 94 0, 0.0 3,-0.8 0, 0.0 21,-0.1 0.743 122.7 65.5 -61.6 -21.8 3.4 17.8 3.2 70 70 A S G 3 S+ 0 0 84 1,-0.2 -3,-0.1 3,-0.0 0, 0.0 0.856 99.1 49.4 -61.5 -38.2 1.1 17.5 0.1 71 71 A D G < S+ 0 0 16 -3,-0.7 2,-1.8 1,-0.1 -1,-0.2 0.356 81.5 114.0 -84.8 6.0 1.4 13.6 0.5 72 72 A G < + 0 0 35 -3,-0.8 2,-0.2 -4,-0.1 -1,-0.1 -0.475 55.5 84.0 -84.3 72.0 0.5 13.9 4.3 73 73 A G S S- 0 0 10 -2,-1.8 15,-2.3 13,-0.1 2,-0.5 -0.695 84.7 -61.3-146.6-162.5 -2.9 12.1 4.4 74 74 A E E - F 0 87B 109 13,-0.2 -33,-1.8 -2,-0.2 2,-0.5 -0.869 38.6-155.3-103.0 121.0 -4.6 8.6 4.6 75 75 A F E -EF 40 86B 9 11,-2.5 11,-2.2 -2,-0.5 2,-0.6 -0.843 6.8-161.4 -96.4 123.0 -3.9 6.1 1.8 76 76 A Q E -EF 39 85B 71 -37,-1.5 2,-1.0 -2,-0.5 -37,-0.7 -0.917 5.8-155.9-112.4 109.4 -6.7 3.4 1.3 77 77 A C E -EF 38 84B 0 7,-2.1 7,-1.3 -2,-0.6 2,-0.7 -0.747 16.6-160.8 -88.8 98.4 -5.7 0.2 -0.6 78 78 A V E +EF 37 83B 27 -41,-2.3 -41,-1.9 -2,-1.0 5,-0.2 -0.730 25.7 168.8 -89.1 111.3 -9.0 -1.1 -2.0 79 79 A A - 0 0 20 3,-2.2 -1,-0.2 -2,-0.7 4,-0.2 0.861 61.4-101.0 -77.7 -43.9 -9.2 -4.8 -3.0 80 80 A G S S+ 0 0 53 2,-1.0 3,-0.1 -76,-0.1 -75,-0.0 -0.447 108.7 28.2 157.2 -73.7 -13.0 -4.7 -3.4 81 81 A D S S+ 0 0 116 -77,-0.1 2,-0.3 1,-0.1 -76,-0.1 0.856 128.0 37.8 -74.2 -41.2 -14.7 -6.3 -0.3 82 82 A E - 0 0 45 -78,-0.1 -3,-2.2 2,-0.0 -2,-1.0 -0.851 63.8-173.3-122.6 149.3 -11.8 -5.4 2.0 83 83 A C E - F 0 78B 31 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.999 15.2-142.9-144.1 134.9 -9.4 -2.3 2.4 84 84 A A E - F 0 77B 9 -7,-1.3 -7,-2.1 -2,-0.3 2,-0.4 -0.792 20.4-138.5 -98.6 146.4 -6.3 -1.6 4.5 85 85 A Y E - F 0 76B 129 -74,-0.4 -72,-2.1 -2,-0.3 2,-0.5 -0.902 14.4-170.0-115.8 128.0 -5.7 2.0 5.9 86 86 A F E -dF 13 75B 5 -11,-2.2 -11,-2.5 -2,-0.4 2,-0.9 -0.945 6.5-161.1-120.9 108.9 -2.3 3.9 6.1 87 87 A T E -dF 14 74B 46 -74,-2.4 -72,-2.4 -2,-0.5 2,-0.5 -0.787 10.5-167.3 -93.4 101.7 -2.2 7.2 8.1 88 88 A V E -d 15 0B 4 -15,-2.3 2,-0.5 -2,-0.9 -72,-0.2 -0.806 2.9-170.4 -94.2 123.9 0.9 9.2 6.9 89 89 A T E d 16 0B 47 -74,-2.5 -72,-2.7 -2,-0.5 -16,-0.1 -0.957 360.0 360.0-122.2 115.0 1.8 12.2 9.2 90 90 A I 0 0 67 -2,-0.5 -71,-0.2 -74,-0.2 -1,-0.1 0.860 360.0 360.0 -84.4 360.0 4.5 14.8 8.1