==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 09-JUL-12 2LVN . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE AMFR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.LIU,Y.CHEN,T.HUANG,S.G.TARASOV,A.KING,J.LI,A.M.WEISSMAN,R. . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3872.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 453 C S 0 0 161 0, 0.0 3,-0.3 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 24.4 -8.6 2.8 4.1 2 454 C N > + 0 0 77 1,-0.2 4,-2.5 2,-0.1 3,-0.2 -0.016 360.0 125.9-110.7 29.6 -10.7 -0.3 4.8 3 455 C S H > S+ 0 0 85 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.857 73.5 53.2 -56.2 -38.3 -8.3 -1.7 7.5 4 456 C Q H > S+ 0 0 147 -3,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.910 109.9 47.0 -64.5 -42.2 -11.3 -1.9 9.9 5 457 C L H > S+ 0 0 19 -3,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.893 112.7 49.8 -67.1 -39.8 -13.3 -3.9 7.5 6 458 C N H X S+ 0 0 68 -4,-2.5 4,-0.7 1,-0.2 -2,-0.2 0.912 112.1 47.9 -64.0 -43.5 -10.4 -6.2 6.7 7 459 C A H >X S+ 0 0 46 -4,-2.5 4,-0.9 -5,-0.2 3,-0.8 0.883 108.4 54.4 -65.8 -40.5 -9.8 -6.7 10.4 8 460 C M H >X S+ 0 0 44 -4,-2.4 4,-1.2 1,-0.3 3,-0.8 0.908 103.6 55.1 -60.8 -42.4 -13.5 -7.4 11.1 9 461 C A H 3X S+ 0 0 0 -4,-1.9 4,-2.4 1,-0.2 -1,-0.3 0.725 96.1 69.6 -63.6 -20.4 -13.5 -10.2 8.5 10 462 C H H < + 0 0 50 -4,-3.7 3,-1.3 -5,-0.2 -1,-0.3 -0.719 62.6 165.1-125.5 79.6 -16.0 -19.6 9.9 17 469 C P T 3 + 0 0 94 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.510 69.4 78.9 -70.9 -4.2 -12.8 -20.8 8.1 18 470 C Q T 3 S+ 0 0 122 -3,-0.1 -5,-0.1 2,-0.1 -2,-0.0 0.725 84.1 72.0 -75.6 -22.6 -15.1 -22.4 5.5 19 471 C V S < S- 0 0 4 -3,-1.3 2,-0.4 -7,-0.2 29,-0.1 -0.604 92.7 -97.9 -99.2 157.1 -15.8 -19.2 3.7 20 472 C P > - 0 0 37 0, 0.0 4,-1.5 0, 0.0 3,-0.3 -0.582 23.7-142.1 -75.4 126.4 -13.5 -17.0 1.5 21 473 C Y H > S+ 0 0 76 -2,-0.4 4,-2.2 1,-0.2 3,-0.2 0.877 99.7 49.5 -53.6 -45.7 -11.8 -14.1 3.4 22 474 C H H > S+ 0 0 146 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.838 107.8 52.5 -69.4 -34.5 -12.2 -11.7 0.4 23 475 C L H > S+ 0 0 53 -3,-0.3 4,-1.3 2,-0.2 -1,-0.2 0.788 109.4 51.3 -71.9 -24.9 -15.8 -12.5 -0.2 24 476 C V H X S+ 0 0 0 -4,-1.5 4,-2.0 2,-0.2 -2,-0.2 0.913 104.0 57.0 -73.1 -43.2 -16.4 -11.7 3.5 25 477 C L H < S+ 0 0 26 -4,-2.2 4,-0.4 1,-0.2 -2,-0.2 0.847 104.0 55.2 -52.4 -38.4 -14.5 -8.4 3.0 26 478 C Q H >X S+ 0 0 118 -4,-1.4 3,-1.5 1,-0.2 4,-1.4 0.924 105.8 48.9 -63.7 -45.7 -17.1 -7.6 0.3 27 479 C D H 3X>S+ 0 0 6 -4,-1.3 4,-3.8 1,-0.3 5,-0.9 0.834 102.8 62.5 -65.6 -30.9 -20.0 -8.1 2.7 28 480 C L H 3<5S+ 0 0 0 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.661 103.8 49.3 -68.1 -15.6 -18.3 -5.9 5.2 29 481 C Q H <45S+ 0 0 86 -3,-1.5 -1,-0.2 -4,-0.4 -2,-0.2 0.789 114.8 45.9 -83.2 -35.6 -18.6 -3.2 2.6 30 482 C L H <5S+ 0 0 127 -4,-1.4 -2,-0.2 -5,-0.1 -3,-0.2 0.949 138.0 3.8 -70.2 -54.7 -22.3 -4.2 2.3 31 483 C T T <5S- 0 0 42 -4,-3.8 -3,-0.2 -5,-0.1 -2,-0.1 0.747 73.9-150.3-107.2 -31.5 -23.2 -4.4 5.9 32 484 C R < + 0 0 173 -5,-0.9 2,-0.4 1,-0.1 -4,-0.2 0.722 68.4 106.4 60.8 22.8 -20.1 -3.3 7.8 33 485 C S >> - 0 0 39 -6,-0.3 4,-3.3 1,-0.1 3,-0.8 -0.936 58.2-162.3-137.0 111.0 -21.4 -5.6 10.5 34 486 C V H 3> S+ 0 0 25 -2,-0.4 4,-2.4 1,-0.3 5,-0.2 0.798 95.5 61.8 -61.8 -27.0 -19.7 -9.0 11.2 35 487 C E H 3> S+ 0 0 148 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.876 113.1 34.9 -65.5 -37.5 -22.9 -9.9 13.1 36 488 C I H <> S+ 0 0 80 -3,-0.8 4,-3.6 2,-0.2 -2,-0.2 0.938 114.2 57.1 -79.7 -51.0 -24.9 -9.5 9.9 37 489 C T H X S+ 0 0 0 -4,-3.3 4,-2.5 1,-0.2 -2,-0.2 0.846 107.2 50.2 -45.9 -42.9 -22.1 -10.8 7.6 38 490 C T H X S+ 0 0 20 -4,-2.4 4,-1.6 2,-0.2 -1,-0.2 0.932 115.6 40.6 -65.9 -44.7 -22.0 -14.0 9.5 39 491 C D H X S+ 0 0 90 -4,-1.1 4,-1.4 2,-0.2 -2,-0.2 0.844 111.8 59.5 -70.4 -32.3 -25.8 -14.5 9.3 40 492 C N H X>S+ 0 0 9 -4,-3.6 5,-2.6 2,-0.2 4,-1.0 0.918 102.2 52.1 -58.6 -47.4 -25.4 -13.2 5.7 41 493 C I H ><5S+ 0 0 15 -4,-2.5 3,-0.9 1,-0.2 -1,-0.2 0.924 109.5 50.0 -52.6 -47.0 -23.1 -16.2 5.0 42 494 C L H 3<5S+ 0 0 109 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.736 105.7 55.9 -68.4 -25.3 -25.8 -18.5 6.4 43 495 C E H 3<5S- 0 0 115 -4,-1.4 -1,-0.3 -3,-0.4 -2,-0.2 0.673 121.8-106.8 -78.6 -17.0 -28.4 -16.9 4.2 44 496 C G T <<5S+ 0 0 28 -4,-1.0 -3,-0.2 -3,-0.9 -2,-0.1 0.508 85.4 128.6 98.6 9.0 -26.3 -17.7 1.2 45 497 C R S