==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 03-JUN-02 1LWR . COMPND 2 MOLECULE: NEURAL CELL ADHESION MOLECULE 1, 140 KDA ISOFORM; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR V.V.KISELYOV,G.SKLADCHIKOVA,A.M.HINSBY,P.H.JENSEN,N.KULAHIN, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5882.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 62.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 39 40.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 141 0, 0.0 82,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 170.5 4.1 17.2 12.0 2 2 A G - 0 0 40 80,-0.1 82,-0.1 82,-0.1 80,-0.1 -0.609 360.0 -22.6 113.8-176.3 3.3 16.9 8.2 3 3 A P - 0 0 7 0, 0.0 82,-0.4 0, 0.0 25,-0.2 0.091 67.8-100.9 -56.5 173.7 0.5 15.5 6.1 4 4 A S - 0 0 54 23,-2.6 22,-0.2 80,-0.1 23,-0.2 -0.653 49.4 -83.9 -95.2 159.5 -2.1 12.9 7.3 5 5 A A - 0 0 31 -2,-0.2 81,-0.1 81,-0.1 80,-0.1 -0.333 53.3-106.2 -64.9 144.4 -1.8 9.2 6.3 6 6 A P - 0 0 9 0, 0.0 2,-0.5 0, 0.0 19,-0.2 -0.135 26.2-115.8 -66.0 163.6 -3.2 8.4 2.9 7 7 A K E -A 24 0A 104 17,-2.6 17,-3.1 80,-0.1 2,-0.7 -0.909 27.3-145.7-102.3 128.1 -6.5 6.6 2.5 8 8 A L E -A 23 0A 19 -2,-0.5 2,-0.4 15,-0.2 15,-0.2 -0.838 11.3-165.6-102.9 115.7 -6.0 3.2 0.8 9 9 A E E -A 22 0A 89 13,-2.7 13,-2.8 -2,-0.7 2,-0.5 -0.796 16.9-134.6 -97.4 141.7 -8.8 2.0 -1.5 10 10 A G E +A 21 0A 30 -2,-0.4 2,-0.5 11,-0.2 11,-0.2 -0.823 23.4 177.2-106.9 125.7 -8.7 -1.6 -2.6 11 11 A Q E -A 20 0A 116 9,-2.4 9,-2.7 -2,-0.5 2,-0.5 -0.983 12.6-163.3-121.3 119.7 -9.3 -3.0 -6.1 12 12 A M E -A 19 0A 83 -2,-0.5 2,-0.2 7,-0.2 7,-0.2 -0.884 14.3-133.6-105.9 132.2 -8.9 -6.7 -6.5 13 13 A G E > > -A 18 0A 26 5,-3.1 3,-2.3 -2,-0.5 5,-0.5 -0.572 22.4-115.3 -85.3 147.5 -8.4 -8.2 -10.0 14 14 A E T 3 5S+ 0 0 205 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 0.355 102.5 89.4 -65.1 13.2 -10.4 -11.2 -11.1 15 15 A D T 3 5S- 0 0 102 3,-0.2 -1,-0.3 1,-0.1 -3,-0.0 0.723 98.3-125.7 -79.9 -22.8 -7.1 -13.1 -11.2 16 16 A G T < 5S+ 0 0 7 -3,-2.3 78,-2.8 2,-0.2 52,-0.1 -0.138 98.1 38.3 107.0 -40.7 -7.6 -14.1 -7.6 17 17 A N T 5S+ 0 0 17 76,-0.2 47,-2.2 50,-0.1 48,-1.0 -0.294 82.5 112.7-137.7 49.1 -4.3 -12.8 -6.3 18 18 A S E < -AB 13 63A 14 -5,-0.5 -5,-3.1 45,-0.2 2,-0.5 -0.963 45.4-173.5-121.1 113.0 -3.8 -9.5 -8.2 19 19 A I E -AB 12 62A 4 43,-2.7 43,-2.4 -2,-0.5 2,-0.5 -0.911 15.0-170.8-117.9 127.9 -4.1 -6.5 -5.9 20 20 A K E -AB 11 61A 82 -9,-2.7 -9,-2.4 -2,-0.5 2,-0.6 -0.970 8.9-160.3-114.2 127.3 -4.1 -2.8 -6.7 21 21 A V E -AB 10 60A 0 39,-3.1 39,-2.6 -2,-0.5 2,-0.5 -0.919 8.7-155.2-107.8 113.2 -3.9 -0.4 -3.8 22 22 A N E -AB 9 59A 34 -13,-2.8 -13,-2.7 -2,-0.6 2,-0.8 -0.775 7.4-142.9 -95.8 131.9 -5.1 3.1 -4.7 23 23 A L E -A 8 0A 6 35,-2.5 2,-0.4 -2,-0.5 -15,-0.2 -0.781 15.0-166.6-101.3 107.1 -3.7 6.0 -2.7 24 24 A I E -A 7 0A 57 -17,-3.1 -17,-2.6 -2,-0.8 2,-0.2 -0.782 9.3-147.9 -93.6 132.6 -6.2 8.7 -2.0 25 25 A K + 0 0 86 -2,-0.4 -20,-0.1 -19,-0.2 3,-0.1 -0.652 29.1 155.4 -99.1 155.3 -4.9 12.0 -0.7 26 26 A Q + 0 0 96 -2,-0.2 2,-0.4 -22,-0.2 -1,-0.1 0.514 64.4 18.1-144.0 -48.2 -6.8 14.3 1.7 27 27 A D + 0 0 88 -23,-0.2 -23,-2.6 -22,-0.1 -1,-0.1 -0.886 62.4 121.6-143.9 109.1 -4.6 16.6 3.8 28 28 A D S S- 0 0 24 -2,-0.4 -1,-0.1 -25,-0.2 -26,-0.0 0.548 78.3 -97.1-130.8 -37.6 -1.0 17.5 3.1 29 29 A G S S- 0 0 61 -27,-0.0 -2,-0.1 -26,-0.0 0, 0.0 0.730 100.8 -15.6 114.8 54.7 -0.9 21.3 2.8 30 30 A G S S- 0 0 80 1,-0.1 3,-0.0 2,-0.0 -3,-0.0 0.662 113.7 -81.7 92.0 21.4 -1.0 22.1 -0.9 31 31 A S + 0 0 64 1,-0.2 -1,-0.1 -5,-0.0 -6,-0.0 0.933 69.2 164.3 43.6 61.3 -0.1 18.4 -1.7 32 32 A P + 0 0 28 0, 0.0 48,-2.6 0, 0.0 49,-0.2 -0.180 28.8 150.1 -88.8 40.0 3.7 18.8 -1.2 33 33 A I E -C 79 0B 20 46,-0.2 2,-0.5 47,-0.1 46,-0.3 -0.425 35.4-157.0 -82.2 150.2 3.7 15.0 -1.0 34 34 A R E -C 78 0B 105 44,-3.4 44,-1.7 1,-0.3 21,-0.2 -0.984 44.1 -65.3-130.9 116.7 6.6 12.8 -2.1 35 35 A H E - 0 0 22 -2,-0.5 43,-1.3 19,-0.2 2,-0.3 0.438 58.5 -98.0 35.7-172.9 6.2 9.2 -3.1 36 36 A Y E -C 77 0B 5 41,-0.2 17,-2.6 18,-0.2 2,-0.7 -0.993 10.8-137.0-139.2 151.3 5.1 6.4 -0.8 37 37 A L E -CD 76 52B 22 39,-2.7 39,-2.7 -2,-0.3 2,-0.5 -0.931 30.0-171.4-106.9 109.8 6.8 3.7 1.2 38 38 A V E +CD 75 51B 7 13,-2.7 13,-2.5 -2,-0.7 2,-0.4 -0.926 13.0 165.3-113.9 122.9 4.8 0.5 0.7 39 39 A K E +C 74 0B 73 35,-2.4 35,-3.0 -2,-0.5 2,-0.3 -0.996 9.2 175.9-131.7 135.4 5.4 -2.7 2.7 40 40 A Y E -C 73 0B 35 -2,-0.4 8,-2.8 8,-0.3 2,-0.3 -0.954 9.7-172.6-141.5 161.6 3.1 -5.7 2.9 41 41 A R E -C 72 0B 62 31,-2.5 31,-2.8 -2,-0.3 5,-0.2 -0.940 12.9-136.9-144.3 170.1 2.9 -9.1 4.4 42 42 A A E -C 71 0B 3 3,-2.4 2,-0.6 -2,-0.3 29,-0.2 -0.550 40.3 -88.8-122.6 179.7 0.6 -12.2 4.3 43 43 A L S S+ 0 0 121 27,-1.5 3,-0.1 -2,-0.2 28,-0.1 -0.179 125.2 39.1 -82.4 42.7 -0.8 -14.7 6.7 44 44 A A S S+ 0 0 75 -2,-0.6 2,-0.3 1,-0.5 -1,-0.1 0.315 121.3 20.1-150.6 -56.8 2.3 -16.8 6.1 45 45 A S S S- 0 0 72 0, 0.0 -3,-2.4 0, 0.0 -1,-0.5 -0.932 73.2-130.4-124.3 152.0 5.4 -14.6 5.8 46 46 A E + 0 0 117 -2,-0.3 -5,-0.1 -5,-0.2 -6,-0.1 -0.402 68.0 1.9 -98.1 175.0 5.9 -11.1 7.0 47 47 A W S S- 0 0 101 -2,-0.1 -6,-0.2 -8,-0.1 -1,-0.2 0.666 70.3-155.6 10.5 95.8 7.3 -7.9 5.4 48 48 A K - 0 0 95 -8,-2.8 -8,-0.3 -3,-0.2 2,-0.2 -0.436 48.6 -59.0 -80.5 163.0 8.0 -8.9 1.8 49 49 A P S S- 0 0 121 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.217 71.9-142.0 -44.9 102.3 10.6 -6.9 -0.2 50 50 A E - 0 0 92 -2,-0.2 2,-0.3 -3,-0.1 -11,-0.2 -0.012 11.1-140.4 -69.4 175.1 9.0 -3.5 0.1 51 51 A I E -D 38 0B 91 -13,-2.5 -13,-2.7 0, 0.0 2,-0.5 -0.966 4.7-139.7-137.5 153.1 8.8 -0.8 -2.7 52 52 A R E -D 37 0B 144 -2,-0.3 -15,-0.2 -15,-0.2 -17,-0.1 -0.965 25.1-134.9-114.4 127.5 9.1 3.0 -3.0 53 53 A L - 0 0 16 -17,-2.6 7,-0.1 -2,-0.5 -17,-0.0 -0.222 31.1 -88.5 -73.3 164.8 6.7 4.7 -5.3 54 54 A P > - 0 0 86 0, 0.0 2,-2.3 0, 0.0 3,-0.6 -0.135 60.2 -77.6 -61.8 170.0 7.8 7.5 -7.8 55 55 A S T 3 S+ 0 0 97 1,-0.3 -21,-0.0 -21,-0.2 -22,-0.0 -0.455 121.5 5.2 -76.9 77.6 7.7 11.1 -6.6 56 56 A G T 3 S+ 0 0 56 -2,-2.3 -1,-0.3 -20,-0.0 2,-0.1 0.754 86.9 166.2 113.1 64.7 4.0 11.6 -6.9 57 57 A S < - 0 0 36 -3,-0.6 3,-0.1 1,-0.1 -4,-0.0 -0.290 34.9-143.4 -97.0-174.5 2.2 8.3 -7.8 58 58 A D S S- 0 0 82 1,-0.4 -35,-2.5 -2,-0.1 2,-0.3 0.563 74.1 -0.6-122.1 -25.3 -1.4 7.3 -7.7 59 59 A H E -B 22 0A 47 -37,-0.2 -1,-0.4 -51,-0.0 2,-0.3 -0.983 51.7-137.5-160.2 167.7 -1.2 3.7 -6.6 60 60 A V E -B 21 0A 6 -39,-2.6 -39,-3.1 -2,-0.3 2,-0.3 -0.939 24.3-160.3-129.6 153.7 0.9 0.7 -5.7 61 61 A M E -B 20 0A 105 -2,-0.3 2,-0.3 -41,-0.2 -41,-0.2 -0.958 14.8-168.8-139.8 154.5 0.4 -2.9 -6.8 62 62 A L E -B 19 0A 16 -43,-2.4 -43,-2.7 -2,-0.3 2,-0.4 -0.997 13.1-169.2-140.4 139.8 1.3 -6.5 -5.9 63 63 A K E +B 18 0A 112 -2,-0.3 -45,-0.2 -45,-0.2 -2,-0.0 -0.985 56.6 24.8-135.8 136.5 0.7 -9.6 -8.1 64 64 A S S S+ 0 0 98 -47,-2.2 -1,-0.2 -2,-0.4 -46,-0.1 0.931 72.8 159.8 87.0 51.6 0.9 -13.4 -7.6 65 65 A L - 0 0 14 -48,-1.0 2,-0.2 -3,-0.2 -1,-0.1 -0.354 48.4 -64.4 -98.0-177.9 0.3 -13.8 -3.9 66 66 A D > - 0 0 85 -2,-0.1 3,-0.6 4,-0.1 27,-0.2 -0.410 51.9-122.0 -74.3 134.7 -0.8 -16.8 -1.9 67 67 A W T 3 S+ 0 0 78 1,-0.2 28,-0.2 -2,-0.2 3,-0.1 -0.365 92.3 14.4 -73.2 155.3 -4.3 -18.1 -2.6 68 68 A N T 3 S+ 0 0 115 26,-3.2 2,-0.3 1,-0.2 -1,-0.2 0.912 103.2 126.7 44.1 49.1 -6.8 -18.3 0.3 69 69 A A < - 0 0 13 -3,-0.6 24,-2.7 25,-0.3 2,-0.3 -0.950 59.4-123.8-131.2 153.8 -4.5 -16.1 2.4 70 70 A E E - E 0 92B 82 -2,-0.3 -27,-1.5 22,-0.2 2,-0.4 -0.700 27.1-157.6 -95.1 150.3 -5.0 -12.8 4.2 71 71 A Y E -CE 42 91B 1 20,-3.1 20,-2.2 -2,-0.3 2,-0.5 -0.990 12.9-160.5-134.2 143.4 -2.9 -9.8 3.4 72 72 A E E -CE 41 90B 21 -31,-2.8 -31,-2.5 -2,-0.4 2,-0.5 -0.978 9.6-171.4-118.7 123.1 -1.8 -6.6 5.3 73 73 A V E -CE 40 89B 0 16,-3.0 16,-3.1 -2,-0.5 2,-0.5 -0.973 2.5-167.6-116.5 121.8 -0.5 -3.6 3.2 74 74 A Y E -CE 39 88B 93 -35,-3.0 -35,-2.4 -2,-0.5 2,-0.5 -0.937 5.2-170.0-110.4 125.4 1.0 -0.7 5.1 75 75 A V E -CE 38 87B 0 12,-2.7 12,-2.8 -2,-0.5 2,-0.3 -0.963 4.8-176.8-120.8 122.1 1.6 2.5 3.2 76 76 A V E -C 37 0B 31 -39,-2.7 -39,-2.7 -2,-0.5 2,-0.3 -0.800 11.8-150.8-107.1 158.0 3.5 5.5 4.5 77 77 A A E -CE 36 84B 2 7,-2.1 7,-3.1 8,-0.4 2,-0.3 -0.913 2.6-143.5-127.5 155.5 4.0 8.8 2.6 78 78 A E E -CE 34 83B 67 -44,-1.7 -44,-3.4 -43,-1.3 2,-0.3 -0.798 15.9-167.0-111.3 158.8 6.8 11.4 2.6 79 79 A N E > -CE 33 82B 6 3,-2.7 3,-2.4 -2,-0.3 -46,-0.2 -0.997 37.9-103.5-144.6 151.3 6.3 15.2 2.3 80 80 A Q T 3 S+ 0 0 117 -48,-2.6 -47,-0.1 -2,-0.3 -1,-0.1 0.819 121.9 38.9 -35.7 -44.1 8.5 18.2 1.6 81 81 A Q T 3 S- 0 0 142 -49,-0.2 2,-0.3 -3,-0.0 -1,-0.3 -0.135 130.9 -50.0-110.1 38.1 8.4 19.1 5.3 82 82 A G E < S-E 79 0B 38 -3,-2.4 -3,-2.7 -80,-0.1 2,-0.3 -0.943 75.0 -52.4 138.7-155.1 8.5 15.7 7.1 83 83 A K E -E 78 0B 118 -82,-0.5 2,-0.5 -2,-0.3 -5,-0.2 -0.854 37.3-134.5-121.8 159.3 6.9 12.3 6.9 84 84 A S E -E 77 0B 0 -7,-3.1 -7,-2.1 -2,-0.3 -80,-0.1 -0.968 33.8-103.4-121.9 125.6 3.2 11.2 7.0 85 85 A K E - 0 0 167 -2,-0.5 -8,-0.4 -82,-0.4 2,-0.3 0.307 42.2 -91.8 -41.4 165.2 2.1 8.3 9.1 86 86 A A E - 0 0 54 -10,-0.2 2,-0.4 -81,-0.1 -10,-0.3 -0.622 30.9-154.1 -88.1 136.1 1.2 4.9 7.7 87 87 A A E -E 75 0B 16 -12,-2.8 -12,-2.7 -2,-0.3 2,-0.5 -0.842 16.3-135.9-103.2 147.0 -2.3 4.0 6.7 88 88 A H E -E 74 0B 70 -2,-0.4 2,-0.5 -14,-0.2 -14,-0.2 -0.901 16.3-170.5-115.6 129.7 -3.2 0.3 6.7 89 89 A F E -E 73 0B 26 -16,-3.1 -16,-3.0 -2,-0.5 2,-0.4 -0.954 9.8-170.9-115.1 128.6 -5.1 -1.6 4.1 90 90 A V E +E 72 0B 77 -2,-0.5 2,-0.3 -18,-0.2 -18,-0.2 -0.963 16.8 140.6-125.9 138.7 -6.3 -5.2 4.8 91 91 A F E -E 71 0B 27 -20,-2.2 -20,-3.1 -2,-0.4 2,-0.4 -0.948 37.1-119.3-158.1 178.2 -7.8 -7.7 2.5 92 92 A R E -E 70 0B 153 -2,-0.3 -22,-0.2 -22,-0.2 -25,-0.1 -0.978 23.9-124.4-129.7 147.1 -8.0 -11.4 1.5 93 93 A T - 0 0 1 -24,-2.7 -76,-0.2 -2,-0.4 -26,-0.1 -0.257 32.5-105.6 -79.8 171.7 -7.1 -13.2 -1.7 94 94 A S - 0 0 59 -78,-2.8 -26,-3.2 -26,-0.1 2,-0.4 -0.127 39.8 -87.0 -86.7-171.1 -9.5 -15.5 -3.6 95 95 A A 0 0 63 -28,-0.2 -1,-0.1 1,-0.1 -78,-0.0 -0.814 360.0 360.0-103.7 141.2 -9.5 -19.3 -3.8 96 96 A Q 0 0 202 -2,-0.4 -1,-0.1 -80,-0.0 -2,-0.0 0.951 360.0 360.0 -80.9 360.0 -7.5 -21.2 -6.4