==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 04-JUN-02 1LX8 . COMPND 2 MOLECULE: EXCISIONASE; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; . AUTHOR M.D.SAM,C.PAPAGIANNIS,K.M.CONNOLLY,L.CORSELLI,J.IWAHARA, . 55 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5317.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 12.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 215 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 26.1 2.3 8.6 -13.8 2 2 A Y - 0 0 103 1,-0.0 2,-0.3 42,-0.0 42,-0.2 0.115 360.0-104.7 -85.3-154.5 2.0 6.6 -10.5 3 3 A L - 0 0 29 40,-1.0 40,-0.4 4,-0.0 2,-0.1 -0.995 21.7-123.2-138.9 144.7 -1.3 5.7 -8.8 4 4 A T > - 0 0 58 -2,-0.3 4,-3.6 38,-0.1 5,-0.3 -0.325 41.5 -93.2 -80.0 168.8 -3.1 7.1 -5.7 5 5 A L H > S+ 0 0 32 36,-0.7 4,-2.0 2,-0.2 5,-0.3 0.944 124.1 57.4 -45.8 -55.9 -4.0 5.0 -2.7 6 6 A Q H >> S+ 0 0 131 1,-0.2 4,-1.4 2,-0.2 3,-0.8 0.936 118.2 29.1 -41.9 -68.6 -7.5 4.4 -4.1 7 7 A E H 3> S+ 0 0 108 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.901 109.1 72.3 -64.3 -37.9 -6.3 2.9 -7.4 8 8 A W H 3< S+ 0 0 10 -4,-3.6 3,-0.3 1,-0.3 4,-0.3 0.878 108.0 36.1 -45.4 -38.4 -3.1 1.5 -5.8 9 9 A N H X< S+ 0 0 34 -4,-2.0 3,-1.5 -3,-0.8 -1,-0.3 0.792 101.5 74.1 -86.7 -28.5 -5.4 -1.1 -4.1 10 10 A A H 3< S+ 0 0 58 -4,-1.4 -1,-0.2 -5,-0.3 -2,-0.2 0.686 92.0 61.4 -58.8 -11.4 -7.7 -1.4 -7.1 11 11 A R T 3< S+ 0 0 155 -4,-1.0 -1,-0.3 -3,-0.3 2,-0.2 0.801 86.0 84.9 -85.9 -28.7 -4.8 -3.4 -8.6 12 12 A Q S < S- 0 0 53 -3,-1.5 -3,-0.0 -4,-0.3 0, 0.0 -0.511 74.1-143.6 -73.4 138.2 -4.9 -6.1 -5.9 13 13 A R S S+ 0 0 254 1,-0.3 -1,-0.1 -2,-0.2 -3,-0.1 0.543 98.7 34.1 -79.4 -2.9 -7.4 -8.9 -6.6 14 14 A R S S+ 0 0 202 -5,-0.1 -1,-0.3 2,-0.0 -4,-0.1 -0.398 81.6 150.9-149.6 67.2 -8.2 -9.0 -2.9 15 15 A P - 0 0 49 0, 0.0 2,-0.2 0, 0.0 3,-0.1 -0.030 22.7-159.6 -84.3-168.1 -7.9 -5.6 -1.3 16 16 A R - 0 0 161 1,-0.3 5,-0.1 2,-0.0 -7,-0.0 -0.770 39.6 -34.1-154.2-160.9 -9.8 -4.2 1.8 17 17 A S > - 0 0 74 -2,-0.2 4,-1.1 1,-0.1 -1,-0.3 -0.125 54.8-119.3 -62.7 166.8 -10.9 -1.0 3.5 18 18 A L H >> S+ 0 0 95 2,-0.2 4,-1.9 1,-0.2 3,-1.2 0.976 113.8 50.0 -74.8 -55.9 -8.6 2.0 3.3 19 19 A E H 3> S+ 0 0 146 1,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.830 105.2 62.9 -53.2 -25.2 -8.0 2.5 7.0 20 20 A T H 3> S+ 0 0 13 1,-0.2 4,-1.3 2,-0.2 3,-0.5 0.934 101.5 48.8 -66.8 -40.5 -7.2 -1.3 6.9 21 21 A V H S+ 0 0 51 -4,-1.3 5,-2.4 1,-0.2 6,-0.3 0.956 107.6 48.2 -54.7 -50.1 -0.4 -2.5 6.9 25 25 A V H ><5S+ 0 0 43 -4,-2.3 3,-1.8 1,-0.2 -1,-0.2 0.920 108.2 55.3 -58.9 -40.8 1.8 0.5 6.5 26 26 A R H 3<5S+ 0 0 216 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.930 108.7 47.1 -59.3 -41.4 2.2 0.8 10.3 27 27 A E T 3<5S- 0 0 114 -4,-2.4 -1,-0.3 -5,-0.1 -2,-0.2 0.442 116.4-120.6 -79.4 4.4 3.4 -2.9 10.4 28 28 A S T < 5 + 0 0 80 -3,-1.8 -3,-0.2 -4,-0.2 -2,-0.1 0.920 69.8 138.8 59.1 42.0 5.7 -1.9 7.5 29 29 A R < + 0 0 124 -5,-2.4 21,-2.8 -6,-0.2 2,-0.2 0.774 59.2 57.6 -87.7 -26.4 4.1 -4.5 5.2 30 30 A I E S-A 49 0A 3 -6,-0.3 19,-0.2 19,-0.2 17,-0.1 -0.628 84.2-125.0 -99.3 161.4 4.1 -2.2 2.2 31 31 A F E S+A 48 0A 124 17,-1.1 17,-0.8 1,-0.3 -6,-0.0 -0.900 79.1 23.1-169.1 139.1 7.3 -0.6 0.7 32 32 A P S S- 0 0 48 0, 0.0 -1,-0.3 0, 0.0 12,-0.2 0.486 93.9-120.1 -77.7 143.9 8.5 2.0 0.0 33 33 A P - 0 0 77 0, 0.0 11,-0.2 0, 0.0 -2,-0.1 0.063 35.0 -96.3 -41.8 157.6 6.1 3.9 2.5 34 34 A P - 0 0 15 0, 0.0 2,-0.7 0, 0.0 9,-0.2 -0.237 42.6 -91.4 -74.8 167.5 3.8 6.6 0.9 35 35 A V E -B 42 0B 81 7,-1.5 2,-2.7 1,-0.1 7,-1.1 -0.703 30.5-142.9 -83.9 114.2 4.7 10.3 0.7 36 36 A K E -B 41 0B 148 -2,-0.7 2,-3.9 5,-0.2 5,-0.2 -0.412 19.0-170.9 -74.6 73.7 3.2 11.9 3.8 37 37 A D E > -B 40 0B 56 -2,-2.7 2,-3.6 3,-0.7 3,-1.5 -0.241 63.5 -77.2 -65.6 66.2 2.2 15.1 2.0 38 38 A G T 3 S- 0 0 73 -2,-3.9 -1,-0.2 1,-0.3 -2,-0.1 -0.142 119.9 -7.0 69.5 -52.8 1.4 16.9 5.2 39 39 A R T 3 S+ 0 0 183 -2,-3.6 -1,-0.3 0, 0.0 -2,-0.1 0.466 122.6 75.4-145.1 -25.1 -1.9 14.9 5.3 40 40 A E E < -B 37 0B 98 -3,-1.5 -3,-0.7 -4,-0.0 2,-0.3 -0.291 65.0-139.8 -88.0 178.6 -2.3 13.0 2.0 41 41 A Y E -B 36 0B 93 -5,-0.2 -36,-0.7 -4,-0.1 2,-0.6 -0.869 6.7-158.7-143.8 107.5 -0.5 9.8 1.0 42 42 A L E -B 35 0B 55 -7,-1.1 -7,-1.5 -2,-0.3 2,-1.2 -0.750 10.2-150.4 -88.8 121.5 0.8 9.3 -2.6 43 43 A F - 0 0 5 -2,-0.6 -40,-1.0 -40,-0.4 4,-0.1 -0.708 16.4-146.3 -93.2 92.5 1.4 5.6 -3.3 44 44 A H > - 0 0 100 -2,-1.2 3,-2.9 -12,-0.2 -42,-0.0 -0.128 28.8-106.3 -52.3 153.4 4.2 5.6 -5.9 45 45 A E T 3 S+ 0 0 108 1,-0.3 -1,-0.2 3,-0.0 -2,-0.0 0.620 120.9 68.8 -60.7 -5.5 3.9 2.8 -8.5 46 46 A S T 3 S+ 0 0 51 -14,-0.1 -1,-0.3 2,-0.0 2,-0.3 0.525 75.3 104.6 -90.7 -4.4 6.8 1.3 -6.5 47 47 A A < + 0 0 5 -3,-2.9 2,-0.3 -17,-0.1 -17,-0.0 -0.572 44.6 159.7 -78.0 137.1 4.5 0.6 -3.5 48 48 A V E -A 31 0A 77 -17,-0.8 -17,-1.1 -2,-0.3 2,-0.6 -0.991 44.0-109.2-155.0 147.0 3.5 -3.1 -3.1 49 49 A K E -A 30 0A 91 -2,-0.3 -19,-0.2 -19,-0.2 2,-0.1 -0.667 36.9-149.2 -81.5 122.1 2.2 -5.3 -0.2 50 50 A V - 0 0 78 -21,-2.8 3,-0.0 -2,-0.6 -1,-0.0 -0.481 6.6-156.8 -87.1 162.2 5.0 -7.7 0.9 51 51 A D - 0 0 130 -2,-0.1 -1,-0.2 -21,-0.0 -21,-0.0 0.713 49.2 -68.9-102.2 -92.3 4.2 -11.2 2.2 52 52 A L S S- 0 0 158 2,-0.0 -2,-0.0 0, 0.0 -1,-0.0 0.449 84.9 -49.1-132.9 -76.5 7.0 -12.8 4.5 53 53 A N S S+ 0 0 140 1,-0.1 -3,-0.0 -3,-0.0 0, 0.0 -0.174 99.1 92.6-168.9 62.3 10.2 -13.8 2.8 54 54 A R 0 0 237 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.366 360.0 360.0-160.1 71.7 9.7 -15.9 -0.4 55 55 A P 0 0 197 0, 0.0 -5,-0.0 0, 0.0 -2,-0.0 -0.255 360.0 360.0 -81.3 360.0 9.6 -13.8 -3.7