==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-SEP-12 2LYP . COMPND 2 MOLECULE: CYLR2; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; . AUTHOR M.JAREMKO,L.JAREMKO,H.KIM,M.CHO,C.D.SCHWIETERS,K.GILLER,S.BE . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4467.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 65.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 42.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 116 0, 0.0 2,-0.3 0, 0.0 61,-0.0 0.000 360.0 360.0 360.0-111.3 2.4 5.7 -8.5 2 2 A I - 0 0 23 1,-0.0 2,-0.6 64,-0.0 61,-0.2 -0.536 360.0-143.7 -75.4 130.7 2.0 2.9 -6.0 3 3 A I E -A 62 0A 64 59,-1.8 59,-1.1 -2,-0.3 2,-0.6 -0.860 9.3-150.8-100.3 118.6 1.0 -0.4 -7.4 4 4 A N E +A 61 0A 20 -2,-0.6 57,-0.2 30,-0.3 56,-0.1 -0.797 36.3 144.1 -92.7 119.0 -1.3 -2.4 -5.2 5 5 A N > + 0 0 24 55,-3.0 4,-1.4 -2,-0.6 3,-0.2 -0.155 10.8 137.1-152.5 50.1 -0.9 -6.1 -5.6 6 6 A L H > S+ 0 0 0 1,-0.2 4,-5.2 2,-0.2 5,-0.4 0.891 70.3 66.4 -62.3 -44.1 -1.3 -7.9 -2.3 7 7 A K H > S+ 0 0 68 1,-0.3 4,-4.5 2,-0.2 5,-0.3 0.906 101.6 47.2 -50.8 -43.0 -3.5 -10.5 -3.9 8 8 A L H > S+ 0 0 79 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.915 117.9 42.9 -62.3 -44.2 -0.5 -11.8 -5.9 9 9 A I H X S+ 0 0 10 -4,-1.4 4,-0.8 2,-0.2 -2,-0.2 0.938 120.7 41.2 -66.8 -47.6 1.6 -11.7 -2.8 10 10 A R H ><>S+ 0 0 63 -4,-5.2 5,-3.6 1,-0.2 3,-1.0 0.932 114.5 50.3 -65.5 -47.2 -1.2 -13.2 -0.6 11 11 A E H ><5S+ 0 0 77 -4,-4.5 3,-0.9 -5,-0.4 -1,-0.2 0.741 95.7 76.1 -66.7 -16.1 -2.2 -15.7 -3.3 12 12 A K H 3<5S+ 0 0 129 -4,-1.0 -1,-0.3 -5,-0.3 -2,-0.2 0.919 110.1 26.5 -58.2 -45.5 1.5 -16.5 -3.5 13 13 A K T <<5S- 0 0 85 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.2 0.220 119.6-112.6 -96.2 5.7 1.1 -18.4 -0.2 14 14 A K T < 5 + 0 0 131 -3,-0.9 -3,-0.3 1,-0.2 2,-0.2 0.872 56.2 173.9 58.1 43.2 -2.5 -19.0 -1.1 15 15 A I < - 0 0 38 -5,-3.6 2,-0.3 -6,-0.2 -1,-0.2 -0.508 32.3-115.6 -78.9 141.3 -3.4 -16.7 1.8 16 16 A S > - 0 0 55 -2,-0.2 4,-2.7 1,-0.1 5,-0.2 -0.625 6.9-141.9 -80.3 141.7 -7.1 -16.0 2.0 17 17 A Q H > S+ 0 0 18 -2,-0.3 4,-3.9 1,-0.2 5,-0.2 0.913 104.4 53.8 -64.8 -40.9 -8.2 -12.3 1.6 18 18 A S H > S+ 0 0 58 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.924 112.9 40.6 -60.7 -46.8 -10.8 -12.9 4.3 19 19 A E H > S+ 0 0 85 2,-0.2 4,-2.8 1,-0.2 -2,-0.2 0.952 117.2 49.3 -68.9 -43.4 -8.2 -14.2 6.8 20 20 A L H X S+ 0 0 0 -4,-2.7 4,-3.1 2,-0.3 5,-0.3 0.947 110.1 50.6 -60.2 -46.6 -5.7 -11.6 5.8 21 21 A A H X>S+ 0 0 4 -4,-3.9 5,-2.1 1,-0.3 4,-1.5 0.907 110.4 50.5 -59.3 -37.0 -8.3 -8.9 6.1 22 22 A A H <5S+ 0 0 70 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.3 0.902 110.4 49.8 -65.1 -39.1 -9.0 -10.3 9.5 23 23 A L H <5S+ 0 0 69 -4,-2.8 -2,-0.2 1,-0.2 -1,-0.2 0.895 112.8 46.1 -63.5 -41.7 -5.3 -10.1 10.2 24 24 A L H <5S- 0 0 1 -4,-3.1 -1,-0.2 2,-0.2 -2,-0.2 0.697 107.3-128.5 -72.8 -24.1 -5.3 -6.5 9.0 25 25 A E T <5S+ 0 0 141 -4,-1.5 2,-0.3 1,-0.3 -3,-0.2 0.725 74.5 105.5 76.9 26.0 -8.4 -5.7 11.1 26 26 A V S - 0 0 69 -2,-0.3 4,-1.9 1,-0.1 5,-0.1 -0.416 29.6-136.9 -68.1 140.7 -12.7 -5.3 5.5 28 28 A R H > S+ 0 0 126 1,-0.2 4,-3.2 2,-0.2 5,-0.4 0.892 102.9 58.8 -61.4 -43.9 -11.7 -7.8 2.8 29 29 A Q H > S+ 0 0 142 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.918 106.9 47.9 -55.6 -43.6 -13.7 -5.9 0.1 30 30 A T H > S+ 0 0 54 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.925 111.6 49.6 -62.7 -45.6 -11.6 -2.8 0.9 31 31 A I H >X S+ 0 0 4 -4,-1.9 4,-1.0 1,-0.2 3,-0.6 0.946 115.6 41.5 -63.4 -45.2 -8.3 -4.8 0.7 32 32 A N H 3X S+ 0 0 59 -4,-3.2 4,-0.9 1,-0.2 -1,-0.2 0.783 110.3 61.9 -72.2 -22.0 -9.2 -6.4 -2.6 33 33 A G H 3<>S+ 0 0 16 -4,-1.8 5,-2.4 -5,-0.4 -1,-0.2 0.804 94.2 61.9 -67.4 -34.9 -10.5 -3.0 -3.7 34 34 A I H X<5S+ 0 0 9 -4,-1.5 3,-2.9 -3,-0.6 -30,-0.3 0.950 100.5 51.0 -62.8 -44.6 -7.1 -1.5 -3.3 35 35 A E H 3<5S+ 0 0 18 -4,-1.0 -1,-0.2 1,-0.3 -31,-0.2 0.863 103.4 60.7 -56.4 -37.8 -5.5 -3.7 -5.9 36 36 A K T 3<5S- 0 0 128 -4,-0.9 -1,-0.3 1,-0.1 -2,-0.2 0.564 137.9 -88.8 -68.7 -6.8 -8.4 -2.7 -8.1 37 37 A N T < 5S+ 0 0 134 -3,-2.9 -3,-0.2 1,-0.3 -2,-0.2 0.390 78.8 147.3 111.3 9.3 -7.0 0.9 -7.7 38 38 A K < - 0 0 89 -5,-2.4 -1,-0.3 1,-0.2 -34,-0.0 -0.367 68.5 -64.2 -72.3 151.1 -8.8 2.0 -4.5 39 39 A Y - 0 0 157 1,-0.1 -1,-0.2 -2,-0.0 3,-0.1 -0.045 66.2-109.4 -37.9 126.0 -7.0 4.3 -2.2 40 40 A N - 0 0 54 -3,-0.1 -1,-0.1 1,-0.1 6,-0.0 -0.094 43.1 -81.8 -59.2 161.0 -3.9 2.5 -0.9 41 41 A P - 0 0 26 0, 0.0 -1,-0.1 0, 0.0 6,-0.0 -0.166 54.0 -91.4 -65.5 156.4 -3.7 1.4 2.8 42 42 A S > - 0 0 80 -3,-0.1 4,-2.8 1,-0.1 5,-0.3 0.027 43.1 -94.3 -64.6 173.5 -2.7 3.8 5.6 43 43 A L H > S+ 0 0 147 1,-0.2 4,-1.4 2,-0.2 5,-0.1 0.954 125.4 33.9 -60.2 -49.3 0.9 4.3 6.7 44 44 A Q H > S+ 0 0 126 2,-0.2 4,-3.1 1,-0.2 -1,-0.2 0.873 116.1 56.5 -69.8 -43.4 0.6 1.8 9.6 45 45 A L H > S+ 0 0 18 2,-0.2 4,-3.2 1,-0.2 -2,-0.2 0.947 105.5 50.0 -61.7 -42.9 -1.8 -0.5 7.8 46 46 A A H X S+ 0 0 15 -4,-2.8 4,-2.5 2,-0.2 -1,-0.2 0.932 112.2 49.1 -59.3 -41.1 0.6 -1.0 4.9 47 47 A L H X S+ 0 0 102 -4,-1.4 4,-2.8 -5,-0.3 -2,-0.2 0.928 111.9 49.2 -62.8 -41.5 3.3 -1.8 7.4 48 48 A K H X S+ 0 0 51 -4,-3.1 4,-5.0 2,-0.2 5,-0.4 0.875 106.9 55.1 -62.6 -41.1 0.8 -4.2 9.1 49 49 A I H X S+ 0 0 0 -4,-3.2 4,-3.8 2,-0.2 5,-0.4 0.965 111.1 44.0 -62.3 -45.1 0.0 -5.8 5.8 50 50 A A H X>S+ 0 0 15 -4,-2.5 4,-3.0 2,-0.2 5,-1.1 0.941 119.0 44.6 -60.1 -47.6 3.7 -6.5 5.2 51 51 A Y H <5S+ 0 0 168 -4,-2.8 -2,-0.2 2,-0.2 -1,-0.2 0.957 119.9 39.5 -62.7 -51.5 4.0 -7.7 8.8 52 52 A Y H <5S+ 0 0 66 -4,-5.0 -2,-0.2 1,-0.2 -3,-0.2 0.941 123.6 40.6 -63.3 -48.9 0.8 -9.7 8.7 53 53 A L H <5S- 0 0 5 -4,-3.8 -1,-0.2 -5,-0.4 -2,-0.2 0.834 104.0-135.3 -66.1 -38.1 1.5 -11.0 5.2 54 54 A N T <5 + 0 0 109 -4,-3.0 -3,-0.2 -5,-0.4 -4,-0.1 0.982 61.7 107.8 73.2 71.8 5.2 -11.5 5.9 55 55 A T S > - 0 0 78 0, 0.0 4,-1.4 0, 0.0 3,-0.6 -0.270 39.5-125.1 -57.7 145.2 8.5 -6.8 1.6 57 57 A L H 3> S+ 0 0 52 1,-0.2 4,-3.7 2,-0.2 -8,-0.0 0.876 108.5 64.2 -59.8 -38.5 6.3 -3.8 1.4 58 58 A E H 34 S+ 0 0 146 1,-0.2 4,-0.3 2,-0.2 -1,-0.2 0.854 100.3 50.3 -56.0 -41.4 7.4 -3.3 -2.2 59 59 A D H <4 S+ 0 0 78 -3,-0.6 3,-0.4 2,-0.2 -1,-0.2 0.947 118.9 35.4 -65.1 -49.2 5.8 -6.6 -3.3 60 60 A I H < S+ 0 0 0 -4,-1.4 -55,-3.0 1,-0.3 2,-0.3 0.951 143.5 6.9 -71.3 -45.1 2.4 -5.9 -1.8 61 61 A F E < S-A 4 0A 7 -4,-3.7 2,-0.3 -57,-0.2 -1,-0.3 -0.707 73.2-155.1-139.7 86.7 2.5 -2.2 -2.5 62 62 A Q E -A 3 0A 66 -59,-1.1 -59,-1.8 -3,-0.4 -4,-0.1 -0.449 11.2-149.4 -63.0 116.0 5.5 -1.1 -4.6 63 63 A W - 0 0 162 -2,-0.3 3,-0.4 -61,-0.2 -1,-0.2 0.842 11.2-159.8 -56.8 -39.8 5.8 2.5 -3.6 64 64 A Q - 0 0 81 1,-0.2 2,-1.8 -62,-0.1 -2,-0.1 0.978 17.1-139.0 52.8 62.7 7.1 3.5 -7.0 65 65 A P 0 0 105 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.312 360.0 360.0 -58.8 86.5 8.6 6.7 -5.6 66 66 A E 0 0 199 -2,-1.8 -64,-0.0 -3,-0.4 0, 0.0 -0.691 360.0 360.0 -79.0 360.0 7.8 9.1 -8.4